prot_H-elongata_contig16411.4052.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16411.4052.1
Unique Nameprot_H-elongata_contig16411.4052.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length91
Homology
BLAST of mRNA_H-elongata_contig16411.4052.1 vs. uniprot
Match: D7FH32_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH32_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 3.020e-30
Identity = 56/90 (62.22%), Postives = 70/90 (77.78%), Query Frame = 0
Query:    1 MRTDKDVVGAMQTLGDHDPEGLMKQVDKTRTMRHALVVRYVDCATNSVRQTVALAHPNTPAKELYLMARSIEEKITLRAADWYKNSTLPT 90
            M ++K++ G  QTLGDHDP   M + DKTR MRHALV+RYVDCA+NSV++T A+AHP+ PA +LY MARSIE  IT+R ADW K  +LPT
Sbjct:  263 MYSEKNIHGVTQTLGDHDPGDCMSRWDKTRHMRHALVIRYVDCASNSVKETTAMAHPSIPASQLYEMARSIEANITIRTADWMKCKSLPT 352          
BLAST of mRNA_H-elongata_contig16411.4052.1 vs. uniprot
Match: A0A6H5KA59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA59_9PHAE)

HSP 1 Score: 117 bits (292), Expect = 1.900e-29
Identity = 55/90 (61.11%), Postives = 69/90 (76.67%), Query Frame = 0
Query:    1 MRTDKDVVGAMQTLGDHDPEGLMKQVDKTRTMRHALVVRYVDCATNSVRQTVALAHPNTPAKELYLMARSIEEKITLRAADWYKNSTLPT 90
            M ++KD+ G  QTLGDHDP   M + DKTR MRHALV+RYVDCA++SV +T A+AHP+ PA +LY MARSIE  IT+R  DW K+ +LPT
Sbjct:  173 MYSEKDIDGVTQTLGDHDPGDCMSRWDKTRFMRHALVIRYVDCASHSVLETRAMAHPSVPASQLYEMARSIEANITVRMTDWTKSKSLPT 262          
BLAST of mRNA_H-elongata_contig16411.4052.1 vs. uniprot
Match: D7FWP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWP8_ECTSI)

HSP 1 Score: 105 bits (262), Expect = 2.300e-25
Identity = 47/89 (52.81%), Postives = 68/89 (76.40%), Query Frame = 0
Query:    1 MRTDKDVVGAMQTLGDHDPEGLMKQVDKTRTMRHALVVRYVDCATNSVRQTVALAHPNTPAKELYLMARSIEEKITLRAADWYKNSTLP 89
            ++++KD+ G  QTLGDHDP   M + DKTR MRHALV+RY+DCA+NSV++T  +A  +TPA +LY MAR+I+  IT++A +W  + +LP
Sbjct:  121 LKSEKDINGVTQTLGDHDPGSCMTRWDKTRFMRHALVIRYLDCASNSVQETTLMALASTPASKLYEMARAIDTNITIKANNWLSHKSLP 209          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16411.4052.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FH32_ECTSI3.020e-3062.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KA59_9PHAE1.900e-2961.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FWP8_ECTSI2.300e-2552.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16411contigH-elongata_contig16411:691..2891 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16411.4052.1mRNA_H-elongata_contig16411.4052.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16411 2..3018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16411.4052.1 ID=prot_H-elongata_contig16411.4052.1|Name=mRNA_H-elongata_contig16411.4052.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=91bp
MRTDKDVVGAMQTLGDHDPEGLMKQVDKTRTMRHALVVRYVDCATNSVRQ
TVALAHPNTPAKELYLMARSIEEKITLRAADWYKNSTLPT*
back to top