prot_H-elongata_contig1649.4090.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1649.4090.1
Unique Nameprot_H-elongata_contig1649.4090.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length173
Homology
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BLAST of mRNA_H-elongata_contig1649.4090.1 vs. uniprot
Match: D8LU91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU91_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 3.730e-57
Identity = 111/173 (64.16%), Postives = 126/173 (72.83%), Query Frame = 0 
Query:    1 MLDAVEFREKEASSFREGARLAEERAHAHEKALASALEQLSDSGVSQSKKLVELADVNEELRQTRAALERAERLVFEQRQEADEXXXXXXXXXXETDALRDKLGQAERKNTELMTKNAAGRLAKKAEGNFGRSSTFCSSFCSCFRSRPTYRRVSSPAMLAAPPGTA--DSPWL 171
            +L A EFREKEA S +E A              ASALEQLSDSGVSQSKKL ELADV +EL+ T+AALERAERLVF+QR+EADE          ET+ALRDKL + ERKNTELM K AAGRLAK+  GNFGRSSTFC+ FCSCFR +P YRRV+SPA  A PPG++  D PWL
Sbjct:   48 LLAAAEFREKEACSMQEKAXXXXXXXXXXXXXXASALEQLSDSGVSQSKKLAELADVTQELKLTKAALERAERLVFDQRREADERQRDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCALFCSCFRGKPAYRRVASPAPFAPPPGSSPGDIPWL 220
[Close]
BLAST of mRNA_H-elongata_contig1649.4090.1 vs. uniprot
Match: A0A6H5KW87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW87_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 8.870e-56
Identity = 111/173 (64.16%), Postives = 127/173 (73.41%), Query Frame = 0 
Query:    1 MLDAVEFREKEASSFREGARLAEERAHAHEKALASALEQLSDSGVSQSKKLVELADVNEELRQTRAALERAERLVFEQRQEADEXXXXXXXXXXETDALRDKLGQAERKNTELMTKNAAGRLAKKAEGNFGRSSTFCSSFCSCFRSRPTYRRVSSPAMLAAPPGTA--DSPWL 171
            +L A E REKEA S +E A              ASALEQLSDSGVSQSKKL ELADV +EL++T+AALERAERLVF+QR+EADE          ET+ALRDKL + ERKNTELM K AAGRLAK+  GNFGRSSTFC+SFCSCFR +P YRRV+SPA  A P G++  DSPWL
Sbjct:  127 LLAAAEVREKEACSMQEKAXXXXXXXXXXXXXXASALEQLSDSGVSQSKKLAELADVTQELKRTKAALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPPLGSSPGDSPWL 299
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1649.4090.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LU91_ECTSI3.730e-5764.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW87_9PHAE8.870e-5664.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..88
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availableCOILSCoilCoilcoord: 96..116

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1649contigH-elongata_contig1649:13306..15279 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1649.4090.1mRNA_H-elongata_contig1649.4090.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1649 12717..15333 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1649.4090.1 ID=prot_H-elongata_contig1649.4090.1|Name=mRNA_H-elongata_contig1649.4090.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=173bp
MLDAVEFREKEASSFREGARLAEERAHAHEKALASALEQLSDSGVSQSKK
LVELADVNEELRQTRAALERAERLVFEQRQEADEKQRAEDRRRAETDALR
DKLGQAERKNTELMTKNAAGRLAKKAEGNFGRSSTFCSSFCSCFRSRPTY
RRVSSPAMLAAPPGTADSPWLT*
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