mRNA_H-elongata_contig165118.4104.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A6H5J7C6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7C6_9PHAE) HSP 1 Score: 217 bits (553), Expect = 1.030e-68 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QVVYEFLVRFVVSSEVDAKQAKQYVDQA+CLQLV+LFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH
Sbjct: 40 QVVYEFLVRFVVSSEVDAKQAKQYVDQAMCLQLVDLFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 148
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: D7FWJ6_ECTSI (Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B\' beta isoform n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ6_ECTSI) HSP 1 Score: 217 bits (553), Expect = 5.270e-66 Identity = 107/109 (98.17%), Postives = 109/109 (100.00%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QVVYEFLVRFVVSSEVDAKQAKQYVDQA+CLQLV+LFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH
Sbjct: 259 QVVYEFLVRFVVSSEVDAKQAKQYVDQAMCLQLVDLFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 367
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7S0GE31_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GE31_9STRA) HSP 1 Score: 186 bits (471), Expect = 9.040e-56 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 144 QVAYEFFLRFIVSSEVNAKAAKRYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYESERHNGIGELLEILGSIINGFAIPLKKEH 252
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7S1Y370_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1Y370_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.220e-55 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 153 QVAYEFFLRFIVSSEVNAKAAKKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 261
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7R9WZM9_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZM9_9STRA) HSP 1 Score: 185 bits (469), Expect = 5.470e-55 Identity = 89/109 (81.65%), Postives = 98/109 (89.91%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RFVVS+EV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ NAF RFVYE RHNGIGELLEILGSI+NGFA PLK+EH
Sbjct: 97 QVAYEFFLRFVVSAEVNAKVAKKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNAFYRFVYETERHNGIGELLEILGSIINGFAIPLKREH 205
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7S0F7B0_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=5 Tax=Bacillariophycidae TaxID=33850 RepID=A0A7S0F7B0_9STRA) HSP 1 Score: 186 bits (471), Expect = 1.980e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 193 QVAYEFFLRFIVSSEVNAKAAKKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 301
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7S3P3F0_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P3F0_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.440e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 204 QVAYEFFLRFIVSSEVNAKAAKKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 312
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A7S4JT48_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4JT48_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.530e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 206 QVAYEFFLRFIVSSEVNAKAAKKYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 314
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: K0SQ30_THAOC (Serine/threonine protein phosphatase 2A regulatory subunit n=2 Tax=Thalassiosira TaxID=35127 RepID=K0SQ30_THAOC) HSP 1 Score: 186 bits (471), Expect = 2.780e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 209 QVAYEFFLRFIVSSEVNAKAAKKYVDQRFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 317
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Match: A0A1E7EZD0_9STRA (Serine/threonine protein phosphatase 2A regulatory subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EZD0_9STRA) HSP 1 Score: 186 bits (471), Expect = 2.780e-54 Identity = 89/109 (81.65%), Postives = 97/109 (88.99%), Query Frame = 1
Query: 1 QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTILHRVYGKFMMHRAFIRRAVGNAFLRFVYECPRHNGIGELLEILGSIVNGFATPLKKEH 327
QV YEF +RF+VSSEV+AK AK+YVDQ CLQLVELFDSEDPRERDYLKTILHR+YGKFM HR+FIRRA+ N F RFVYE RHNGIGELLEILGSI+NGFA PLKKEH
Sbjct: 211 QVAYEFFLRFIVSSEVNAKAAKKYVDQKFCLQLVELFDSEDPRERDYLKTILHRIYGKFMSHRSFIRRAISNVFYRFVYETERHNGIGELLEILGSIINGFAIPLKKEH 319 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig165118.4104.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig165118.4104.1 >prot_H-elongata_contig165118.4104.1 ID=prot_H-elongata_contig165118.4104.1|Name=mRNA_H-elongata_contig165118.4104.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=109bp QVVYEFLVRFVVSSEVDAKQAKQYVDQALCLQLVELFDSEDPRERDYLKTback to top mRNA from alignment at H-elongata_contig165118:142..1026+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig165118.4104.1 ID=mRNA_H-elongata_contig165118.4104.1|Name=mRNA_H-elongata_contig165118.4104.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=885bp|location=Sequence derived from alignment at H-elongata_contig165118:142..1026+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig165118:142..1026+ >mRNA_H-elongata_contig165118.4104.1 ID=mRNA_H-elongata_contig165118.4104.1|Name=mRNA_H-elongata_contig165118.4104.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=654bp|location=Sequence derived from alignment at H-elongata_contig165118:142..1026+ (Himanthalia elongata Himel1 dioecious)back to top |