prot_H-elongata_contig16433.4063.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16433.4063.1
Unique Nameprot_H-elongata_contig16433.4063.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length104
Homology
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Match: A0A7S3NP40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NP40_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 3.950e-6
Identity = 25/64 (39.06%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   35 ILDILAGCMILHLYNNPWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKT 98
            I+ ++   + + ++NNP + PP  +V+ G DA+++Y+DEL++   VI    K+V IG  GAGKT
Sbjct:    9 IVPLMRRGLKVSIFNNPLQEPPEEIVQNGPDAIKRYFDELDRGL-VISKQLKLVLIGHGGAGKT 71          
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Match: A0A6P4Y5Y3_BRABE (malignant fibrous histiocytoma-amplified sequence 1 homolog n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4Y5Y3_BRABE)

HSP 1 Score: 51.6 bits (122), Expect = 2.520e-5
Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 0
Query:   50 NPWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKTRCDQS 103
            NP   PPA V  +GIDA+R+Y+DELE+++  +    KVV +G++ AGKT   Q+
Sbjct:  418 NPLIKPPAEVCRQGIDAIRQYFDELERSEEAVSAHLKVVVLGETMAGKTSLVQT 471          
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Match: A0A8I2K6A8_9BACT (Roc domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A8I2K6A8_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 4.600e-5
Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   45 LHLYNNPWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKT 98
            L+LY NP   PP  +V+KG DA++ Y+DE+E+A  V+F   K++ +G    GKT
Sbjct:  256 LNLYGNPLIDPPEEIVKKGNDAVKNYFDEIERAS-VLFLESKLLLVGSGDVGKT 308          
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Match: A0A6N2JGN8_9CYAN (GTP-binding protein n=1 Tax=Pseudanabaena sp. UWO311 TaxID=2487337 RepID=A0A6N2JGN8_9CYAN)

HSP 1 Score: 50.4 bits (119), Expect = 6.290e-5
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 0
Query:   46 HLYNNPWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKT 98
            +LY NP   PP  +V KG+DA+R+Y+ +LE          K++ IG+ GAGKT
Sbjct:  310 NLYGNPISNPPMEIVNKGMDAIREYFQQLESEGGEYLYEAKLLIIGEGGAGKT 362          
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Match: A0A845Z5J2_9CYAN (Roc domain-containing protein n=1 Tax=Okeania sp. SIO3B3 TaxID=2607804 RepID=A0A845Z5J2_9CYAN)

HSP 1 Score: 50.1 bits (118), Expect = 8.370e-5
Identity = 26/79 (32.91%), Postives = 43/79 (54.43%), Query Frame = 0
Query:   20 ENQLSGLGEGEDAHKILDILAGCMILHLYNNPWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKT 98
            +NQL+ + E       +  L     L+LY NP E PP  + EKGI A+R+Y+ ++++         K++ +G+ GA KT
Sbjct:    2 KNQLTSIPES------ISQLTNLTRLYLYKNPLETPPIEIAEKGIKAIREYFQQIKEEGTDYLYEAKLLIMGEGGAAKT 74          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16433.4063.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A7S3NP40_9STRA3.950e-639.06Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A6P4Y5Y3_BRABE2.520e-546.30malignant fibrous histiocytoma-amplified sequence ... [more]
A0A8I2K6A8_9BACT4.600e-544.44Roc domain-containing protein n=1 Tax=Candidatus A... [more]
A0A6N2JGN8_9CYAN6.290e-543.40GTP-binding protein n=1 Tax=Pseudanabaena sp. UWO3... [more]
A0A845Z5J2_9CYAN8.370e-532.91Roc domain-containing protein n=1 Tax=Okeania sp. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..81
e-value: 3.3E-9
score: 37.8
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16433contigH-elongata_contig16433:3547..6841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16433.4063.1mRNA_H-elongata_contig16433.4063.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16433 3547..6841 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16433.4063.1 ID=prot_H-elongata_contig16433.4063.1|Name=mRNA_H-elongata_contig16433.4063.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=104bp
GPIPNELGKLTSLTTLNLGENQLSGLGEGEDAHKILDILAGCMILHLYNN
PWECPPAPVVEKGIDAMRKYYDELEKAKPVIFDLRKVVFIGQSGAGKTRC
DQS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf