prot_H-elongata_contig16523.4107.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16523.4107.1
Unique Nameprot_H-elongata_contig16523.4107.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length280
Homology
BLAST of mRNA_H-elongata_contig16523.4107.1 vs. uniprot
Match: D7FLX7_ECTSI (PepX_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLX7_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 7.170e-30
Identity = 57/69 (82.61%), Postives = 64/69 (92.75%), Query Frame = 0
Query:  175 LEETLPYYLHVSGWLDASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPHHISTKSRFDFCTEVSVF 243
            L++ LP+YLHVSGWLDASAHAAVMAF TLPCRG+ELLVGPWNHGGHQHVRPHH++T S+FDF TEVS F
Sbjct:  527 LDKILPFYLHVSGWLDASAHAAVMAFTTLPCRGSELLVGPWNHGGHQHVRPHHVTTLSKFDFKTEVSGF 595          
BLAST of mRNA_H-elongata_contig16523.4107.1 vs. uniprot
Match: A0A835YUK7_9STRA (X-Pro dipeptidyl-peptidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUK7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 6.080e-13
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 0
Query:  175 LEETLPYYLHVSGWLDASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPH-HISTK-SRFDFCTEVSVF 243
            L   L +YLHVSGW+DASA A+++A+ TLPC    LL+GPW HGG QHVR H  + T  + FDF  EVS F
Sbjct:  256 LAAALLHYLHVSGWMDASASASLLAYHTLPCASRALLIGPWTHGGVQHVRLHLDLKTSMATFDFAREVSDF 326          
BLAST of mRNA_H-elongata_contig16523.4107.1 vs. uniprot
Match: A0A7X7Z3S2_9DELT (CocE/NonD family hydrolase n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7Z3S2_9DELT)

HSP 1 Score: 61.2 bits (147), Expect = 6.140e-7
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 0
Query:  179 LPYYLHVSGWLD-ASAHAAVMAFMTLPCRGAELLVGPWNHGGHQHVRPHHISTKSRFDFCTEVSVF 243
            +P Y ++SGW D A  HAAV  F+T+   G+ LL+GPW+HGG   +RP   + +SRFD   EV  F
Sbjct:  312 IPVY-NISGWFDGAYPHAAVKRFLTVENPGSRLLLGPWDHGGADQIRPFDKTVRSRFDLIGEVRRF 376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16523.4107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLX7_ECTSI7.170e-3082.61PepX_C domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A835YUK7_9STRA6.080e-1356.34X-Pro dipeptidyl-peptidase-domain-containing prote... [more]
A0A7X7Z3S2_9DELT6.140e-746.97CocE/NonD family hydrolase n=1 Tax=Myxococcales ba... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16523contigH-elongata_contig16523:1636..6562 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16523.4107.1mRNA_H-elongata_contig16523.4107.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16523 1594..6689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16523.4107.1 ID=prot_H-elongata_contig16523.4107.1|Name=mRNA_H-elongata_contig16523.4107.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=280bp
MDDTSKFTGRTVKCACASQAVHELLVEHGVTMGFSPLPSSAMKTIKVREI
PQTSHRPTQQQRQYRKPSTPLFGKRVGTAFTSAFTSGQERNDDGDGEERG
EETAPLVESDDLARWNGHMGTAGGATEAKTGANAAISGIGAEGLGRGRGV
KMSERGVGGSVKGVVDEGLEEVRTLEETLPYYLHVSGWLDASAHAAVMAF
MTLPCRGAELLVGPWNHGGHQHVRPHHISTKSRFDFCTEVSVFRLPPQTV
FTASTEGRRELKGRSMSMRGRSKRMIVAR*
back to top