mRNA_H-elongata_contig16476.4083.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5L2N4_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L2N4_9PHAE) HSP 1 Score: 397 bits (1020), Expect = 1.100e-136 Identity = 193/295 (65.42%), Postives = 231/295 (78.31%), Query Frame = 1
Query: 4 FHEDIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPD----GAAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTP--FLVLERLDGGTLEKTFERSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREVFVAGG 870
F+E++ L EL EV P +QGGFCVICSC+YRGQ+AVLKI +P GAAQDL+ EI +Y++IS RGGH N+ARAFG+G H QQGE +P FL+LERL GGTLE FERS VWS PIGRLPVA+ELA+A+ FLH A+PGGV+LHRDLKPSNIGLC GH+KVFDLGLSV+R+V + + Y+MSGM G+KRFMAPEVC+GL YNEKVDVYSF +VLWQIC LRKPFAGMSEA H+ QVV GGLRPPLD RW P L L+Q+CWH + RP+M+ + LR++F GG
Sbjct: 7 FNENVTLAELNEVEPFSQGGFCVICSCIYRGQQAVLKIPKPATTSSRSGGAAQDLLREISIYRQISLRGGHPNIARAFGAGTHVQQGETSPSPFLLLERLQGGTLENAFERSTA---VWSDPIGRLPVAIELAEAVAFLHEAAIPGGVVLHRDLKPSNIGLCGAGHIKVFDLGLSVVRQVLEAPTRVYEMSGMAGSKRFMAPEVCTGLSYNEKVDVYSFALVLWQICALRKPFAGMSEADHYLQVVQGGLRPPLDARWPPQLVHLLQACWHVHPDARPTMVQARDTLRQIFAMGG 298
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5JMU8_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMU8_9PHAE) HSP 1 Score: 358 bits (918), Expect = 1.280e-120 Identity = 177/298 (59.40%), Postives = 226/298 (75.84%), Query Frame = 1
Query: 1 MFHEDIPLEELAEVAPLTQGGFCVICSCLYRG-QRAVLKITRPRGPDGAAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLEKTFERSLPLND------VWSSPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSS-SETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREVFVAGG 870
+F +++ L+ L ++ PL GGFC++CSC Y G QRAVLKI +P+GP+ AA DL+AEI +YKRIS RGGH N+A A G+GF +GE PFLVLERL+GG+L E S L W + RLPVALELADA+ +LH +A+PG ILHRDLKP+NIGLC++GHVKVFD GLSV++EVR + ++ YQMSGM G+KRFM+PEVC GL YNEKVDVYSF +VLW+ICTLRKPFAGMS A H+ +V+ GGLRPPLDPRW L L+Q+CWH D + RPS+ + +L+++F+AGG
Sbjct: 46 VFQDNLSLDALTDIQPLDHGGFCIVCSCTYNGVQRAVLKIPKPQGPNSAAADLLAEIAIYKRISARGGHPNIAAALGAGF-TSRGE--PFLVLERLEGGSLAGAIESSRTLGGDAADGGAWVDLVTRLPVALELADALQYLHRDALPG-FILHRDLKPTNIGLCAEGHVKVFDFGLSVVQEVRRGNLNQKYQMSGMAGSKRFMSPEVCKGLPYNEKVDVYSFAIVLWEICTLRKPFAGMSVADHYREVITGGLRPPLDPRWPGALQHLLQACWHEDPDRRPSISEARDVLQQIFLAGG 339
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5K4Q0_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4Q0_9PHAE) HSP 1 Score: 217 bits (553), Expect = 9.720e-65 Identity = 114/297 (38.38%), Postives = 171/297 (57.58%), Query Frame = 1
Query: 13 DIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPR--GPDGAAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERL--------------DGGTLEKTFERSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREV 855
++ ++L + + GG+C + +C+ G++ +KI P+GA DL EI + KR+ H ++ +G+G +GE PFLVLERL D + + ++ L + +G L+L D + +LH E++PGG ++HRDLKPSNIG+ G +KVFD GL+ LRE R ++ Y M+G G++RFMAPEV G+ YNEK D+YS+G+VLW++C L+KPFAGMS H +V G+RPPLD RW L +L++SCWH + RP + L +
Sbjct: 75 NLRFKDLVILEHIANGGYCTVLACMLHGEKRAVKIPLATCSDPEGAVADLTNEIRILKRLR----HPHLCSVYGAGGWRAEGE-LPFLVLERLQYKNLAQQCGTDVDDTSMIVEFKQKKLRAKFRFRKRLG---YGLQLGDLLRYLHSESIPGGFVIHRDLKPSNIGISDDGVLKVFDFGLAKLREQRDPLTDRYVMTGQTGSQRFMAPEVFDGMPYNEKADIYSYGIVLWELCALQKPFAGMSSHEHARKVFRHGVRPPLDKRWPDELKSLLRSCWHAEAEERPDAAQAVETLARI 363
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A835Z8J1_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8J1_9STRA) HSP 1 Score: 199 bits (506), Expect = 2.380e-56 Identity = 113/296 (38.18%), Postives = 162/296 (54.73%), Query Frame = 1
Query: 13 DIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPDGAA--QDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLE-------------KTFERSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREV 855
++ EL+EV L G C I + Y Q V+K+ R D A ++L E+EL R++ + N+ R G+G ++ FL++ERLDGGTL + F+R P N + GR ++AD + +LH EA+PG ++LHRD+KP NIG G K+ DLGL+ +T+ M+G G+ R+MAPEV YNEKVDV+S+GMVLW++ TLRKP+ GM+ + VV G +RPPL+ RW S L+ +CW D RPS V L+E+
Sbjct: 233 EVQWSELSEVEFLVNGSRCTIYTATYNHQACVVKLLRKDAVDAAIVRRELELEMELLMRLN----NENIVRLLGAGIEPER-----FLIIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFNYLELLKCGR-----QIADGLRYLHDEAIPGRIVLHRDIKPDNIGFTKDGDAKLLDLGLAKAVPRSELQDQTFAMTGETGSTRYMAPEVAESRPYNEKVDVHSYGMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLAACWAEDFKARPSFADVCNRLQEM 514
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 195 bits (496), Expect = 6.990e-56 Identity = 114/318 (35.85%), Postives = 168/318 (52.83%), Query Frame = 1
Query: 13 DIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPDGAAQDLIAEIELYKRISWRGGHANVARAFGSGF---------------------HAQQGERTPFLVLERLDGGTL-EKTFERSLPLNDVWSSPIGR------------LPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLS-VLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREV 855
++ EEL +V LT GG C I + +RG+R V+K+ R P+ A +DL EI++ +R+ H N+ G+GF E F++LE L GGTL E R+ P + + SS + R + AL+LA A+ +LH A+ G ++HRDLKP NI G +K+FD GL+ ++R S+ Y+M+G G+ R+M PEV L YNEK DVYSFG++LW++ +LR+PF G++ + V+ GG RPPL WS L LM+ CW D + RP V+ L ++
Sbjct: 39 NLDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQ----HPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLTRNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVVHRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 186 bits (472), Expect = 8.260e-51 Identity = 109/296 (36.82%), Postives = 158/296 (53.38%), Query Frame = 1
Query: 25 EELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPDGAAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLEKTFERSLP-------LNDVWSSP--------IGRLPVALELADAMVFLHHEAVPGGV-ILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREVF 858
E+L + +T+G C I S YRG + V+K+ R P+ A DL E+E + W H ++ + G+G R FLVLE L+ GTL P N + + L A+ELA+A+ +LHH G ++HRDLKP NIG + G +K+FD GL+ + R + Y M+G G+ R+MAPEV L YNEKVDVY+FG++LW++ R+ F GMS +++VV GG+RPPLD W P L L+ CWH D + RP + L++++
Sbjct: 138 EDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELE----VLWGLDHRHIIKLLGAGLREIPPYR--FLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDIY 427
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A835Z8G5_9STRA (Serine/threonine-protein kinase CTR1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8G5_9STRA) HSP 1 Score: 186 bits (471), Expect = 8.500e-51 Identity = 112/306 (36.60%), Postives = 158/306 (51.63%), Query Frame = 1
Query: 28 ELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPDGAA--QDLIAEIELYKRI---------------SWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLE-------------KTFERSLPLNDVWSSPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREV 855
EL++V L G C I + YR V+K+ R PD A ++L E+EL R+ H N+ R G+G ++ FLV+ERLDGGTL + F+R P + + GR +LAD + +LH EA+PG +++HRDLKP NIG G +K+ DLGL+ + M+G G+ R+MAPEV YNEKVDV+S+ MVLW++ TLRKP+ GM+ + VV G +RPPL+ RW S L+ +CW D RPS + L+E+
Sbjct: 281 ELSDVEFLVNGSRCTIYTATYREAACVVKLLRKDVPDAALVRRELELEMELLMRVLVTLXXXXXXXXXXXXXXLKHDNIVRLLGAGDDPER-----FLVIERLDGGTLSQRCGSGGAVRDRRRRFKRKQPFSYLELLRCGR-----QLADGLRYLHDEAIPGRIVIHRDLKPDNIGFNKDGDIKLLDLGLAKAIPRSEVQDAAFHMTGETGSTRYMAPEVAESRPYNEKVDVHSYSMVLWEMATLRKPYDGMARDQFYSAVVRGHVRPPLNKRWPKEFSDLLSACWSEDWRARPSFADICNRLQEM 576
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: B5Y4X7_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y4X7_PHATC) HSP 1 Score: 185 bits (470), Expect = 3.140e-50 Identity = 107/280 (38.21%), Postives = 158/280 (56.43%), Query Frame = 1
Query: 13 DIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPDG--AAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLEKTFERSLPLND----VWS----SPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLS-VLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRP 819
D+ +L V LT GG I + +++G+ V+K +P D A ++ E+ ++ R+ H N+ G+G +G R F+VLERLDGGTL + + D W S + L VA +ADAM + H EA+PG ++LHRDLKP NIG G VK+ D GL+ ++ + S + Y MSG G+ R+MAPEV L YN DVYSFG++LW++ +KPF G++ + +E+VV GG RP L+ +W L++L+ CW D + RP
Sbjct: 371 DLQWRQLHNVEYLTDGGNSWIHTAVFQGKPVVVKTLKPECQDVVLAINEIEGELAVHSRLY----HTNIVALIGAGT-TSKGVR--FVVLERLDGGTLTQMLGYDTRIRDRRRRFWRRKQFSYVDVLRVARSIADAMSYCHQEAIPGCMVLHRDLKPDNIGFTLDGTVKIIDFGLAKIVENASVDSDDIYTMSGETGSLRYMAPEVADALPYNAAADVYSFGIILWEMNATKKPFEGLNRELFYERVVHGGERPSLNRKWPSQLTSLISECWDADMHNRP 643
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5JZF2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZF2_9PHAE) HSP 1 Score: 180 bits (457), Expect = 7.240e-49 Identity = 106/294 (36.05%), Postives = 156/294 (53.06%), Query Frame = 1
Query: 13 DIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRP--RGPDGAAQDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLEKTFERSLPLNDVWS--------SPIGRLPVALELADAMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREVFVA 864
D+ E+L V + G C I + Y V+K+ R + D Q+L E+ L R+ H N+ R G+G + PFL++ERLDGGTL + ++ + D + L L+LA+A+ ++H+EA+PG +++HRDLKP NIG SQG++K+ DLGL + TYQM+G G+ R+MAPEV G YN DVY F M+LW++ T+ KPF M +QVV G+RP + W L+QS WH D + R S++ + LR + A
Sbjct: 278 DVRWEQLTTVEFMVNGSRCTIYTAFYGTTPVVVKVMRKDVQDRDTVRQELELEMGLLMRLR----HPNIVRLLGAGTRPE-----PFLLIERLDGGTLAQRCGNAVKVRDRRRRFRHIRQFTYEELLRQGLQLAEALQYMHNEAMPGKLVVHRDLKPDNIGFDSQGNLKLIDLGLGRVVSKAADDKATYQMTGETGSLRYMAPEVALGKPYNGSADVYGFAMILWEMATMTKPFEMMGREQFLQQVVEKGVRPRVSENWPAPFVKLLQSGWHQDMHKRMSIVEITTTLRSLLEA 562
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Match: A0A6H5JUQ3_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUQ3_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.170e-48 Identity = 113/321 (35.20%), Postives = 163/321 (50.78%), Query Frame = 1
Query: 1 MFHEDIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPDGAA--QDLIAEIELYKRISWRGGHANVARAFGSGFHAQQGERTPFLVLERLDGGTLEKTFERSLPLNDVWS-----------------------------SPIGRLPVALELAD-AMVFLHHEAVPGGVILHRDLKPSNIGLCSQGHVKVFDLGLSVLREVRMSSSETYQMSGMVGTKRFMAPEVCSGLIYNEKVDVYSFGMVLWQICTLRKPFAGMSEAVHFEQVVLGGLRPPLDPRWSPGLSALMQSCWHPDHNFRPSMLAVQQMLREVFVAG 867
M + + EL +V L G C I + +Y+ Q+ V+K+ R D A +L E+ L +R+ H N+ R G+G ++ ER FL++ RLDGGTL + + L D + GRL E+ A+ LH EA+PG +++HRD+KP NIG + G +K+ DLGLS + + + M+G G+ R+MAPEV YNEKVDVYSFG++LW++ TL+KPF GM QV+ G RPP+ +W S LMQSCW D + RPS V +L+ + G
Sbjct: 248 MLNTSVAWAELEDVDFLVNGSRCTIYTAVYKDQQVVVKLMRKDVQDAALVRDELELELALLRRVR----HENIVRLLGAG---KEPER--FLIIARLDGGTLSQRCDHGSRLRDRRGRFKTGKPFSHMQVRRFFTTTQSHAGGHLVAEAGRLFNRKEVQRCALRHLHEEAIPGRMVVHRDVKPDNIGFNADGDLKLLDLGLSKVVSKSEVDNTMFNMTGETGSVRYMAPEVAESRPYNEKVDVYSFGIILWEMSTLKKPFDGMGHDRFLSQVIRGSHRPPVHKKWPKPWSELMQSCWAEDPSKRPSFAKVGDLLQGMLQDG 559 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16476.4083.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16476.4083.1 >prot_H-elongata_contig16476.4083.1 ID=prot_H-elongata_contig16476.4083.1|Name=mRNA_H-elongata_contig16476.4083.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=291bp MFHEDIPLEELAEVAPLTQGGFCVICSCLYRGQRAVLKITRPRGPDGAAQback to top mRNA from alignment at H-elongata_contig16476:3026..4993+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16476.4083.1 ID=mRNA_H-elongata_contig16476.4083.1|Name=mRNA_H-elongata_contig16476.4083.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1968bp|location=Sequence derived from alignment at H-elongata_contig16476:3026..4993+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16476:3026..4993+ >mRNA_H-elongata_contig16476.4083.1 ID=mRNA_H-elongata_contig16476.4083.1|Name=mRNA_H-elongata_contig16476.4083.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1746bp|location=Sequence derived from alignment at H-elongata_contig16476:3026..4993+ (Himanthalia elongata Himel1 dioecious)back to top |