prot_H-elongata_contig1642.4057.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig1642.4057.1
Unique Nameprot_H-elongata_contig1642.4057.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length992
Homology
BLAST of mRNA_H-elongata_contig1642.4057.1 vs. uniprot
Match: D8LSG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSG2_ECTSI)

HSP 1 Score: 615 bits (1587), Expect = 1.320e-189
Identity = 444/1097 (40.47%), Postives = 564/1097 (51.41%), Query Frame = 0
Query:    1 NKDRDGGLRFSEMVGMLRGMGTRAPPSATANELDYIRAFKEIGVQTDKNGFVTEDGFVAFYRDFGHLGEDIEESGVASLSSFLGLKLSAVGQIDASAAERLETSLLEEHPRLGRVEKALAFFLRFARDVHLDCFAESIGDWVAPVKGGRNWLRACLLGPGWASRAVERVQQWLADGDQGVIPNFRDAVAEGLGKRWVSAPQDWYAPGGEVLSSLPGC-------ASSDH----------------------RPQSDEETGVGKQL-------------------LFPTSQPPAKPFT----DAATSRGDNASRRDHVFGAAPASEPPSS----------------ICGDDDVGDARPWGQGYEVRTDYDVRWQREGDAERHDTIKRDSTEDPMDSMRAREANDRDIS-----VAAKKRTAVSGDAEENEVLNNNTAFRDKDVAVPKEERVDLADIVVKAGSVQEMEEAADKAEALRTMLTSYVKSKIEADLHHELXXXXXXXXXXKKRLEAAMVAAIARGLRAYDASRSRLEGVATLGVGTHKLTARLQIRGFPFFSLLPAGMGEPAAGRFEKEAREARAEARRRAALDEIDRAKEQQASLITYREQKRAEKQRLKKQKWAMEEIDLYERGMCARQRATTNTNEKDHAQGLWRQLVALRQRRSRGTPGAAAAVNNFGVLLVEQAGRDSVLAAEGRKLLKAAVDMAEVGMRASAGKNYGSGDTVQVITTASSEFIKTPTMDNHLVVDASSAPGEGNAGTDVNTGAVSGAVLQGNAVVGNMRPDFDGEGDEAPTKGGFTLREEWAAIYALFSSNLCFAIEGPGRVSHYKSSNEQESREFRAEIRMQDGNAGNSEGYCTRAS------------------RCENLFSQLPKRVHLVASGSSDSWTCAGVGVTLFDPETPFWWTRPHREAEDEEERNMAENKSGQKLLGDDA-------------MGARRGAVVRNRTAPSGGNDEGRNEGVDYTDLEVLEVLDPARAARIRWRQARQXXXXXXXXXXXXXXXETQRQLQTQEKEAETTHAVGGKPRSP-RRRSVISPKEQEAAEQYDDMVVESKGRFVRAVGAVKALHAR 992
            +KD DGGL +SEMVGMLR MG RA   A   ELDY+   KE+GV+TD+ G+VTEDG VAFYRDFG LG+DIE SGVASL+S LG+K+SAVGQ+DA AAERLE   +EEHP+LGR EKAL+F LRFA D HLDC  ESI DW+AP  G    L+  LL PGWASRAVE +Q+WLADGD+GVIP+FRDA A   G+RW S P  WY PGG++ S +          + SDH                      RP+    T  G ++                   +  T+ P  K  T    D          R  +V   AP+SEP  S                               G   R  +        D  ++  +  + +     S    E            V  ++R  + G  EE     +     ++D  + +E   DL D+ V+ G++ +M+ A +KA+AL+ ML S + SKIE D+  EL           +RL+AA   AIARGLRAYDA+R+RLEGVATLG+GT K+TARLQ+ GFP FSLLPAGMGEP AGR E+ AREARAE RRR ALDEIDRAK++Q            EK RLK+++   EE+DLYERG+ ARQRA T  +EK  A+  WR+LVA+RQRR +GT GAAAAVNN GVLLV+Q+ R+SV AAEGR LL+AAV MAE G R                +  +SE    P+                                             DG+G           ++EW  + ALFSSNL FA EGPGR  +Y  ++E +      +  + +   GN  G                        RC  LF  L     + ASG SDSW C GVGVTLF+PE PFWW R H E ++E ++ +A +K  +   G +                  R AVVRNR       D+G   G  YTDLEVL+V+DP RAARIR RQ R                + QRQL+ Q+KEAE   A   + R     R V + + ++ A++ +       GRFVRA GAVK L AR
Sbjct: 1392 DKDLDGGLSYSEMVGMLRRMGMRATHGAMPTELDYLHTLKEMGVKTDRQGYVTEDGLVAFYRDFGRLGDDIEASGVASLNSLLGVKVSAVGQVDALAAERLEDMTIEEHPQLGRAEKALSFLLRFAVDSHLDCSGESIADWLAPADGDVR-LKEWLLSPGWASRAVEEIQKWLADGDEGVIPSFRDAAAAAFGERWASTPSGWYEPGGDMPSFVAAGLFDGGSESDSDHNNXXXXXXXXXXXXXXXXRHRARPRGTTPTTFGGRVHEQDRRGAGPRGSNTETMSIGLTTPPRTKSSTTVTADTXXXXXXXXXRLRNVT-MAPSSEPSGSNKXXXXXXXXXXXXXXXXXXXXXXXXXXXADGSTTRRLHTTERNNAKDLAQYLGVSEEESHKENGSKTGGEEGRGGRGRGKGGVDGRERAQMDGVREEGGGTESVQTHGNED-EIEREGVPDLEDVFVEEGALGDMKAALEKAKALKAMLASGLPSKIEEDMWKELEIVEEKARGIDERLQAATATAIARGLRAYDAARARLEGVATLGLGTRKVTARLQVTGFPIFSLLPAGMGEPMAGRLEEGAREARAETRRRVALDEIDRAKDRQRREEXXXXXXHLEKLRLKEEEKMQEEVDLYERGLSARQRAATRESEKAEAEKHWRRLVAIRQRRRKGTAGAAAAVNNLGVLLVDQSERESVHAAEGRMLLQAAVAMAEAGSRTH--------------SHPASESKARPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDGQG-----------KKEWEMLLALFSSNLSFATEGPGR--NYDHNDEDQ------DAGVGENGRGNEHGANKEVDDEVXXXXXXXXXXSNVKDRCVALFEGLSPAASVAASGPSDSWECLGVGVTLFEPEDPFWWEREHPEDDEERKQALAAHKLKKSEEGGELEDGHFNDTRRPQETSTTREAVVRNRQV----TDDGEMGG-GYTDLEVLDVIDPGRAARIRIRQTRHKAQQERRQVLLERRKKYQRQLRRQDKEAEAARAASAQTREAYHEREVAARRLKKEADERESR--RRTGRFVRAAGAVKTLRAR 2445          
BLAST of mRNA_H-elongata_contig1642.4057.1 vs. uniprot
Match: A0A6H5KSH1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSH1_9PHAE)

HSP 1 Score: 358 bits (919), Expect = 1.170e-104
Identity = 322/954 (33.75%), Postives = 423/954 (44.34%), Query Frame = 0
Query:   76 VASLSSFLGLKLSAVGQIDASAAERLETSLLEEHPRLGRVEKALAFFLRFARDVHLDCFAESIGDWVAPVKGGRNWLRACLLGPGWASRAVERVQQWLADGDQGVIPNFRDAVAEGLGKRWVSAPQDWYAPGGEVLSSLPGC-------ASSDH----------------------RPQSDEETGVGKQL-------LFPTSQ-----------PPAKPFTDAATSR------GDNASRRDHVFGAAPASEPPSSICGDDDVGDARPW---------------------------------GQGYEVRTDYDVRWQREGDAERHDTIKRDSTEDPMDSMRARE----ANDRDIS-VAAKKRTAVSGDAEENEVLNNNTAFRDKDVAVPKEERVDLADIVVKAGSVQEMEEAADKAEALRTMLTSYVKSKIEADLHHELXXXXXXXXXXKKRLEAAMVAAIARGLRAYDASRSRLEGVATLGVGTHKLTARLQIRGFPFFSLLPAGMGEPAAGRFEKEAREARAEARRRAALDEIDRAKEQQASLITYREQKRAEKQRLKKQKWAMEEIDLYERGMCARQRATTNTNEKDHAQGLWRQLVALRQRRSRGTPGAAAAVNNFGVLLVEQAGRDSVLAAEGRKLLKAAVDMAEVGMRASAGKNYGSGDTVQVITTASSEFIKTPTMDN-------HLVVDASSAPGEGNAGTDVNTGAVSGAVLQGNAVVGNMRPDFDGEGDEAPTKGGFTLREEWAAIYALFSSNLCFAIEGPGRVSHYKS-----------------SNEQESREFRAEIRMQDGNAGNSEGYCTRASRCENLFSQLPKRVHLVASGSSDSWTCAGVGVTLFDPETPFWWTRPHREAEDEEERNMAENK---SGQKLLGDDAM--GARRGAVVRNRTAPSGGNDEGRNEGVDYTDLEVLEVLDPARAARIRWRQAR 909
            V SL+S LG+ LSAVGQ+DA AA+RLE   +EEHP+LGR EKAL+F LRFA D HLDC  ESI DW+AP                             ADGD  VIP+FRDA A   G+RW S P  W+ PGG++ S +          +  DH                      RP+    T  G ++         PT             PP    T   T+       GDN  RR  V   AP+SEP     G + +G                                        G   R  +        D  ++  +  + + + +     RE    A  R    V  ++   + G  EE     +     ++D  + +E   DL D+ V+AG++  M+ A +KA+AL+ ML S + SKIE D+  EL           +RL+AA   AIARGLRAYDA+R+RLEGVATLG+GT                                                                     EK RLK+++   EE+DLYERG+ ARQRA T  +EK  A+  WR+LVA+RQRR +GT GAAAAVNN GVLLV+Q+ RDSV AAEGR LL+AAV MAE G R     ++ + +     +T  S  + TP             V +A++A  EG+A TD                  +   +    G +    GG   +EEW  + ALFSSNL FA EGPGR   +                   +N++E  +       + GN    +G     +RC  LF  L     + ASG SDSW C GVGVTLF+ E PFWW R H E ++E ++ +A +K     +   G+D      RR AVVRNR A   G   G      YTDLEVL+V+DP RAARIR RQ R
Sbjct:  123 VGSLNSLLGVNLSAVGQVDALAAKRLEDMTMEEHPQLGRAEKALSFLLRFAVDSHLDCSGESIADWLAP-----------------------------ADGDVLVIPSFRDAAAAAFGERWRSTPAGWFDPGGDMPSFVAADLNDEGSESDGDHNNGXXXXXXXXXXRGGTRRHLARPRGTTPTTFGGRVHEQERGGAGPTGNKTETMSVVLTTPPRTVSTTTVTAETAGGDSGDNG-RRSKVA-MAPSSEP----SGSNKIGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDANGSMTRRPHTTERNNAKDLAQYLGVSDEESHEGIGGKTGREEGRGARGRGKECVDGQELAQMDGVHEEGGGAESEQPHGNED-KIEQEGVPDLEDVFVEAGALGGMKAALEKAKALKAMLASGLPSKIEEDIRKELEVVEEKARGIDERLQAATATAIARGLRAYDAARARLEGVATLGLGTRXXXXXXXXXXXXL-------------------------------------------------------EKLRLKEEEKMKEEVDLYERGLSARQRAATRESEKAEAEKHWRRLVAIRQRRRKGTAGAAAAVNNLGVLLVDQSERDSVHAAEGRMLLQAAVAMAEAGART---PSHPASEIKAGPSTPPSSAMTTPKPTAPSSADPPQAVAEAATAAAEGHAQTDR-----------------HGESENSESGKDLLVPGG---KEEWEMLLALFSSNLSFATEGPGRNYDHNDXXXXXXXXXXXXXXXXXANKEEGDD-------EVGNESRGQGGSNVKNRCVALFEGLSPAASVAASGPSDSWECLGVGVTLFEREGPFWWEREHLEDDEERKQALAAHKLKKPEEGRGGEDGHLNDTRREAVVRNRQAADDGGTGG-----GYTDLEVLDVIDPGRAARIRIRQTR 950          
BLAST of mRNA_H-elongata_contig1642.4057.1 vs. uniprot
Match: A0A6H5KGV4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGV4_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 6.230e-35
Identity = 73/122 (59.84%), Postives = 89/122 (72.95%), Query Frame = 0
Query:   62 RDFGHL---GEDIEESGVASLSSFLGLKLSAVGQIDASAAERLETSLLEEHPRLGRVEKALAFFLRFARDVHLDCFAESIGDWVAPVKGGRNWLRACLLGPGWASRAVERVQQWLADGDQGV 180
            R  GH+   GE+ + + V SL+S LG+ LSAVGQ+DA AA+RLE   +EEHP+LGR EKAL F LRFA D HLDC  ESI DW+AP  G    L+  LL PGWASRAVE +++WLADGD+GV
Sbjct:    2 RRRGHISFVGEETQTTVVGSLNSLLGVNLSAVGQVDALAAKRLEDMTMEEHPQLGRAEKALPFLLRFAVDSHLDCSGESIADWLAPADGDVR-LKERLLSPGWASRAVEEMKKWLADGDEGV 122          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig1642.4057.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSG2_ECTSI1.320e-18940.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSH1_9PHAE1.170e-10433.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGV4_9PHAE6.230e-3559.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 415..446
NoneNo IPR availableCOILSCoilCoilcoord: 909..937
NoneNo IPR availableCOILSCoilCoilcoord: 532..552
NoneNo IPR availableCOILSCoilCoilcoord: 504..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig1642contigH-elongata_contig1642:9104..15920 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig1642.4057.1mRNA_H-elongata_contig1642.4057.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig1642 9104..15920 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig1642.4057.1 ID=prot_H-elongata_contig1642.4057.1|Name=mRNA_H-elongata_contig1642.4057.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=992bp
NKDRDGGLRFSEMVGMLRGMGTRAPPSATANELDYIRAFKEIGVQTDKNG
FVTEDGFVAFYRDFGHLGEDIEESGVASLSSFLGLKLSAVGQIDASAAER
LETSLLEEHPRLGRVEKALAFFLRFARDVHLDCFAESIGDWVAPVKGGRN
WLRACLLGPGWASRAVERVQQWLADGDQGVIPNFRDAVAEGLGKRWVSAP
QDWYAPGGEVLSSLPGCASSDHRPQSDEETGVGKQLLFPTSQPPAKPFTD
AATSRGDNASRRDHVFGAAPASEPPSSICGDDDVGDARPWGQGYEVRTDY
DVRWQREGDAERHDTIKRDSTEDPMDSMRAREANDRDISVAAKKRTAVSG
DAEENEVLNNNTAFRDKDVAVPKEERVDLADIVVKAGSVQEMEEAADKAE
ALRTMLTSYVKSKIEADLHHELKEAEEKAEEIKKRLEAAMVAAIARGLRA
YDASRSRLEGVATLGVGTHKLTARLQIRGFPFFSLLPAGMGEPAAGRFEK
EAREARAEARRRAALDEIDRAKEQQASLITYREQKRAEKQRLKKQKWAME
EIDLYERGMCARQRATTNTNEKDHAQGLWRQLVALRQRRSRGTPGAAAAV
NNFGVLLVEQAGRDSVLAAEGRKLLKAAVDMAEVGMRASAGKNYGSGDTV
QVITTASSEFIKTPTMDNHLVVDASSAPGEGNAGTDVNTGAVSGAVLQGN
AVVGNMRPDFDGEGDEAPTKGGFTLREEWAAIYALFSSNLCFAIEGPGRV
SHYKSSNEQESREFRAEIRMQDGNAGNSEGYCTRASRCENLFSQLPKRVH
LVASGSSDSWTCAGVGVTLFDPETPFWWTRPHREAEDEEERNMAENKSGQ
KLLGDDAMGARRGAVVRNRTAPSGGNDEGRNEGVDYTDLEVLEVLDPARA
ARIRWRQARQRAQKQRRKAMLERRKETQRQLQTQEKEAETTHAVGGKPRS
PRRRSVISPKEQEAAEQYDDMVVESKGRFVRAVGAVKALHAR
back to top