mRNA_H-elongata_contig16425.4061.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-elongata_contig16425.4061.1
Unique Name	mRNA_H-elongata_contig16425.4061.1
Type	mRNA
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)

Homology

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: D7FNC2_ECTSI (C3H1-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC2_ECTSI)

HSP 1 Score: 201 bits (512), Expect = 3.000e-55
Identity = 174/451 (38.58%), Postives = 224/451 (49.67%), Query Frame = 1

Query:    1 QVALAKSDWDLDRASAGVLSTLE-AYDAERPPTPKPCRHLLQGGKCLRSDCAFSHDFASTTXXXXXXXXXXXXXXXXXXXXLDVPLQGQESARVAYELE---VCEAICVRLNNWIAESRCS-----PRVLPYATRLK-----EHEGGSGSDQATEAPSVRGHGHDRSEDGMLDVFATEDFPLLAPKLRASSTSLGSSTGPKKEEAFEPGNRCRD---VLLDAVRTKPASKKRNPGKRGPRGRKTRYAAVNIQALMR-ANPTSGNDGPTDSLNSYSSETASTVTAHEHTQDRPGRQCASGLTQD--AAATTVTSRPTCGISFAEAVGST-----------RQGAVVAE---ALERRDGGDRGNDGTRMPVGSWVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            QVALAKSDW+LDRASA VL  L+ A DA      KPCRHLL  G+C RSDC FSHDFA TT                     D+ +  + +     + E     E           E + S     P +   ATRL      +  G  GS       S +      + D +  V A  D  +  P++   S +       ++EEA E  N  +D   VLL AV + P  ++R  G++G RGRKTR+ AVN+QAL++  +P +    P ++ +                     R+ +SG+ Q      +++++ P  GISFA+ VGS+           R  AV      A  R  G DR         G WVSTG AV  QY+ AR++A ELARARNK FTSATEAFRRG G  ARDLARRGRELN  MKEKH+QAA  IF +RNPGDQV
Sbjct:  160 QVALAKSDWNLDRASAAVLLALQIACDASL--AVKPCRHLLLDGECRRSDCTFSHDFA-TTPCRYWLQGCCVNSSDDCYFMHDLVVPDEAAGFSPPDCEPGITAEESXXXXXXXXDERQLSGVDQFPSLPSTATRLSPPIDGDMVGTEGSAPYQTPSSTKNGVSGVALDTIAAVAAPSDAGVSGPRIGDDSPAT------EREEAEEGWNEKKDDKDVLLAAV-SAPKGQQRGRGRKGGRGRKTRFTAVNLQALLKPGSPHAKTSTPENAFHP--------------------REMSSGIAQQDGGGGSSLSAEP--GISFADVVGSSSCPAGSANGLGRAAAVACPSPYAWRRAVGDDRYPPAVVGGGGEWVSTGDAVGKQYQQAREDAAELARARNKFFTSATEAFRRGDGLLARDLARRGRELNFRMKEKHQQAAEYIFGARNPGDQV 578

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A6H5JKG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKG2_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 4.110e-42
Identity = 156/415 (37.59%), Postives = 188/415 (45.30%), Query Frame = 1

Query:  100 KPCRHLLQGGKCLRSDCAFSHDFASTTXXXXXXXXXXXXXXXXXXXX-LDVPLQ-------GQESARVAYELEVCEAICVRLNNWIAESRCS-----PRVLPYATRLKEHEGGSGSDQATEAPSVRGHGHDRSEDGM-LDVFATEDFPLLAPKLRASSTSLGS-STGPKKEEA--FEPGNRCRDVLLDAVRTKPASKKRNPGKRGPRGRKTRYAAVNIQALMRANPTSGNDGPTDSLNSYSSETASTVTAHEHTQDRPGRQCASGLTQDAAATTVTSRPTCGISFAEAVGSTR--------QGAVVAEALERRDGGDRGNDGTRMPV------GSWVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            KPCRHLL  G+C RSDCAFSHDFA+T                      L VP +       G E  R+A E           ++   E + S     P +    TRL    G         AP            G+ LD  A    P  A     S   +G  S   K+EEA  +       DVLL AV + P   +R  G++G RGRKTR+ AV++QAL++                  S  A T T       R   +  SG+ Q       +     G+SFA+ VGS+          G     A +  D   R     R P       G WVSTG AV  QYE AR++A ELARARNK FTSATEAF+RG G  ARDLARRGRELN  MKEKHRQAA  IF +RNPGDQV
Sbjct:  170 KPCRHLLLDGECRRSDCAFSHDFATTPCRYWLQGCCVNSSDDCYFMHDLVVPNEEAGLSPPGSEPGRMAEESGGGG------DSGSDERQLSGVDQFPSLPSTTTRLPPPIGSEIVGTEGSAPFQTPSSTKNGVSGVALDTIAAVAAPSAAG---VSGPRIGDDSPATKREEAVGWNEKKDNEDVLLAAV-SAPKGPQRGRGRKGGRGRKTRFTAVDLQALLKPG----------------SPHAKTSTPENVFHPR---EVGSGIAQQDGTGGASLSAEPGMSFADVVGSSSCLAGSTNGLGRAAEVACQSPDAWRRAIGDERYPPAVVGGGGEWVSTGDAVGKQYEQAREDAAELARARNKFFTSATEAFQRGDGLLARDLARRGRELNFRMKEKHRQAAEYIFGARNPGDQV 555

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A836CII3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 1.840e-17
Identity = 118/398 (29.65%), Postives = 157/398 (39.45%), Query Frame = 1

Query:  100 KPCRHLLQGGKCLRSDCAFSHDFASTTXXXXXXXXXXXXXXXXXXXXLDVPLQGQESARVAYELEVCEAICVRLNNWIAESRCSPRVLPYATRLKEHEGGSGSDQATEAPSVRGHGHDRSEDGMLDVFATEDFPLLAPKLRASSTSLGSSTGPKKEEAFEPGNRCRDVLLDAVRTKPASKKRNPGKRGPRGRKTRYAAVNIQALMRAN-PTSGNDGPTDSLNSYSSETASTVTAHEHTQDRPGRQC----ASGLTQDAA-----ATTVTSRPTCGISFAEAVGSTRQGAVVAEALERRDGGDRGNDGTRMPVGS----WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            +PCRH L G +CLR DC F+HDFA+T                     L +          A+    C A+   L+  +A  R +P  L  ATR+                +  G       +G   +F  +    L P    ++ +  SS  P  EE         D  L      P  +      RG     +R  ++  Q +   + P  G+ G   S     S T                      A G+ Q A         V S  + G SFA  VGS      +  +  RR   D      R+  G+    WV TG AVA QY+ AR EA ELAR+RN  F SAT A+R G  K+A  LA +GRELN  MKE+HR AA  I+ +RNP  QV
Sbjct:  472 QPCRHYLSG-ECLRRDCMFAHDFATTICRYWLQTAALYATAFERMCRLSL----------AHVSSRCGALL--LSAVVARCRRAPPAL--ATRV--------------FAAAWGRARGTCRNGFTCLFVHD----LEPADAVAAGAAASSVSPTPEE---------DEPLPLSGDAPVYQ------RGSSAATSRKNSIEFQGVFSEDFPALGSGGSQSSPAKTPSRTXXXXXXXXXXXXXXXXXXXXSPAGGVLQLAVEGLSYGPQVPSPVSSGKSFAAVVGSGAS-PQLQPSSSRRGSADSKRGAGRVRGGANSNGWVQTGDAVAAQYKTARSEAAELARSRNGYFMSATRAYRGGDAKSASALAAKGRELNGLMKERHRAAARCIYDARNPQQQV 820

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A3M6VB56_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VB56_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 9.610e-11
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            WVSTG AVA QY   R++A E+A ARNK F  AT+A+R G    A+ L+++G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  429 WVSTGQAVATQYLELREQAYEMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNAKMKHFHFLAASDIFESRNPPNQL 508

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A2P4XU03_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XU03_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 1.430e-10
Identity = 42/89 (47.19%), Postives = 59/89 (66.29%), Query Frame = 1

Query:  988 GTRMPVGS-WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            G+   +G+ WVSTG +VA QY   R++A ++A ARNK F  AT+A+R G    A+ L+++G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  228 GSNESIGTKWVSTGQSVATQYLELREQAYQMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNTKMKHFHFLAASEIFESRNPPNQL 316

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A0P1AEJ2_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AEJ2_PLAHL)

HSP 1 Score: 73.9 bits (180), Expect = 1.620e-10
Identity = 41/80 (51.25%), Postives = 55/80 (68.75%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            WV+TG +V+ QY   R++A E+A ARNK F  AT+A+R G    A+DL+R+G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  396 WVTTGESVSSQYLELREQAHEMACARNKCFMGATQAYRNGNKALAKDLSRQGHEYNVKMKNFHFLAASEIFESRNPPNQL 475

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: D0MT46_PHYIT (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=D0MT46_PHYIT)

HSP 1 Score: 73.9 bits (180), Expect = 1.700e-10
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            WVSTG +VA QY   R++A E+A ARNK F  AT+A+R G    A+ L+++G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  429 WVSTGQSVATQYLELREQAYEMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNAKMKNFHFLAASEIFESRNPPNQL 508

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: G4ZFB7_PHYSP (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=G4ZFB7_PHYSP)

HSP 1 Score: 73.6 bits (179), Expect = 2.280e-10
Identity = 41/80 (51.25%), Postives = 54/80 (67.50%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            WVSTG +VA QY   R++A E+A ARNK F  AT+A+R G    A+ L+++G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  435 WVSTGQSVATQYLELREQAYEMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNVKMKNFHFLAASEIFESRNPPNQL 514

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: A0A225VSJ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VSJ6_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.790e-10
Identity = 40/80 (50.00%), Postives = 53/80 (66.25%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFASRNPGDQV 1251
            WVSTG  VA QY   R++A ++A ARNK F  AT+A+R G    A+ L+++G E N +MK  H  AAS IF SRNP +Q+
Sbjct:  380 WVSTGQNVATQYLELREQAYQMACARNKCFMGATQAYRNGNKALAKGLSKQGHEYNTKMKNFHFLAASEIFESRNPPNQL 459

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BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Match: D8TPR6_VOLCA (Smr domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TPR6_VOLCA)

HSP 1 Score: 70.9 bits (172), Expect = 1.930e-9
Identity = 41/72 (56.94%), Postives = 46/72 (63.89%), Query Frame = 1

Query: 1012 WVSTGTAVALQYEGARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKHRQAASAIFA 1227
            WVSTG AV+ QY   R+EA  LARARN+ F  AT A+  G    A+ L RRGRELNE MK  H  AA  IFA
Sbjct:  547 WVSTGEAVSAQYAEERREAAMLARARNQCFQQATLAYLSGNKALAKQLGRRGRELNEAMKAAHAAAARRIFA 618

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot

BLAST of mRNA_H-elongata_contig16425.4061.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
D7FNC2_ECTSI	3.000e-55	38.58	C3H1-type domain-containing protein n=1 Tax=Ectoca...	[more]
A0A6H5JKG2_9PHAE	4.110e-42	37.59	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A836CII3_9STRA	1.840e-17	29.65	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A3M6VB56_9STRA	9.610e-11	52.50	Uncharacterized protein n=2 Tax=Peronospora effusa...	[more]
A0A2P4XU03_9STRA	1.430e-10	47.19	Uncharacterized protein (Fragment) n=1 Tax=Phytoph...	[more]
A0A0P1AEJ2_PLAHL	1.620e-10	51.25	Uncharacterized protein n=1 Tax=Plasmopara halsted...	[more]
D0MT46_PHYIT	1.700e-10	51.25	Uncharacterized protein n=4 Tax=Phytophthora TaxID...	[more]
G4ZFB7_PHYSP	2.280e-10	51.25	Uncharacterized protein n=18 Tax=Phytophthora TaxI...	[more]
A0A225VSJ6_9STRA	8.790e-10	50.00	Uncharacterized protein n=1 Tax=Phytophthora megak...	[more]
D8TPR6_VOLCA	1.930e-9	56.94	Smr domain-containing protein n=1 Tax=Volvox carte...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig16425	contig	H-elongata_contig16425:30..3638 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	203.4
Seed ortholog evalue	2.1e-49
Seed eggNOG ortholog	2880.D7FNC2
EggNOG free text desc.	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity
EggNOG OGs	KOG2401@1,KOG2401@2759
COG Functional cat.	O
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Hectar predicted targeting category	other localisation
Exons	5
Model size	1251
Cds size	1251
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig16425.4061.1	prot_H-elongata_contig16425.4061.1	Himanthalia elongata Himel1 dioecious	polypeptide	H-elongata_contig16425 30..3638 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622929960.9502678-CDS-H-elongata_contig16425:29..98	1622929960.9502678-CDS-H-elongata_contig16425:29..98	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 30..98 +
1691679224.7958124-CDS-H-elongata_contig16425:29..98	1691679224.7958124-CDS-H-elongata_contig16425:29..98	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 30..98 +
1622929960.9682934-CDS-H-elongata_contig16425:1012..1263	1622929960.9682934-CDS-H-elongata_contig16425:1012..1263	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 1013..1263 +
1691679224.8061745-CDS-H-elongata_contig16425:1012..1263	1691679224.8061745-CDS-H-elongata_contig16425:1012..1263	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 1013..1263 +
1622929960.9850543-CDS-H-elongata_contig16425:1922..2280	1622929960.9850543-CDS-H-elongata_contig16425:1922..2280	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 1923..2280 +
1691679224.8151534-CDS-H-elongata_contig16425:1922..2280	1691679224.8151534-CDS-H-elongata_contig16425:1922..2280	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 1923..2280 +
1622929961.003553-CDS-H-elongata_contig16425:2754..3158	1622929961.003553-CDS-H-elongata_contig16425:2754..3158	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 2755..3158 +
1691679224.8240361-CDS-H-elongata_contig16425:2754..3158	1691679224.8240361-CDS-H-elongata_contig16425:2754..3158	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 2755..3158 +
1622929961.0187707-CDS-H-elongata_contig16425:3469..3638	1622929961.0187707-CDS-H-elongata_contig16425:3469..3638	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 3470..3638 +
1691679224.8332944-CDS-H-elongata_contig16425:3469..3638	1691679224.8332944-CDS-H-elongata_contig16425:3469..3638	Himanthalia elongata Himel1 dioecious	CDS	H-elongata_contig16425 3470..3638 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-elongata_contig16425:30..3638+
coding sequence from alignment at H-elongata_contig16425:30..3638+

protein sequence of mRNA_H-elongata_contig16425.4061.1

>prot_H-elongata_contig16425.4061.1 ID=prot_H-elongata_contig16425.4061.1|Name=mRNA_H-elongata_contig16425.4061.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=417bp
QVALAKSDWDLDRASAGVLSTLEAYDAERPPTPKPCRHLLQGGKCLRSDC
AFSHDFASTTCRYWLHGRCLLSSDCVFRHDLDVPLQGQESARVAYELEVC
EAICVRLNNWIAESRCSPRVLPYATRLKEHEGGSGSDQATEAPSVRGHGH
DRSEDGMLDVFATEDFPLLAPKLRASSTSLGSSTGPKKEEAFEPGNRCRD
VLLDAVRTKPASKKRNPGKRGPRGRKTRYAAVNIQALMRANPTSGNDGPT
DSLNSYSSETASTVTAHEHTQDRPGRQCASGLTQDAAATTVTSRPTCGIS
FAEAVGSTRQGAVVAEALERRDGGDRGNDGTRMPVGSWVSTGTAVALQYE
GARKEAVELARARNKLFTSATEAFRRGQGKTARDLARRGRELNEEMKEKH
RQAASAIFASRNPGDQV

mRNA from alignment at H-elongata_contig16425:30..3638+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-elongata_contig16425.4061.1 ID=mRNA_H-elongata_contig16425.4061.1|Name=mRNA_H-elongata_contig16425.4061.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=3609bp|location=Sequence derived from alignment at H-elongata_contig16425:30..3638+ (Himanthalia elongata Himel1 dioecious)
CAGGTAGCACTGGCGAAGAGCGATTGGGATCTCGATCGGGCGTCGGCGGG
TGTCCTATCGACGCTAGAGGTGAAAACGCCGAAACGCCAGTAGAGGTGTA
CACTAACATTATTGTACGATAAGTGTAATGAGTGCCGAGGATATGGGGTT
CGTCATACCCTTGTGTGTTGGTGGTGACATTTACAGCCTCTTGGAAATAG
AGAAGAATGCTGTTTGCACGAGAATAGGAGCCGCCTGGTCGTCGCGCCCC
TTCGCGTGTGGGTACCAGCGACTCTAGACCACGAGAAACCGACGAAAACG
AGCTGAATGAGCAGCCGATCTCGCGGCTCCCTGAGGGGAGCCACCCTTCC
TTTTGTTTGGCCTCCGTGGGGGCATCCGTTCCTTCAATCTGTGTCAGCTG
TGTCTGTTGTGTCGTTTTCGATCCTCATCGCTATATTGATGTTGATGGTT
GTTGATGTTGATGATAATGATGGGTATTTTTATTTTTAAGCATTGTGGTT
GGTGATGATTTACGCTTTCCGCGTACTCTCATTGTAATTGTAGCTGAAAA
AATACCGCGACGCTCCAATGGTGATTCAGCCATAGGGTCATCAAACGGCT
CACATCTTGGTGACGTCACGTCACCCCCGCTACAGATGACGTGACGCGCG
CACCGCCAGGGATGGATGGTGTATCCAATATCGCCCCAAAACGCCTTATC
GGATCTAGCCACCCGATAAAGGCAGATCAAATCCTTGCCGCGTGACGAGG
ATATCCTTTCTAATACAGCGTATTTTGGCTATGTACCTTATGGTCATGTA
TTTTCATGTGTCATGTATTTTATGCATTATATCAGTTCACGTATCATGTA
CCAGTAATATTTATGTGTCTGATGTAAGTATACAATGGCATTCATATTAT
CACACATACCTGGTATTCAATATGACCGCTATCTTGACGTCACTTGATGA
CGTAACTTCACTGCCTTCATGCGAACAAAATAGGCGTACGACGCGGAGCG
ACCTCCAACACCGAAGCCCTGTCGACATCTGCTGCAGGGGGGAAAATGCC
TCAGGAGCGACTGCGCTTTCAGTCACGATTTTGCCAGCACGACATGTCGG
TATTGGCTGCACGGTCGGTGTCTGCTCTCCAGCGACTGCGTCTTCCGGCA
CGACTTGGACGTGCCCCTCCAAGGGCAGGAGAGCGCACGAGTGGCATACG
AACTCGAGGTATGCGAGGCCATTTGTGTGCGTCTGTGTTTGTACCGCGCT
ATCGGGCCCTATCATGATAGTCGTTATGAGCTACTCGCATTGGTGCCAAT
AGTGGGGGATCAATGATATTTGTTAGGAACACCTATGATCAGACGTGACA
AAGGGGACATACTATCTCTACAGCTTCCCTCTATACTTTATTGTTCTATA
AATAGCCTCGGTGTCTGTCTGTGTATGTGCTTGTTGTGTAGTTTCGTCTC
CCTTGACCCTTGATGACAGCGCGTCTTTCTCGCCGTCCCCACGCTCTGCA
TTTTTTTTTCTATAGTACAAAACCCAACGCTTTAGATATGATGTCGTGGA
TTGTCCGTTGACTGAAACGCCGACCCGCATTTCTTATTTAAAAACATATG
ATCCAATTAAAACCCTCCGATCATCGTGTTTACACCGGCTTCGGCGAAAT
ACTCTACATTCATCATCCGGGGGACTCGATGCCCGATAGGGCAGTAATTC
CGCCGCATATTTTTTCGCCAGCCCTATCAGAGATATGGTTAGGCCATTCG
CTGCTCAGAGAGTAAATTTCCCCGAACGACACGAGATGCATCAACGGCCT
GCCGGATAAACGCTGCCACACCCCCGAAGGCAGATATAAAAATGTCGTAT
TCTTGAGGGTGTACCCATGCACCTCACTGTTACTCTTATATAGAAATAAC
TGGATTGCCGAATCGCGTTGCTCACCTCGAGTCTTACCGTACGCGACGCG
CCTGAAGGAGCACGAGGGCGGGTCAGGGTCAGACCAAGCCACCGAGGCTC
CGAGTGTGCGAGGACATGGCCACGATCGCAGCGAGGATGGTATGCTCGAC
GTTTTCGCTACAGAAGATTTCCCGTTGTTGGCGCCGAAGCTCCGGGCGTC
GTCCACTTCGTTGGGTAGCTCGACCGGACCGAAAAAGGAGGAGGCCTTCG
AACCAGGGAACAGGTGCAGGGACGTCCTGCTGGATGCGGTTAGAACGAAG
CCCGCCTCCAAGAAGAGAAACCCTGGTAAACGAGGGCCGCGGGGCCGCAA
GGTGAGCCTGATATATCTCCATTTCCTATTGATCTTGTAAGACTGCGAGA
CGCTCCGCGTGCCAAGCTTCAGTCGTGGATGCGGGCAGAAGTAGGGTATG
GCTGTCGGTGATGTTCACGCGCGATATCCTATTCATCATTTCTTTGTGGA
CAAAAATATATGTGTGCGCATTGAACCGTTTACCAGAAGTACAACAGCTG
GTGGCTCCATATGCCCACCCGTCCGCCTTCGAAGTCTTGTTGCATTGCGC
TGCCCTACGCACCGTGTCTTCCTTTCCTCTACGATGATGACGGGGTTGAT
GTTGTCGCGAGTTCACTTAATCATCGACAGCATTTCGATGTGCAGCACTT
GCCTCCCTTATCCCCCGGGGTTGATGTTGTGCCCTCCCCTATGTATATAC
CCTTCCAGGGTACCACTGTCTGTGACCCCAAGCCTTCTCACGCCCCCTGT
TACGTCGTTTGCACGGGGTATATAGACGCGCTACGCGGCGGTGAACATCC
AGGCGCTCATGCGGGCAAACCCCACCAGCGGCAACGACGGACCCACCGAC
TCGCTCAACTCATATTCGTCGGAGACCGCGAGCACGGTCACCGCCCACGA
GCACACCCAAGACCGCCCGGGGCGACAATGCGCGAGCGGGCTGACGCAAG
ATGCGGCAGCGACAACCGTGACGTCGAGACCAACCTGCGGAATCTCCTTC
GCGGAAGCGGTTGGGTCGACCAGACAAGGAGCTGTTGTGGCGGAGGCGTT
GGAGAGAAGAGATGGTGGCGATAGAGGTAATGATGGGACTCGGATGCCGG
TAGGCTCGTGGGTTTCTACGGGGACTGCGGTGGCGCTACAGTACGAGGGG
GCGCGTAAGGAGGCTGTGGAACTGGCAAGGTAAGAAGAGCAAGCAGCATG
ATCGCCCGCGTGGGGTGATCGCCTGCGTAAGCAAGGGTTTGGCCTTTCGA
GCGATCTTCCTCGAAGGCCAACGGACGGTGACGAGGGGGGGAGCGGAGCG
GCGGTTTCGGGCATTACCTCGCGGCACCCTTTGGTTGCTTACATATAGCG
CGGTATATTCCAAGTACAATCCCGTACGGCGGTGCGTTGGATTTGGACAA
AACCGCACAATTTTTTAGCATTATCTTAGGGTGGACTGTTGAGGATGACC
TTAATTTGACGCCGATAAATTGTCCCACTGTCTAAAAAAGGGCACGAAAC
AAGCTCTTCACGTCGGCGACGGAGGCGTTCCGCCGCGGACAGGGAAAGAC
CGCCCGAGACCTCGCGAGGCGAGGGCGTGAGCTCAACGAAGAGATGAAGG
AAAAGCACCGCCAAGCGGCGAGCGCCATATTTGCGTCCAGAAATCCGGGC
GACCAGGTC

Coding sequence (CDS) from alignment at H-elongata_contig16425:30..3638+

>mRNA_H-elongata_contig16425.4061.1 ID=mRNA_H-elongata_contig16425.4061.1|Name=mRNA_H-elongata_contig16425.4061.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2502bp|location=Sequence derived from alignment at H-elongata_contig16425:30..3638+ (Himanthalia elongata Himel1 dioecious)
CAGGTAGCACTGGCGAAGAGCGATTGGGATCTCGATCGGGCGTCGGCGGG
TGTCCTATCGACGCTAGAGCAGGTAGCACTGGCGAAGAGCGATTGGGATC
TCGATCGGGCGTCGGCGGGTGTCCTATCGACGCTAGAGGCGTACGACGCG
GAGCGACCTCCAACACCGAAGCCCTGTCGACATCTGCTGCAGGGGGGAAA
ATGCCTCAGGAGCGACTGCGCTTTCAGTCACGATTTTGCCAGCACGACAT
GTCGGTATTGGCTGCACGGTCGGTGTCTGCTCTCCAGCGACTGCGTCTTC
CGGCACGACTTGGACGTGCCCCTCCAAGGGCAGGAGAGCGCACGAGTGGC
ATACGAACTCGAGGTATGCGAGGCCATTTGTGTGCGTCTGCGTACGACGC
GGAGCGACCTCCAACACCGAAGCCCTGTCGACATCTGCTGCAGGGGGGAA
AATGCCTCAGGAGCGACTGCGCTTTCAGTCACGATTTTGCCAGCACGACA
TGTCGGTATTGGCTGCACGGTCGGTGTCTGCTCTCCAGCGACTGCGTCTT
CCGGCACGACTTGGACGTGCCCCTCCAAGGGCAGGAGAGCGCACGAGTGG
CATACGAACTCGAGGTATGCGAGGCCATTTGTGTGCGTCTAAATAACTGG
ATTGCCGAATCGCGTTGCTCACCTCGAGTCTTACCGTACGCGACGCGCCT
GAAGGAGCACGAGGGCGGGTCAGGGTCAGACCAAGCCACCGAGGCTCCGA
GTGTGCGAGGACATGGCCACGATCGCAGCGAGGATGGTATGCTCGACGTT
TTCGCTACAGAAGATTTCCCGTTGTTGGCGCCGAAGCTCCGGGCGTCGTC
CACTTCGTTGGGTAGCTCGACCGGACCGAAAAAGGAGGAGGCCTTCGAAC
CAGGGAACAGGTGCAGGGACGTCCTGCTGGATGCGGTTAGAACGAAGCCC
GCCTCCAAGAAGAGAAACCCTGGTAAACGAGGGCCGCGGGGCCGCAAGAA
ATAACTGGATTGCCGAATCGCGTTGCTCACCTCGAGTCTTACCGTACGCG
ACGCGCCTGAAGGAGCACGAGGGCGGGTCAGGGTCAGACCAAGCCACCGA
GGCTCCGAGTGTGCGAGGACATGGCCACGATCGCAGCGAGGATGGTATGC
TCGACGTTTTCGCTACAGAAGATTTCCCGTTGTTGGCGCCGAAGCTCCGG
GCGTCGTCCACTTCGTTGGGTAGCTCGACCGGACCGAAAAAGGAGGAGGC
CTTCGAACCAGGGAACAGGTGCAGGGACGTCCTGCTGGATGCGGTTAGAA
CGAAGCCCGCCTCCAAGAAGAGAAACCCTGGTAAACGAGGGCCGCGGGGC
CGCAAGACGCGCTACGCGGCGGTGAACATCCAGGCGCTCATGCGGGCAAA
CCCCACCAGCGGCAACGACGGACCCACCGACTCGCTCAACTCATATTCGT
CGGAGACCGCGAGCACGGTCACCGCCCACGAGCACACCCAAGACCGCCCG
GGGCGACAATGCGCGAGCGGGCTGACGCAAGATGCGGCAGCGACAACCGT
GACGTCGAGACCAACCTGCGGAATCTCCTTCGCGGAAGCGGTTGGGTCGA
CCAGACAAGGAGCTGTTGTGGCGGAGGCGTTGGAGAGAAGAGATGGTGGC
GATAGAGGTAATGATGGGACTCGGATGCCGGTAGGCTCGTGGGTTTCTAC
GGGGACTGCGGTGGCGCTACAGTACGAGGGGGCGCGTAAGGAGGCTGTGG
AACTGGCAAGACGCGCTACGCGGCGGTGAACATCCAGGCGCTCATGCGGG
CAAACCCCACCAGCGGCAACGACGGACCCACCGACTCGCTCAACTCATAT
TCGTCGGAGACCGCGAGCACGGTCACCGCCCACGAGCACACCCAAGACCG
CCCGGGGCGACAATGCGCGAGCGGGCTGACGCAAGATGCGGCAGCGACAA
CCGTGACGTCGAGACCAACCTGCGGAATCTCCTTCGCGGAAGCGGTTGGG
TCGACCAGACAAGGAGCTGTTGTGGCGGAGGCGTTGGAGAGAAGAGATGG
TGGCGATAGAGGTAATGATGGGACTCGGATGCCGGTAGGCTCGTGGGTTT
CTACGGGGACTGCGGTGGCGCTACAGTACGAGGGGGCGCGTAAGGAGGCT
GTGGAACTGGCAAGGGCACGAAACAAGCTCTTCACGTCGGCGACGGAGGC
GTTCCGCCGCGGACAGGGAAAGACCGCCCGAGACCTCGCGAGGCGAGGGC
GTGAGCTCAACGAAGAGATGAAGGAAAAGCACCGCCAAGCGGCGAGCGCC
ATATTTGCGTCCAGAAATCCGGGCGACCAGGTCGGCACGAAACAAGCTCT
TCACGTCGGCGACGGAGGCGTTCCGCCGCGGACAGGGAAAGACCGCCCGA
GACCTCGCGAGGCGAGGGCGTGAGCTCAACGAAGAGATGAAGGAAAAGCA
CCGCCAAGCGGCGAGCGCCATATTTGCGTCCAGAAATCCGGGCGACCAGG
TC