prot_H-elongata_contig16465.4078.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16465.4078.1
Unique Nameprot_H-elongata_contig16465.4078.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length271
Homology
BLAST of mRNA_H-elongata_contig16465.4078.1 vs. uniprot
Match: D8LBK3_ECTSI (SH3 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBK3_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 2.460e-80
Identity = 167/277 (60.29%), Postives = 188/277 (67.87%), Query Frame = 0
Query:    1 MISKRTMKPYLDAWVKTSSEPTWTVKIAPIPSKEIATGTAGKPSHKTDKGKKARIMPPRLLKCAAIPGLRAGDESFGQLTSRRPKLRRSGVFRQLSALAAVTKQEAQLDKSVRRGWTHAGLKLQLLIQGGEACSLKRRSERNVFYKYYAE---DVGEDGDVIGGV--SKALTRRAGYNQMK----YNLEKIVYGRMENLNRENGTKYAVYAKLKEQEKARGRERETENKKKIAGVAGQHKRGGLGXXXXXXXXXXXXXXLHKKSSMFQLEVLAERLE 268
            +ISK+TMKPYLDAW+KTSSEPTWT+K+ PIP KE   G  GKPS K  K              A IPGLRAGDESFGQLTSRRPKLRRS VF ++SALAAVT+QEA L+ S RR WTHAGLKLQLL QGG+ CSLKRRSERN+++KYYAE   D GED D  G    S+ L RR GYNQMK    YNLE++VYGRMENL RE+ TKYA+YAK KEQEK +          K  GV G  KRG  G                KKSS+FQLEVL E+LE
Sbjct:  346 IISKKTMKPYLDAWIKTSSEPTWTLKLPPIPGKEGTGGDGGKPSAKDKKE-------------ATIPGLRAGDESFGQLTSRRPKLRRSRVFGKVSALAAVTRQEAMLETS-RRSWTHAGLKLQLLDQGGDVCSLKRRSERNIYHKYYAEEGPDGGED-DAFGKTAGSRVLMRRGGYNQMKAHMRYNLERVVYGRMENLGRESETKYAMYAKQKEQEKLQ----------KDNGVTGGLKRGITGGGDGGRAGG------QKKSSLFQLEVLTEKLE 591          
BLAST of mRNA_H-elongata_contig16465.4078.1 vs. uniprot
Match: A0A836CBE7_9STRA (SH3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBE7_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.950e-36
Identity = 96/226 (42.48%), Postives = 121/226 (53.54%), Query Frame = 0
Query:    1 MISKRTMKPYLDAWVKTSSEPTWTVKIAPIPSKEIATGTAGKPSHKTDKGKKARIMPPR------------LLKCAA----------------------------IPGLRAGDESFGQLTSRRPKLRRSGVFRQLSALAAVTKQEAQLDKSVRRGWTHAGLKLQLLIQGGEACSLKRRSERNVFYKYYAEDVGEDGDVIGGVSKALTRRAGYNQMKY----NLEKI 182
            MI+ +TMKPYLDAWVKTSSEP WT  + P+PS  +A    G           A++  PR             L+C A                            IPGLR GDE+FG LTSRRP+ RRS  F Q+ ALAAVT+QEA+L+   R+GW+  G+KL LL QGG    L+RRSE+ V+ +YY        D   G +KAL +R  YNQMK+    NLEK+
Sbjct:  315 MINAKTMKPYLDAWVKTSSEPAWTQSLPPLPS--LADAADGGXXXX------AKLPAPRPVPAAAYCCRHASLRCMAPCCGXXXXXXXXXXXXGGPDGAAALKPNIPGLRPGDEAFGLLTSRRPRTRRSDTFAQIGALAAVTRQEARLEVG-RKGWSEEGMKLHLLTQGGTTTGLRRRSEKCVYARYY--------DDASGGAKALLQRGSYNQMKFETRFNLEKV 523          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16465.4078.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LBK3_ECTSI2.460e-8060.29SH3 domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CBE7_9STRA5.950e-3642.48SH3 domain-containing protein n=1 Tax=Tribonema mi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16465contigH-elongata_contig16465:3987..7076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16465.4078.1mRNA_H-elongata_contig16465.4078.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16465 1652..7076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16465.4078.1 ID=prot_H-elongata_contig16465.4078.1|Name=mRNA_H-elongata_contig16465.4078.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=271bp
MISKRTMKPYLDAWVKTSSEPTWTVKIAPIPSKEIATGTAGKPSHKTDKG
KKARIMPPRLLKCAAIPGLRAGDESFGQLTSRRPKLRRSGVFRQLSALAA
VTKQEAQLDKSVRRGWTHAGLKLQLLIQGGEACSLKRRSERNVFYKYYAE
DVGEDGDVIGGVSKALTRRAGYNQMKYNLEKIVYGRMENLNRENGTKYAV
YAKLKEQEKARGRERETENKKKIAGVAGQHKRGGLGGGGGGGGGEEAGGG
LHKKSSMFQLEVLAERLEHA*
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