mRNA_H-elongata_contig1648.4084.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig1648.4084.1
Unique NamemRNA_H-elongata_contig1648.4084.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 3.360e-73
Identity = 119/146 (81.51%), Postives = 134/146 (91.78%), Query Frame = 2 
Query:  170 VFMAISQAAVEEIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGSPISGL 607
            + MA+S AA EEI NM++VP LKDPV I++FEALD+RVG IV+A+LIPDP+HGNKPSRKYLSLVVDLGNEKRRVVSA+RSIVDVEDAIGK VL+AANVEEETILG PSRG+LLS SNFSK+PMPRTLRTVLLGGGGVP GS +SGL
Sbjct:    1 MMMAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.350e-53
Identity = 92/144 (63.89%), Postives = 116/144 (80.56%), Query Frame = 2 
Query:  176 MAISQAAVEEIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGSPISGL 607
            +A+S A  EE  +  +VP L+  V+++ +EALD+RVG IV A+ +PDP+HGNKPSRKYLSLVV LGNE R ++S +R + DVE+AIGK+VL+ AN EEE ILGRPSRGRLL A+N+SK PMPRTLRTVLLGGG VP GS ++GL
Sbjct:   16 VAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 161 bits (407), Expect = 4.290e-44
Identity = 83/144 (57.64%), Postives = 114/144 (79.17%), Query Frame = 2 
Query:  176 MAISQAAVEEIENMD--EVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGSPIS 601
            MA  + AV+E +N+D  ++P +KD V+ +  ++LD+RVG I  ADLIPDPEH  KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NVE++T+LG  S GRLLSASN +++P+PRTLRTVL  GGG+P GSP+S
Sbjct:   61 MAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 96.7 bits (239), Expect = 1.320e-19
Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 2 
Query:  191 AAVEEIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPE---HGNKP--SRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGSPISG 604
            A V E  +    P +K  V  S FE++DVRVG I  A  + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +P GS + G
Sbjct:   77 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 94.4 bits (233), Expect = 8.480e-19
Identity = 60/139 (43.17%), Postives = 81/139 (58.27%), Query Frame = 2 
Query:  191 AAVEEIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPE---HGNKP--SRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGS 592
            A V E  +    P +K  V  S FE++DVRVG I  A  + D E      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VLI ANV    + G  S G +L+  N+   PMPR+ + +L G G +P GS
Sbjct:   49 AEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: L0AB28_CALLD (Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase n=2 Tax=Caldisphaera lagunensis TaxID=200415 RepID=L0AB28_CALLD)

HSP 1 Score: 68.2 bits (165), Expect = 1.620e-10
Identity = 36/103 (34.95%), Postives = 66/103 (64.08%), Query Frame = 2 
Query:  233 LKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSAS-NFSKKPM 538
            L++ +  SEF  +D+RVG ++ A+L+P+       SRK + L+VDLG E+R++++ ++     ED +GK V++ AN++ + + G  S+G +L+A     KKP+
Sbjct:    4 LEEKIDYSEFSKIDLRVGKVISAELVPN-------SRKLIKLIVDLGTEQRQILAGLQKWYKPEDFVGKFVVVVANLKSKIMGGLESQGMILAAPCGDDKKPV 99
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: G0EDL9_PYRF1 (Methionyl-tRNA synthetase, beta subunit n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) TaxID=694429 RepID=G0EDL9_PYRF1)

HSP 1 Score: 67.8 bits (164), Expect = 2.330e-10
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 2 
Query:  239 DPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSA 514
            + +TI EF  +D+RVG +V A+ IP          + L L+VDLGNEKR+++S I      ED IGK V++ AN+  + I G  S G +L+A
Sbjct:    9 EQITIDEFARIDLRVGIVVEAEHIP--------GTRLLRLIVDLGNEKRQIISGIAEWYKPEDLIGKRVVVVANLAPKRIRGYLSEGMILAA 92
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A0A0P0N3E0_9CREN (Methionine--tRNA ligase subunit beta n=1 Tax=Pyrodictium delaneyi TaxID=1273541 RepID=A0A0P0N3E0_9CREN)

HSP 1 Score: 67.0 bits (162), Expect = 4.040e-10
Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 2 
Query:  245 VTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSA 514
            +TI EF  +D+RVG +V A+ IP          + L LVVDLG+EKR+++S I      ED +GK V++ AN++ + I G  S G +L+A
Sbjct:    8 ITIDEFARIDLRVGKVVEAERIP--------GTRLLKLVVDLGSEKRQIISGIAEYYSPEDLLGKKVVVVANLKPKKIRGYLSEGMILAA 89
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 4.820e-10
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 2 
Query:  209 ENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSASN 520
            EN+     LK+ +T  +F  LD+RVG I+ A+ +       + S K L + VD+G EKR++VS+I      ED IGK V+I AN++   ++G  S+G +L+A N
Sbjct:  558 ENLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654
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BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Match: U1PFJ7_9EURY (EMAP domain protein n=1 Tax=Haloquadratum walsbyi J07HQW1 TaxID=1238424 RepID=U1PFJ7_9EURY)

HSP 1 Score: 67.0 bits (162), Expect = 7.940e-10
Identity = 40/104 (38.46%), Postives = 61/104 (58.65%), Query Frame = 2 
Query:  203 EIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEHGNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEETILGRPSRGRLLSA 514
            E E  D  P   + +   EFE LD+RV  I+  + I D +       K   +VVDLG E+R++V+ IR + D++D +G+TV++ AN+E+  I G  S G LL+A
Sbjct:   25 ESEMTDIDPLTDERIDFEEFEKLDLRVAEIIETEPIEDAD-------KLARVVVDLGIEQRQLVAGIRQLHDLDDIVGETVVVVANLEKAEIFGVESNGMLLAA 121
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1648.4084.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI3.360e-7381.51tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA3.350e-5363.89tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP4.290e-4457.64Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.320e-1942.66tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA8.480e-1943.17Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
L0AB28_CALLD1.620e-1034.95Protein containing C-terminal region/beta chain of... [more]
G0EDL9_PYRF12.330e-1041.30Methionyl-tRNA synthetase, beta subunit n=1 Tax=Py... [more]
A0A0P0N3E0_9CREN4.040e-1041.11Methionine--tRNA ligase subunit beta n=1 Tax=Pyrod... [more]
A0A1F8JXF2_9BACT4.820e-1038.46Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
U1PFJ7_9EURY7.940e-1038.46EMAP domain protein n=1 Tax=Haloquadratum walsbyi ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1648contigH-elongata_contig1648:347..4424 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.8
Seed ortholog evalue5.1e-59
Seed eggNOG ortholog2880.D7G8W1
EggNOG free text desc.Putative tRNA binding domain
EggNOG OGs2D3XM@1,2ST4W@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNucleic acid-binding, OB-fold
Ec32 orthologEc-15_004450.1
Exons4
Model size1184
Cds size435
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1648.4084.1prot_H-elongata_contig1648.4084.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig1648 522..3850 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929963.866924-UTR-H-elongata_contig1648:346..5211622929963.866924-UTR-H-elongata_contig1648:346..521Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1648 347..521 +
1691679226.070152-UTR-H-elongata_contig1648:346..5211691679226.070152-UTR-H-elongata_contig1648:346..521Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1648 347..521 +
1622929963.9328833-UTR-H-elongata_contig1648:3850..44241622929963.9328833-UTR-H-elongata_contig1648:3850..4424Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1648 3851..4424 +
1691679226.1199024-UTR-H-elongata_contig1648:3850..44241691679226.1199024-UTR-H-elongata_contig1648:3850..4424Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig1648 3851..4424 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929963.8802185-CDS-H-elongata_contig1648:521..5691622929963.8802185-CDS-H-elongata_contig1648:521..569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 522..569 +
1691679226.0823255-CDS-H-elongata_contig1648:521..5691691679226.0823255-CDS-H-elongata_contig1648:521..569Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 522..569 +
1622929963.8932874-CDS-H-elongata_contig1648:2392..24541622929963.8932874-CDS-H-elongata_contig1648:2392..2454Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 2393..2454 +
1691679226.0916572-CDS-H-elongata_contig1648:2392..24541691679226.0916572-CDS-H-elongata_contig1648:2392..2454Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 2393..2454 +
1622929963.9076283-CDS-H-elongata_contig1648:3128..32781622929963.9076283-CDS-H-elongata_contig1648:3128..3278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 3129..3278 +
1691679226.1003304-CDS-H-elongata_contig1648:3128..32781691679226.1003304-CDS-H-elongata_contig1648:3128..3278Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 3129..3278 +
1622929963.9187074-CDS-H-elongata_contig1648:3675..38501622929963.9187074-CDS-H-elongata_contig1648:3675..3850Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 3676..3850 +
1691679226.1099246-CDS-H-elongata_contig1648:3675..38501691679226.1099246-CDS-H-elongata_contig1648:3675..3850Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig1648 3676..3850 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig1648.4084.1

>prot_H-elongata_contig1648.4084.1 ID=prot_H-elongata_contig1648.4084.1|Name=mRNA_H-elongata_contig1648.4084.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=145bp
MAISQAAVEEIENMDEVPTLKDPVTISEFEALDVRVGCIVVADLIPDPEH
GNKPSRKYLSLVVDLGNEKRRVVSAIRSIVDVEDAIGKTVLIAANVEEET
ILGRPSRGRLLSASNFSKKPMPRTLRTVLLGGGGVPAGSPISGL*
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mRNA from alignment at H-elongata_contig1648:347..4424+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig1648.4084.1 ID=mRNA_H-elongata_contig1648.4084.1|Name=mRNA_H-elongata_contig1648.4084.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4078bp|location=Sequence derived from alignment at H-elongata_contig1648:347..4424+ (Himanthalia elongata Himel1 dioecious)
AGATACCGGCGCGCTGCTCTTCGGCACAGCGGTAATCGCGGTCGTTACTG
CGCCCACCACTTGCCATGCCTTCGTGACTCTGCCGAGGCCTCCGCTTGAC
CCGGTTCCCGCGGCACGTCAACGACAAGGGTTTCACGACACCCTCTCCCG
CGGAAAGGGCCAAGCACCGGTATTCATGGCCATATCCCAAGCAGCAGTGG
AAGAGATAGAGAACATGGACGAGGTGAGTCTCGAACAGTCTGTCATGAAT
ATGATAGACCATTACTGGTGACATTAATATTTTAGACCATTACTGGTGAC
GTTATTATTTTAGACCATTACTGGTGACATTATTATTTTAAACCATTACT
GGTGACATTATTATTTTAGACCATTACTGGTGACATTATCATTTTAGACC
ATTACTGGTGGCATTATTATTTTAGACCATTACTGGTGACATTATTATTT
TAGACCATTACTGGTGACATTATTATTTTAGACCATTACTGGTGACATTA
TTATTTTAGACCATTACTGGTGGCATTATTATTTTAGACCATTACTGGTG
ACATTATTATTTTAGACCATTACTAGTATAATGTATCTATCTTTCTCTCT
GCCATTCTGTAGGAAGTATCTTGAAAGTCCTACTATATGTATTGCTGTCT
GCACAGGTCTCGCGAAGTTTCTTGATAAATTACTCTTCTTTGAGGGTCAA
GGGTGGTTGATAAATCGAAAGGTGGTTGATCAGTCCAGATTTTATTTCTA
GACCATAGTTTATACACCCCGTGAACTAAAGCTCTCAAGATTTTTCAGCT
GTCAAGGCGTCACCCGGGGCATACCGGTAGCTTTGGATACCTCACGCATC
CATCGTACAAACAGCGCAAAAAAATCTTCGTTTTTTTGCTGCTGGAGTTC
CTTGGCGGGAGTTGGTAACGGGGGAGGCACTTTGTGAGGCGGACACTTCG
AGAAGTCCACACCGCTAAGGCACCTTTTCTCTCCAATTCCTTTTGTTCGT
GGTGGATCTATTTTCTTACCTGGTATGGTCGTCATATTTTTATCTTGCTG
TTCCATCAGCCATCTACTGTGTGTAAAGTCGTTTCTCTCCTTGCGTCATG
AAAATTTGGAACTCCTCGTGGTAGGGATGTACCAGCACCAAAGTATTCCA
CTGCCGTCGTCCCCGCCGATTGCTCTCATGCAGACCGGTGTGCCTGTTTA
GGACGACGATGATCTAGGTGGTCCAATGGACGCACTTTGCACCGATTCGT
CGATCGAGTACAAGAATCGACTCATGTCAGCCGTAGGCTGGCTTTCGCCT
AATCTCACCGACAGACAAAACGCCATTTTACGTGCAAAACCCTCTCTAAT
TTGGACACCGCGCCGCTAGTTTAGCTGGTAGCCTAGAGTACAAAATATTG
TAGTTCAGTGTAGCAGTACCAGGTACAGCTGAGTATAGTATAGTATAGTA
TAGTATATAGTAAAGAAACGCACAGCAGTCCGGAGCTCGAATCTCGGAAA
TACTGTTTGTTGCAGCCGAAAGCTTGAAAACTTGAGTAAGTAACCTCTTG
AACATTGGTTGAAGTTGGGTAGGGTTAGGGGGTGCTAAAATTGCATCGCC
GAAGAAAACCCCTTACCGAATGCGGTCGGTGAATAGGAAAAGCGTATGTT
CGAAGGGTTTGTATGAGTTCAGAGTTTTTAAGGCACCCGAGGAGAGATGT
AGACGGAATGGACGGCGTTGCGTTAGCTAGGATTGATAACCTAGTACGTT
CAATGCGGCAGAAATTGAGGTGATGCAGAACGTAAACATCTACTGGTAAA
CGTGGTCCATGAGCCGATTTAAAACATGCCACATCCGAGGTCACTTATGT
GCTTGGTCATTAAACCATACAAGAACGGTGTAGTTTATTCTGATGAGTAC
CAGGAAAATCAGGGGGGGAAACCTTCTCAGGGGACATTTCATCGGCAGCA
AGTGTGGCCGTACACATGGCACTATGTTCTATTGATGATATATTTGCTTG
TGGTGGTATTGAGTGACAGAGGGACTCGACACGTTGCCTGCCGCAGGTAC
CGACGTTGAAGGACCCCGTGACCATCTCGGAATTCGAAGCCCTTGACGTC
CGAGTGGGGTAAGCTATCGACGTGTTATACAGAAGCGTACCTCGACAAAG
GCGCGGGCTGCGGTACTGTAGCTAATACACGAAGGAACGACCGCCCGACG
GCGTCCGCGGAGCTGAAAACATCACACGATTGCTCACGTTCGTGTGGTCA
TACCAAGTCATGCTACGATAATTTATACTGTTTTGTGCGGTGATTGAGCG
GCAGCAGACGACAAAAGTGTAGTATCTCACACGTGATGAATAATGTAAGT
GGACGGGATAATAATGGGATCCATCCCCGACATTATACCGTCGACCCGAT
GAACTTACTAGTGGGGAACACGATTAATCAGACGTGACGATTTTGTGCTC
AAAGGCAGTAATGTACACATTCGAATCTGACGATAGTTGGGTCCCCTGGA
CTGCACCTCTCACGGTGCTAAGAAGGCGTGGATGCTCGGAGGGTTGAAAT
GAGTCCATTAAAAAAAAAATGTAGCTGCCGCCGCTTCCTTCCTCCTCGTG
AGCGTTAGCACCGTGTTTGCACTCTTACACCGCCGTCTGGCTGGCATCTA
CGGCTCTTCAGTTCTTGTGTCGGCGAGAAAGAGTCAACGAAGACACCAAT
TTCTTCCTCTCACCAGCCTGGTACGATGTTGCTAATTGTGTTACGATACT
GAATGTGTTTTATCGCTCTCTCCCTCTACCAGGTGCATTGTAGTGGCGGA
TTTGATACCCGACCCTGAACACGGCAACAAGCCAAGCCGCAAGTACTTGT
CGCTGGTAGTTGATCTTGGGAACGAGAAGCGAAGGGTTGTGAGCGCGATA
AGATCGATCGTCGATGTCGAAGATGCGATAGGGTGAGTACGTGTTCAGCA
GGATAAATCACTGCGGCATATCCTGCTTCTTACGTGGCGCTATGACGAGC
TAGCCTCAGTGTCGTCTTATATTTTTGGACTCGCGTCAGTGGAGTGTTTT
GTTTAGCGTACCTTCCACACGATATGCGACGTCCTCACTTTTTGAGATTC
CTCTTTTCTACCAGCCGAGAATGAACAACGTATCCCCCCCGTGCGAGTCA
TGCCGGACCGAACATCGCTGCTCGTCGCGTTGTGTCAGCAGAAGAGCACA
CTTGCCAAAACGCCTTCCCCATGATGTTCCGAGGCGCGTGAACGTCTCCC
TAAGTGCATGGTTATTACCCTTTTTCCTCTCCCCTCCCCCCCCCACACAC
CACCCTCAACGTCCCCTGTCATCTCTAAGAAAAACGGTGCTCATAGCGGC
AAACGTCGAAGAAGAGACAATTCTGGGGCGACCGAGCCGGGGTCGACTGC
TCTCGGCCTCCAATTTCAGTAAGAAGCCCATGCCAAGAACATTGCGGACC
GTGTTGCTAGGAGGAGGAGGGGTGCCCGCCGGCAGTCCGATTTCTGGTCT
CTGAACACGACTGAAGTCAGCGGTCATGGGGTTACCGAGTAAGACTTGGG
AGTCACTCGGTGTTTTGCCCCCGCAATCTCGTCGGGGCGATTGCTGTGGA
TGTTCTAGAACGACTCTCCTTCCCGCTGTGTACCCACAGACACACGCCTC
AACTGCTCGTTAAGTCGACAACGACATCTACTTTGCGTAGTCGAAGCTGT
CCAGAAATGGGGACCCCCGATGTGTTCGCGCAAAGCATGCGTGCAGTAGG
CGGCTTCGTATATTTGTTTTAAAGAAAATCGAGTGATTTATCCATCGGAA
AAGGGATCCTCATGTTCTGCTCTAGGGTTTTGGACCCTTGAGCGAGATCC
CTCCGCTTTAGGTTATGACTTAGAAATAGAAGCCGGTTTTATAGAGTCCA
TCTCTATGCTGGATTACTGTAGAGGACAGTCTTTTTAGACTTGTTGAGCC
ACCTGGATTCAGTAGTGTGTGTGTTTGTCTTCTCTACTCGTGTTTTGTGC
AGCACGCAAATGAATGAAGATAAAGGATTATAGGGAACCCGCTTGCCATG
AGCATTAATCTACTACCAGAGACCTTGG
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Coding sequence (CDS) from alignment at H-elongata_contig1648:347..4424+

>mRNA_H-elongata_contig1648.4084.1 ID=mRNA_H-elongata_contig1648.4084.1|Name=mRNA_H-elongata_contig1648.4084.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=870bp|location=Sequence derived from alignment at H-elongata_contig1648:347..4424+ (Himanthalia elongata Himel1 dioecious)
ATGGCCATATCCCAAGCAGCAGTGGAAGAGATAGAGAACATGGACGAGAT
GGCCATATCCCAAGCAGCAGTGGAAGAGATAGAGAACATGGACGAGGTAC
CGACGTTGAAGGACCCCGTGACCATCTCGGAATTCGAAGCCCTTGACGTC
CGAGTGGGGTACCGACGTTGAAGGACCCCGTGACCATCTCGGAATTCGAA
GCCCTTGACGTCCGAGTGGGGTGCATTGTAGTGGCGGATTTGATACCCGA
CCCTGAACACGGCAACAAGCCAAGCCGCAAGTACTTGTCGCTGGTAGTTG
ATCTTGGGAACGAGAAGCGAAGGGTTGTGAGCGCGATAAGATCGATCGTC
GATGTCGAAGATGCGATAGGGTGCATTGTAGTGGCGGATTTGATACCCGA
CCCTGAACACGGCAACAAGCCAAGCCGCAAGTACTTGTCGCTGGTAGTTG
ATCTTGGGAACGAGAAGCGAAGGGTTGTGAGCGCGATAAGATCGATCGTC
GATGTCGAAGATGCGATAGGAAAAACGGTGCTCATAGCGGCAAACGTCGA
AGAAGAGACAATTCTGGGGCGACCGAGCCGGGGTCGACTGCTCTCGGCCT
CCAATTTCAGTAAGAAGCCCATGCCAAGAACATTGCGGACCGTGTTGCTA
GGAGGAGGAGGGGTGCCCGCCGGCAGTCCGATTTCTGGTCTCTGAAAAAA
CGGTGCTCATAGCGGCAAACGTCGAAGAAGAGACAATTCTGGGGCGACCG
AGCCGGGGTCGACTGCTCTCGGCCTCCAATTTCAGTAAGAAGCCCATGCC
AAGAACATTGCGGACCGTGTTGCTAGGAGGAGGAGGGGTGCCCGCCGGCA
GTCCGATTTCTGGTCTCTGA
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