mRNA_H-elongata_contig16401.4047.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16401.4047.1
Unique NamemRNA_H-elongata_contig16401.4047.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: D8LMN3_ECTSI (CNOT1_TTP_bind domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI)

HSP 1 Score: 751 bits (1939), Expect = 1.090e-260
Identity = 441/603 (73.13%), Postives = 475/603 (78.77%), Query Frame = 1
Query:    4 IQLLQHEVAQAAEEPNFASAICRALEGFGG------------DRVDQPHSRHSGRGGTQGQQGPHRITEEFLLGFSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVARVPGLVTGEGGQLSLEALHSLLELVKTSEEVSAQPHVAKSLLEQIREVHKEGLLAGLLKGGGKEGTEVGGKAARGXXXXXXXXXXXXXXGTAV--------------------SSASWYEADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGGNLAGFLRDLGHTCCSSPAALRQAIRESGVIVDERQIAQVIIMLANNYNNTQGQG-DDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVVYV 1713
            IQLLQHE+AQAA+ PNF SAICRALEG  G            DR +Q H+R  G GG QGQQGPHRITEEFL GF RALKL+P QQVAV LGLSRS N  V++EGVKFLVARVPGLV   GGQL+LEALHSLLELV ++EEV  QP +AKSLLEQIRE H++  L GL    G  G +  G AA  XXXXXXXXXXXXXX                        SS++W EADAL L P FAE ASS G   EMNFLNKT GAMSLAADVAGIAS IG+GG+LAGFLRDLGHTCCS+PAALRQAIRESGV+VDERQ+AQV+ MLANNYN+ +GQG DD E+SSALTSSLFS G G+           GD  +D GG    GQGLWKLEVARQVL ED G RLDW+ VAKA DH+ FNIPDQNALRVLLAL+RG A RD+P EALYM WQNRRGHLSLLR AILAPPQVFTFASSP+KQAPL+ VDP A TPNGAWLSLDLVASLL+LANDTELYAQVRDVFS PAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRN HAAALIRRLWQVN RLVVQSGVKAFNVDSTLPSVVYV
Sbjct:   71 IQLLQHELAQAADRPNFVSAICRALEGSSGVGAGXXXXXXXRDRGEQGHARQRG-GGAQGQQGPHRITEEFLAGFCRALKLSPQQQVAVALGLSRSANAAVAREGVKFLVARVPGLVGAGGGQLNLEALHSLLELVNSNEEVFEQPDLAKSLLEQIREAHQD-YLRGLDGSTGASGGK--GPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSSSAWLEADALALAPLFAEHASSVG---EMNFLNKTQGAMSLAADVAGIASGIGRGGSLAGFLRDLGHTCCSTPAALRQAIRESGVVVDERQVAQVMTMLANNYNSPKGQGGDDGEISSALTSSLFSAGEGKM---------AGDAGRDAGGPAGQGQGLWKLEVARQVLAEDYGPRLDWVAVAKALDHERFNIPDQNALRVLLALYRGPAGRDIPFEALYMQWQNRRGHLSLLRVAILAPPQVFTFASSPSKQAPLEGVDPGAATPNGAWLSLDLVASLLSLANDTELYAQVRDVFSKPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNKHAAALIRRLWQVNARLVVQSGVKAFNVDSTLPSVVYV 657          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A6H5JXN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE)

HSP 1 Score: 743 bits (1919), Expect = 3.260e-241
Identity = 441/633 (69.67%), Postives = 474/633 (74.88%), Query Frame = 1
Query:    4 IQLLQHEVAQAAEEPNFASAICRALEGFGG------------DRVDQPHSRHSGRGGTQGQQGPHRITEEFLLGFSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVARVPGLVTGEGGQLSLEALHSLLELVKTSEEVSAQPHVAKSLLEQIREVHKEGLLAGLLKGGGKEGTEVGGKAARGXXXXXXXXXXXXXXGTA--------------------------------------------------VSSASWYEADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGGNLAGFLRDLGHTCCSSPAALRQAIRESGVIVDERQIAQVIIMLANNYNNTQGQG-DDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVVYV 1713
            IQLLQHE+AQAA+ PNF S ICRALEG  G            DR +Q H+R  G GG QGQQGPHRITEEFL GF RALKL+P QQVAV LGLSRS N  VS+EGVKFL ARVPGLV   GGQLSLEALHSLLELV ++EEVS QP +AKSLLEQIRE H++  L GL    G  G   GGK    XXXXXXXXXXX  XG                                                     SS++W EADAL L P FAE ASS G   EMNFLNKT GAMSLAADVAGIAS IG+GG+LAGFLRDLGHTCCS+PAALRQAIRESGV+VDERQ+AQV+ MLANNYN+ +GQG DD ++SSALTSSLFS G G+           GD  +D GG    GQGLWKLEVARQVL ED G RLDW+ VAKA DH+ F+IPDQNALRVLLAL+RG A RD+PSEALYM WQNRRGHLSLLR AILAPPQVFTFASSP+KQAPLD VDP+A TPNGAWLSLDLVASLL+LANDTELYAQVRDVFS PAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRN HAAALIRRLWQVN RLVVQSGVKAFNVDSTLPSVVYV
Sbjct:   71 IQLLQHELAQAADRPNFVSTICRALEGSSGVGAGXXXXXXXRDRGEQGHARQRG-GGAQGQQGPHRITEEFLAGFCRALKLSPQQQVAVALGLSRSANAAVSREGVKFLFARVPGLVGAGGGQLSLEALHSLLELVNSNEEVSEQPDLAKSLLEQIREAHQD-YLRGL---DGSTGAS-GGKGPAAXXXXXXXXXXXGSXGDQQQXXKXPXXXXXXXXXGGXXXXXXXXXXXXXXXXXXXXXXXXGXXXXXXXXSSSAWLEADALALAPLFAEHASSVG---EMNFLNKTQGAMSLAADVAGIASGIGRGGSLAGFLRDLGHTCCSTPAALRQAIRESGVMVDERQVAQVMTMLANNYNSPKGQGGDDGDISSALTSSLFSAGEGKM---------AGDAGRDAGGPAGQGQGLWKLEVARQVLAEDYGPRLDWVAVAKALDHERFHIPDQNALRVLLALYRGPAGRDIPSEALYMQWQNRRGHLSLLRVAILAPPQVFTFASSPSKQAPLDGVDPNAATPNGAWLSLDLVASLLSLANDTELYAQVRDVFSKPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNKHAAALIRRLWQVNARLVVQSGVKAFNVDSTLPSVVYV 685          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A835ZHM2_9STRA (CCR4-Not complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.030e-96
Identity = 230/583 (39.45%), Postives = 312/583 (53.52%), Query Frame = 1
Query:   10 LLQHEVAQAAEEPNFASAICRALEGFGGDRVDQPHSRHSGRGGTQG-----QQGPHRI-----TEEFLLGFSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVARVPGLVTGEGGQLSLEALHSLLELVKTSEEVSAQPHVAKS--LLEQIREVHKEGLLAGLLKGGGKEGTEVGGKAARGXXXXXXXXXXXXXXGTAVSSASWYEADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGGNLAGFLRDLGHTCCSSPAALRQAIR-ESGVIVDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAV-TPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDST-LPSVVYV 1713
            LLQHEVAQAA   NF S +C+ALEG          +  + RGG+ G      +GPH++     T ++L   ++ALKL+ PQ +A+GLGL+++ + G   E  +FL AR   L  G  G LS   L +LL  +   +  S     A++  ++ ++R+VH+   L G+   G                              A ++ S    D L L P F E A      GEMN+L ++  A +L  D+A ++ +I                              ESGV  DERQ+A+++ +LA  +      G D +LSS LT SL    AG          +      DV GG       W LEV RQVL  D   +L+W LVA+A DHD F+IPDQ  L VLL L+R AA  D+P + ++  W NRRGHLSLLR  I APPQ+++FA+SP +QA L+ +D +A  TPN AWLSLDLVA LL LA D EL+A +R+  +  AY CPELLLLALAA+P  AGG+LR E+L+RLLP YFRPNR     AL+RRL  VNP L   S  + F+ D+  LP++ +V
Sbjct:   75 LLQHEVAQAAGSANFVSLLCQALEG----------AAAAARGGSNGGPADDAEGPHQLQVPPLTADYLTALTKALKLSLPQSIALGLGLAQAQSEGTRTEAARFLKARSAELAAGGSGVLSAAVLQALLVHLLNVDAASDGKDAAQTQDVVRKLRDVHQA--LIGVANSG-----------------------------NASTNGSGAPLD-LSLTPLFVEHA------GEMNYLGRSGAAAALRGDLAALSGAIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESGVAADERQVARLLALLAREHQRAPRGGGDADLSSVLTGSLL---AGXXXXXXXXXRE------DVSGGT------WNLEVVRQVLVADYASKLNWQLVARALDHDDFDIPDQAGLAVLLQLYRSAAQADLPPDVVFGRWANRRGHLSLLRALIAAPPQLYSFAASPQRQAALEGMDAAAAGTPNEAWLSLDLVAVLLALAADAELFATIRETLAAAAYACPELLLLALAAMPPVAGGALRKELLARLLPRYFRPNRAPLLTALLRRLHAVNPHLFRNSCEEVFHADAAGLPTLTHV 594          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: W7TUR4_9STRA (Ccr4-not transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA)

HSP 1 Score: 232 bits (591), Expect = 7.670e-62
Identity = 177/582 (30.41%), Postives = 284/582 (48.80%), Query Frame = 1
Query:    1 QIQLLQHEVAQAAEEPNFASAICRALEGFGGDRVDQPHSRHSGRGGTQGQQGPHRITEEFLLG-FSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVARVPGLV--------TGEGGQLSL----EALHSLLELVKTSEEVSAQPHVAKSLLEQIREVHKEGL----LAGLLKGGGKEGTEVGGKAARGXXXXXXXXXXXXXXGTAVSSASWYEADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGGNLAGFLRDLGHTCCSSPAALRQAIRESGVIVDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALF-RGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDST 1692
            Q+ LL  E+  ++++PNF S I +AL       ++ P S                I + F++   +  LKL P Q  A+ +GLSR P+  V++E  K L AR+  L+        T  GG+ +L    + LH+LL +++++EE  + P  A++LL+ ++    E      L  LL     +  ++                     GT  +SA+                                     LA +   + ++I    ++AGF++DLG  C +S  A R+ ++ESGV +DERQ A ++ ++ + +     +      +  L S+  +T +G  R +   ++D G+R        SA    W L+V   VL  D    LDW  VA   D+    I DQ ALR LL+L+ R A++R  P   L+ PW N+ G LS +  AI APP + +F+     Q PLD+       PN AWLS+DL+A+LL+ + +T L+   R +F  P  QCPE+L+  LA V  ++ G LR E+L+ L PLYF+P R+ HA A+I+R+ Q NP+L+V++ V+ F  + +
Sbjct:   74 QLVLLAEELVTSSQKPNFVSIITQALG------LNSPTSIAG-------------IDQHFVVASLAPTLKLDPSQSTALSVGLSRVPSSQVAQEAYKILRARLQELLASAASLPSTTLGGKNTLTLGDDVLHALLVVLRSNEEYISNPKAAQTLLKMLKNTQPEATSALSLLPLLDAENHDPADL-------------------TTGTPTASAATSRL---------------------------------LAREAENMTNAIALSSHIAGFVQDLGPVCTASTEAFRETLKESGVAMDERQAALLLCLVVDRHTEHDNEMSAMAANELLPSTASTTASGNGRGNEGGEVDTGNR-------ESASPRSWNLDVMASVLAADYSS-LDWARVALELDNPRLFIADQEALRNLLSLYQRAASNRPFPLGVLFRPWTNKVGQLSFIHQAIAAPPDLVSFSGIGRMQNPLDDTQIPQGPPNKAWLSIDLIATLLSFS-ETSLWYSARTLFDGPLRQCPEILICGLACV-EDSWGKLRSELLALLGPLYFQPGRSPHAVAVIKRVHQTNPKLLVETLVERFRQEES 574          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: M4BL28_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BL28_HYAAE)

HSP 1 Score: 196 bits (497), Expect = 1.370e-49
Identity = 167/574 (29.09%), Postives = 246/574 (42.86%), Query Frame = 1
Query:    4 IQLLQHEVAQAAEEPNFASAICRALEGFGGDRVDQPHSRHSGRGGTQGQQGPHRITEEFLLGFSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVARVPGLVTGEGGQLSLEALHSLLELVKTSEEVSAQPHVAKSLLEQIREVHKEGLLAGLLKGGGKEGTEVGGKAARGXXXXXXXXXXXXXXGTAVSSASWYEADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGGNLAGFLRDLGHTCCSSPAALRQAIRESGVI----VDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
            IQLL HEVAQA+  PNF + IC A+EG   D VD                G   +TEEFL  F +ALKL+ PQQV VGL  ++  N   S E + FL A++P  ++  G +L  + LHSL+ +++  +E         S L  I   H   +       G  E T +                        +S   + + + +                 + + LNK             + S +         + D+G++C SS  A R  + E+G+     +    +A ++ ML+  +     Q                     A     L +D      D        +  W LEV   VL +D G  + W  VA+  D    NI + + LRVL+  F+  +        L  PW+N R H+S+LR A+ APP+V +FA SP K AP +  D SAV  NG W SLD+V +LL L+   + Y  VR +       CP++L+  LA   S    +LR ++ S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:   65 IQLLTHEVAQASSRPNFTTFICEAIEGSASDAVDA---------------GERHVTEEFLQLFCKALKLSLPQQVTVGLAFAQGENAKSSIEAIHFLRAKIPE-ISSCGAKLPSDVLHSLVFVLRMKKEFRVDVAETDSFLASISSAHPNDM-------GSLEMTPL-----------------------TMSDPEYVDCEPVT----------------DPDALNK-------------LISDVSSSCLFYELMEDVGYSCTSSSQAFRTLLAEAGLAKSPTIPPTHVAGMLAMLSRTFTGLDAQNG-------------------ATLIANLTIDFEASPLDEAAATPVRES-WDLEVIADVLEKDYGS-IKWTKVAEKLDRADLNIQNVSQLRVLITAFQRFSQTKFHVTTLLRPWKNSRAHISILRAAVEAPPEVLSFAESPHKLAPFEGADASAVPKNGVWFSLDVVETLLQLSLQ-DCYGDVRKLLDEAMKTCPDVLIANLAQA-SPRWNALREDIFSELFSSYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 535          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A3M6VNB3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VNB3_9STRA)

HSP 1 Score: 151 bits (382), Expect = 8.350e-35
Identity = 106/321 (33.02%), Postives = 160/321 (49.84%), Query Frame = 1
Query:  763 FLRDLGHTCCSSPAALRQAIRESGVI----VDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
             + D+G++C SSP ALR  + E+G+     +   Q+A ++ ML+  Y      G+   L + LT    +T       H    + V D               W LEV  +VL +D G  + W  VA+  D    NI + + LRVL+  F+  +        L  PW+N R H+S+L+ A+ APP+V +F+ SP K AP +  D SAV  NG W S+D+V +LL ++ + + Y  VR +       CP++L+  LA   S    +LR +M S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:  243 LMEDVGYSCTSSPEALRTLLAEAGLAKAPTIPAAQVAGMLAMLSRTYTGLDS-GNSATLMANLTIDFEATPL-----HEAAAMPVRDN--------------WDLEVVAEVLQKDYGS-IKWSKVAEQLDRPDLNIQNVSQLRVLITAFQRFSQTKFRVTVLLRPWKNCRAHISILKAAVDAPPEVLSFSESPHKLAPFEGADASAVPKNGVWFSVDIVDTLLQVS-EQDCYGDVRKLLDGAMKTCPDVLIANLAQA-SPRWNALRDDMFSELFSTYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 535          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A662XUI0_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A662XUI0_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.340e-34
Identity = 102/321 (31.78%), Postives = 163/321 (50.78%), Query Frame = 1
Query:  763 FLRDLGHTCCSSPAALRQAIRESGV----IVDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
             + D+G++C +SP A R  + E+G+     +   Q+A +++ML+  Y+     G D E  + L ++L             +D +     +D     +  +  W LEV  +VL +D G  + W  VA+  D    NI +   LRVL+  F+  +     +  L  PW+N R H+S+L+ A+ APP+V +F  SP K AP +  D SAV  NG W SLD+V +LL ++ + + Y  VR +       CP++L+  LA   +    +LR ++ S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:  320 LMEDVGYSCTASPQAFRTLLAEAGLSKAPTIPPAQVAGMLVMLSRTYS-----GLDAENGATLMANLT------------IDFEA-TASEDAAAAAAPLRENWDLEVIAEVLQKDYGS-IKWTKVAEKLDRADLNIQNAVQLRVLITAFQQCSQTKFRTATLLRPWKNSRAHISILKAAVEAPPEVLSFTESPHKLAPFEGADASAVPKNGVWFSLDVVETLLRVS-EQDCYGDVRKLLDGAMKTCPDVLIANLAQA-APRWNALRDDVFSELFSTYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 614          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A3F2RTE5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RTE5_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.080e-33
Identity = 105/321 (32.71%), Postives = 159/321 (49.53%), Query Frame = 1
Query:  763 FLRDLGHTCCSSPAALRQAIRESGVI----VDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
             + D+G++C SSP A R  + E+G+     +   Q+A +++ML+  Y      G D +  + L ++L               +D      D      A +  W LEV   VL +D G  + W  VA+  D    NI +   LRVL+  F+  +        L  PW+N R H+S+L+ A+ APP+V +F+ SP K AP +  D SAV  NG W SLD+V +LL ++ + + Y  VR +       CP++L+  LA   S    +LR +M S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:  246 LMEDVGYSCTSSPQAFRTLLAEAGLAKAPTIPPAQVAGMLVMLSRTYT-----GLDADNGATLMANLT--------------IDFEATPSDEAAAAPAREN-WDLEVIAGVLQKDYGS-IKWAKVAEKLDRVDLNIQNVAQLRVLITAFQRFSQTKFRVTTLLRPWKNSRAHMSILKAAVEAPPEVLSFSESPHKLAPFEGADASAVPKNGVWFSLDVVDTLLQVS-EQDCYGDVRKLLDGAMKMCPDVLIANLAQA-SPRWNALRDDMFSELFSTYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 538          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: A0A0W8DXP3_PHYNI (CCR4-NOT transcription complex subunit 1 n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DXP3_PHYNI)

HSP 1 Score: 145 bits (365), Expect = 1.190e-32
Identity = 103/321 (32.09%), Postives = 158/321 (49.22%), Query Frame = 1
Query:  763 FLRDLGHTCCSSPAALRQAIRESGVI----VDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
             + D+G++C +SP A R  + E+G+     +   Q+A ++ ML+  Y      G D +  + L ++L               +D      D        +  W LEV   VL +D G  + W  VA+  D    NI +   LRVL+  F+  +        L  PW+N R H+S+L+ A+ APP+V +F+ SP K AP +  D SAV  NG W SLD+V +LL ++ + + Y  VR +  +    CP++L+  LA   S    +LR +M S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:  246 LMEDVGYSCTASPQAFRTLLAEAGLAKAPTIPPAQVAGMLAMLSRTYT-----GLDAKNGATLMANLT--------------IDFEASASDEAAAAPVREN-WDLEVIADVLQKDYGS-IKWTKVAEKLDRADLNIQNVAQLRVLITAFQRFSQTKFRVTTLLRPWKNSRAHISILKAAVEAPPEVLSFSESPHKLAPFEGADASAVPKNGVWFSLDIVDTLLQVS-EQDCYGDVRKLLDSAMKTCPDVLIANLAQA-SPRWNALRDDMFSELFSTYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 538          
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Match: W2PN86_PHYPN (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2PN86_PHYPN)

HSP 1 Score: 145 bits (365), Expect = 1.190e-32
Identity = 103/321 (32.09%), Postives = 158/321 (49.22%), Query Frame = 1
Query:  763 FLRDLGHTCCSSPAALRQAIRESGVI----VDERQIAQVIIMLANNYNNTQGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQGLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFRGAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLDEVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELLLLALAAVPSEAGGSLRVEMLSRLLPLYF--RPNRNTHAAALIRRLWQVNPRLVVQSGVKAFNVDSTLPSVV 1707
             + D+G++C +SP A R  + E+G+     +   Q+A ++ ML+  Y      G D +  + L ++L               +D      D        +  W LEV   VL +D G  + W  VA+  D    NI +   LRVL+  F+  +        L  PW+N R H+S+L+ A+ APP+V +F+ SP K AP +  D SAV  NG W SLD+V +LL ++ + + Y  VR +  +    CP++L+  LA   S    +LR +M S L   Y   RPN    A  ++R LW V P+LV+ + VK F   +T P +V
Sbjct:  246 LMEDVGYSCTASPQAFRTLLAEAGLAKAPTIPPAQVAGMLAMLSRTYT-----GLDAKNGATLMANLT--------------IDFEASASDEAAAAPVREN-WDLEVIADVLQKDYGS-IKWTKVAEKLDRADLNIQNVAQLRVLITAFQRFSQTKFRVTTLLRPWKNSRAHISILKAAVEAPPEVLSFSESPHKLAPFEGADASAVPKNGVWFSLDIVDTLLQVS-EQDCYGDVRKLLDSAMKTCPDVLIANLAQA-SPRWNALRDDMFSELFSTYIMGRPN----APLIMRHLWSVAPKLVLYASVKCFYA-ATAPHIV 538          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16401.4047.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMN3_ECTSI1.090e-26073.13CNOT1_TTP_bind domain-containing protein (Fragment... [more]
A0A6H5JXN6_9PHAE3.260e-24169.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHM2_9STRA1.030e-9639.45CCR4-Not complex component, Not1-domain-containing... [more]
W7TUR4_9STRA7.670e-6230.41Ccr4-not transcription n=2 Tax=Monodopsidaceae Tax... [more]
M4BL28_HYAAE1.370e-4929.09Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VNB3_9STRA8.350e-3533.02Uncharacterized protein n=1 Tax=Peronospora effusa... [more]
A0A662XUI0_9STRA4.340e-3431.78Uncharacterized protein (Fragment) n=2 Tax=Peronos... [more]
A0A3F2RTE5_9STRA5.080e-3332.71Uncharacterized protein n=6 Tax=Phytophthora kerno... [more]
A0A0W8DXP3_PHYNI1.190e-3232.09CCR4-NOT transcription complex subunit 1 n=1 Tax=P... [more]
W2PN86_PHYPN1.190e-3232.09Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16401contigH-elongata_contig16401:2361..6943 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score759.6
Seed ortholog evalue1e-216
Seed eggNOG ortholog2880.D8LMN3
KEGG koko:K12604
KEGG Pathwayko03018,map03018
GOsGO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0017148,GO:0018130,GO:0019222,GO:0019438,GO:0019439,GO:0030014,GO:0030015,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032774,GO:0032947,GO:0032991,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035770,GO:0036464,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576,GO:1990904,GO:2000112,GO:2000113
EggNOG free text desc.nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay
EggNOG OGsCOG5103@1,KOG1831@2759
COG Functional cat.DK
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_003880.3
Exons7
Model size1713
Cds size1713
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929959.5590332-CDS-H-elongata_contig16401:2360..25471622929959.5590332-CDS-H-elongata_contig16401:2360..2547Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 2361..2547 +
1691679224.2117438-CDS-H-elongata_contig16401:2360..25471691679224.2117438-CDS-H-elongata_contig16401:2360..2547Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 2361..2547 +
1622929959.57679-CDS-H-elongata_contig16401:3224..34391622929959.57679-CDS-H-elongata_contig16401:3224..3439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 3225..3439 +
1691679224.2236629-CDS-H-elongata_contig16401:3224..34391691679224.2236629-CDS-H-elongata_contig16401:3224..3439Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 3225..3439 +
1622929959.5921478-CDS-H-elongata_contig16401:3871..42941622929959.5921478-CDS-H-elongata_contig16401:3871..4294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 3872..4294 +
1691679224.235767-CDS-H-elongata_contig16401:3871..42941691679224.235767-CDS-H-elongata_contig16401:3871..4294Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 3872..4294 +
1622929959.606825-CDS-H-elongata_contig16401:4555..47461622929959.606825-CDS-H-elongata_contig16401:4555..4746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 4556..4746 +
1691679224.2454243-CDS-H-elongata_contig16401:4555..47461691679224.2454243-CDS-H-elongata_contig16401:4555..4746Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 4556..4746 +
1622929959.6244397-CDS-H-elongata_contig16401:5666..58171622929959.6244397-CDS-H-elongata_contig16401:5666..5817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 5667..5817 +
1691679224.2536545-CDS-H-elongata_contig16401:5666..58171691679224.2536545-CDS-H-elongata_contig16401:5666..5817Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 5667..5817 +
1622929959.6369288-CDS-H-elongata_contig16401:6194..64791622929959.6369288-CDS-H-elongata_contig16401:6194..6479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 6195..6479 +
1691679224.2676861-CDS-H-elongata_contig16401:6194..64791691679224.2676861-CDS-H-elongata_contig16401:6194..6479Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 6195..6479 +
1622929959.650919-CDS-H-elongata_contig16401:6682..69431622929959.650919-CDS-H-elongata_contig16401:6682..6943Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 6683..6943 +
1691679224.2753134-CDS-H-elongata_contig16401:6682..69431691679224.2753134-CDS-H-elongata_contig16401:6682..6943Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16401 6683..6943 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16401.4047.1prot_H-elongata_contig16401.4047.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16401 2361..6943 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16401.4047.1

>prot_H-elongata_contig16401.4047.1 ID=prot_H-elongata_contig16401.4047.1|Name=mRNA_H-elongata_contig16401.4047.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=571bp
QIQLLQHEVAQAAEEPNFASAICRALEGFGGDRVDQPHSRHSGRGGTQGQ
QGPHRITEEFLLGFSRALKLTPPQQVAVGLGLSRSPNPGVSKEGVKFLVA
RVPGLVTGEGGQLSLEALHSLLELVKTSEEVSAQPHVAKSLLEQIREVHK
EGLLAGLLKGGGKEGTEVGGKAARGGGGEEAASASAGSGGTAVSSASWYE
ADALGLVPFFAEQASSTGSGGEMNFLNKTSGAMSLAADVAGIASSIGQGG
NLAGFLRDLGHTCCSSPAALRQAIRESGVIVDERQIAQVIIMLANNYNNT
QGQGDDRELSSALTSSLFSTGAGQARKHRELDLDVGDRCKDVGGGNSAGQ
GLWKLEVARQVLTEDCGHRLDWMLVAKAFDHDSFNIPDQNALRVLLALFR
GAADRDMPSEALYMPWQNRRGHLSLLRTAILAPPQVFTFASSPAKQAPLD
EVDPSAVTPNGAWLSLDLVASLLTLANDTELYAQVRDVFSTPAYQCPELL
LLALAAVPSEAGGSLRVEMLSRLLPLYFRPNRNTHAAALIRRLWQVNPRL
VVQSGVKAFNVDSTLPSVVYV
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mRNA from alignment at H-elongata_contig16401:2361..6943+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16401.4047.1 ID=mRNA_H-elongata_contig16401.4047.1|Name=mRNA_H-elongata_contig16401.4047.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4583bp|location=Sequence derived from alignment at H-elongata_contig16401:2361..6943+ (Himanthalia elongata Himel1 dioecious)
CAGATTCAGCTTCTGCAGCACGAGGTAGCTCAAGCAGCAGAGGAACCGAA CTTCGCTAGCGCAATCTGCAGGGCTCTAGAGGGTTTCGGGGGAGATAGGG TAGACCAGCCGCACAGCAGGCACTCAGGAAGAGGCGGTACTCAGGGACAG CAAGGACCCCACCGCATTACAGAAGAGTTCCTCTTAGGTAGGCAAAGAAA GGGGATTAAGGAGGATGGTAGCGAAACAAAGCGCGCGCACCAAACGGAAG ATAGAAAAGAGTATTTCGAAAGTGTAGATTTTCGGCTTGCGTTTGAAGAA CGTTTTATTCGCTAAAAGACGTCGCGCTGGGAAAGTGGAGGAGTAAGAAA AAGGGTTGGCGTCCCTATATTATGAAGAATCACATATGATGATTTTGTGC TTAGCTGTAGTTAAAATGTCCACATTCGAACTTGACGATAGTTGGTCCCC TGGACTTACAGCTCTCATGGTGCTAAGAAGGCGTGGATGTTCGAATAGTT CGAATGAGTTTATATGTTTTAAAATAAAGGGTTTCGATCGATCGATTCTT GCTAGGTTGAAGTGTAATTTATTTCTGGTTCGTGTGAGCCTGTTTTCTCT CAAGGGAAGGACGTTTGGTGAGTGAGATGTTCGTCTTGACGCGCGCTGGC TATTGTCATATACTCAAAGGGATTTCCGATAACCGTGCAGTATTGAGTCC TCACGGAGGCCCCCGTGTGCGCAAAACCGGCGGCTTTCGACACAGGGGCC ACTCGACTCATCGATAGTTCCAAAATACACGTCCACGCATTTCCGAGCGA GGGTTCTTCTCCAGCGATAATTCCCTCTGTTCTGTGTTTTTTCTCTCGGC TCTCGGATATCCAGGGTTTAGTCGCGCGCTCAAGCTAACGCCGCCGCAGC AAGTTGCGGTAGGCCTCGGACTGTCGCGCTCCCCAAACCCGGGAGTCTCG AAGGAAGGGGTAAAGTTTCTAGTAGCTAGGGTACCGGGGCTTGTCACTGG GGAAGGAGGCCAACTTAGCCTTGAGGCTCTGCACTCGCTGCTGGAGCTGG TAAAAACAAGCGAAGAAGTCTCTGCGCAGGTGGGATTTTCTTGCCCATGG CTTGTCGCGTGAGGGATCTGGGTAGCAACCAAAGCTGCGCTCGCGTCGTG TGTCTTGCGATGATCGATCGTGTTCAACCCCACGGAAGATATGACTTGTT ATTCCATGTATGCGAAGCAGTAAAGGCAATGGCCTTGCCTCGGGCACGTC TCCTGCGTTTCAATGGTTCTGTTTTTGAACTGGATAGACTTCCCTCTTGT TATTTGTACCACCCTTTGATTTAAATTTAATGTAGCAATCAGGGTAAAGA AATCAGCATTTTGCTTGTGTTTTGTTAAAAAAAGAAATGTATATATTTAT TTATATGCTTTTTGACTTAGATGCCATGACGATGATGCCTTACAGTGTCG GGACCTCCTCTCCTTCTGCCCCATGTACTCTCATTTCGCGTGTCGCGGCC GTGCTCATCAGCCGCACGTGGCCAAGAGTCTGCTAGAGCAGATCAGGGAG GTTCACAAGGAAGGCCTCTTGGCAGGGTTGTTAAAAGGTGGTGGTAAAGA GGGGACTGAAGTGGGGGGAAAAGCCGCAAGAGGAGGAGGAGGCGAGGAAG CCGCATCCGCCTCAGCGGGATCAGGGGGAACCGCGGTATCGTCGGCGTCG TGGTACGAGGCAGACGCGCTTGGACTGGTGCCGTTCTTTGCGGAGCAAGC GTCGTCAACCGGCAGCGGGGGAGAAATGAACTTTTTGAATAAGACGAGTG GGGCGATGTCGCTTGCGGCTGACGTGGCCGGTATCGCGAGCAGCATAGGG CAGGGGGGAAACCTCGCAGGATTCTTGAGGGACCTCGGCCACACTTGCTG CTCAAGTCCCGCTGCCCTGCGACAGGCAATTAGGGTAAGTCGGTCTAAGC AGGGACATAAAGGGACCTTCAAGATAGTCGTCCGCTGACTGGTGTGGATA GTTCGTGGAGGCGTAGGCCAACCGGCATCAGATTTTTTGGTAATTTTTGT GTCTCCCCCCGTCCCCTATCGTGGAGCTTGTCTCCGTCGTTTACGGTATA GTTTGAGTGTTAGCGGGGGGGTTTTCTCGTTTTCTTTCTTTGGAACGAGC TATCAAAGTCAGCCTCTGTCTGTGTCTCTGCTTCCTCCCTCACAGGAAAG TGGAGTGATCGTTGACGAGCGACAGATCGCGCAAGTGATCATCATGCTGG CCAACAACTACAACAACACCCAGGGGCAGGGAGACGATAGAGAGCTTTCG TCTGCTCTCACGAGCAGCCTTTTCTCCACGGGAGCAGGACAGGCGAGAAA ACATAGAGAGCTGGATCTCGATGTTGGTGATCGTTGGTGATCGTCTGACA CCTTTGACAAGATTTACGGTTTTTTGTTTCCCTGAAAAATGTTGCTATTG TCAACCACCTCCTAGTTTAGATTAATTTACTTCGATTAATAGAGAAGAAT AATCTACCGGTACAATTTTGGTAAAACAGTTAAAAAGTTTATTTCGATAT TTTGTGTATTAATAGTGTACTGTCTTATTGTACTTCAATATTAAACCCTA AATCTAAGTAATAATAAGAGTAGAAGAGTACCGTAGTCAGCCTCCGATAC TGTCTTTGGCTGTATCGCACATGTCCACTCTTCCCATAGTGGGTGTAGGA AAAGAGAGGCGTACAATAATTGGTCCTTGGGGTTTACCTGAGTAGGCTGC ATCAGTTACGCAAGCTACCTAGAGAACTGTTGGCTCAGTGCCATCAGACT CTCGGCTGTAAACGCCATTGGTAAACAATTAGCCCGATGGCGCTTGATGG TAAAGATAAACGCCGTCGCGGAAAACGAGAGGATACCAGGAACACGCACC AGATTCGGCCTGGGTTAAGCGAATGAGCAGGCTGACGTGGGACGGGTGCC GAACCCGTGTCGCGAGACCAAATAATGGGGCGCGAGCGGGGGTAGGGATT TTTGTTTTTCCCCGCCCAGCTAACCACAAGTAGAAGGCAAGCATATCCGG TCGATCCTTACTCTGCTATATGGGCTGACCATATTCCCGAGCGTGCCCAT GCCTAATTACCATTATGGCGCATTAGCAGGCAGCACACAAGCCTTTTTAC TACACCCACAAAACATTATTTAAAATAATGTCACTTAGCGCCCTCCCTAC CGCCACCCAAACCTCACGGGTGCGCCAAAAGCAGTGCAGCTTTTATTGCT GTTGCAACCCCCCTTGGGGCCGCCTTTGGTCTTTGTTTTGTTTGTTGCCA GGTGAGCAAAGATGTAGGGGGGGGAAACTCCGCGGGACAAGGCCTGTGGA AGCTGGAAGTTGCGCGGCAGGTGCTCACAGAAGACTGTGGACATCGGCTC GACTGGATGTTGGTCGCGAAGGCGTTCGATCACGACAGTTTTAACATTCC AGATCAGGTGAGAGAAAATATTGGGAAGAGCTCGAGCAGTAAGGTACGCC ACGGTGCAGGGGAATGAGGATCGTTTGCGGTTATTTTGAGGCTCCGTAAC ACGTTGTCATATGAGCATCTGCTTGAGATCACGTCATGTCGGTTGCGTGC TACTGTGGCTGCGTTGGGAAAAAGGCAAAAAACAAGACCGGGGCGTGTAT ACGCCCCGGGGTTAAGCGCTGGAGAGCGCGCCTTTTTCGATCATGTGACG TTTCAAATCCCCACGAGGCGAGTGTATCTCATACCTTTGGGGTATTTTTC TCGCCCTCCCTTGCAAAACGCCGTCGAGACAAGTGTCCTAACCCCCTCGT TCCTCCTCCTACTCCTCCTTTTCACTCGTATTAGAACGCCTTACGGGTGC TTCTCGCGCTCTTTCGCGGAGCGGCGGACCGCGACATGCCATCCGAGGCA CTGTACATGCCCTGGCAGAACAGGCGTGGGCACCTGAGCCTCTTGCGGAC TGCCATTTTGGCGCCGCCACAGGTCTTCACTTTCGCCTCGTCTCCCGCCA AGCAGGCACCCCTCGATGAAGTGGACCCGAGTGCGGTGACTCCGAACGGG GCTTGGCTGAGCCTCGACCTAGTAGCGTCACTGTTGACTCTCGCCAACGA CACGGAGCTGTACGCGCAGGTATGGTCGCTGTTGGGCACACTTGTTGGTT GACTATAACGTTTTCACGAAGTCCTCACCTTAACTACCCTACCCTTCTCC CCCTCCCCCCAAAGGAAATGAAATGTTTTTTAAATGTTTGGCTGTTCGGG CTTCTGTCCCATCGCCCGCGCTCATGGTGTGTATTTGTTTGGATCTACGT GTGTGTGGGGGGGGGTTAACAGGTGCGCGACGTCTTCAGCACGCCGGCGT ATCAGTGCCCGGAGCTCCTCCTTTTAGCCCTTGCCGCAGTGCCGAGCGAG GCAGGAGGGAGCCTTCGGGTAGAGATGCTCTCGAGGCTGTTGCCTCTCTA TTTCCGGCCGAACCGCAACACCCACGCGGCAGCGCTGATCCGCAGGCTGT GGCAGGTAAACCCGAGGCTCGTTGTGCAGAGTGGGGTGAAGGCGTTCAAC GTGGACAGTACACTGCCAAGCGTCGTCTATGTG
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Coding sequence (CDS) from alignment at H-elongata_contig16401:2361..6943+

>mRNA_H-elongata_contig16401.4047.1 ID=mRNA_H-elongata_contig16401.4047.1|Name=mRNA_H-elongata_contig16401.4047.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3426bp|location=Sequence derived from alignment at H-elongata_contig16401:2361..6943+ (Himanthalia elongata Himel1 dioecious)
CAGATTCAGCTTCTGCAGCACGAGGTAGCTCAAGCAGCAGAGGAACCGAA
CTTCGCTAGCGCAATCTGCAGGGCTCTAGAGGGTTTCGGGGGAGATAGGG
TAGACCAGCCGCACAGCAGGCACTCAGGAAGAGGCGGTACTCAGGGACAG
CAAGGACCCCACCGCATTACAGAAGAGTTCCTCTTAGCAGATTCAGCTTC
TGCAGCACGAGGTAGCTCAAGCAGCAGAGGAACCGAACTTCGCTAGCGCA
ATCTGCAGGGCTCTAGAGGGTTTCGGGGGAGATAGGGTAGACCAGCCGCA
CAGCAGGCACTCAGGAAGAGGCGGTACTCAGGGACAGCAAGGACCCCACC
GCATTACAGAAGAGTTCCTCTTAGGGTTTAGTCGCGCGCTCAAGCTAACG
CCGCCGCAGCAAGTTGCGGTAGGCCTCGGACTGTCGCGCTCCCCAAACCC
GGGAGTCTCGAAGGAAGGGGTAAAGTTTCTAGTAGCTAGGGTACCGGGGC
TTGTCACTGGGGAAGGAGGCCAACTTAGCCTTGAGGCTCTGCACTCGCTG
CTGGAGCTGGTAAAAACAAGCGAAGAAGTCTCTGCGCAGGGTTTAGTCGC
GCGCTCAAGCTAACGCCGCCGCAGCAAGTTGCGGTAGGCCTCGGACTGTC
GCGCTCCCCAAACCCGGGAGTCTCGAAGGAAGGGGTAAAGTTTCTAGTAG
CTAGGGTACCGGGGCTTGTCACTGGGGAAGGAGGCCAACTTAGCCTTGAG
GCTCTGCACTCGCTGCTGGAGCTGGTAAAAACAAGCGAAGAAGTCTCTGC
GCAGCCGCACGTGGCCAAGAGTCTGCTAGAGCAGATCAGGGAGGTTCACA
AGGAAGGCCTCTTGGCAGGGTTGTTAAAAGGTGGTGGTAAAGAGGGGACT
GAAGTGGGGGGAAAAGCCGCAAGAGGAGGAGGAGGCGAGGAAGCCGCATC
CGCCTCAGCGGGATCAGGGGGAACCGCGGTATCGTCGGCGTCGTGGTACG
AGGCAGACGCGCTTGGACTGGTGCCGTTCTTTGCGGAGCAAGCGTCGTCA
ACCGGCAGCGGGGGAGAAATGAACTTTTTGAATAAGACGAGTGGGGCGAT
GTCGCTTGCGGCTGACGTGGCCGGTATCGCGAGCAGCATAGGGCAGGGGG
GAAACCTCGCAGGATTCTTGAGGGACCTCGGCCACACTTGCTGCTCAAGT
CCCGCTGCCCTGCGACAGGCAATTAGGCCGCACGTGGCCAAGAGTCTGCT
AGAGCAGATCAGGGAGGTTCACAAGGAAGGCCTCTTGGCAGGGTTGTTAA
AAGGTGGTGGTAAAGAGGGGACTGAAGTGGGGGGAAAAGCCGCAAGAGGA
GGAGGAGGCGAGGAAGCCGCATCCGCCTCAGCGGGATCAGGGGGAACCGC
GGTATCGTCGGCGTCGTGGTACGAGGCAGACGCGCTTGGACTGGTGCCGT
TCTTTGCGGAGCAAGCGTCGTCAACCGGCAGCGGGGGAGAAATGAACTTT
TTGAATAAGACGAGTGGGGCGATGTCGCTTGCGGCTGACGTGGCCGGTAT
CGCGAGCAGCATAGGGCAGGGGGGAAACCTCGCAGGATTCTTGAGGGACC
TCGGCCACACTTGCTGCTCAAGTCCCGCTGCCCTGCGACAGGCAATTAGG
GAAAGTGGAGTGATCGTTGACGAGCGACAGATCGCGCAAGTGATCATCAT
GCTGGCCAACAACTACAACAACACCCAGGGGCAGGGAGACGATAGAGAGC
TTTCGTCTGCTCTCACGAGCAGCCTTTTCTCCACGGGAGCAGGACAGGCG
AGAAAACATAGAGAGCTGGATCTCGATGTTGGTGATCGTTGGAAAGTGGA
GTGATCGTTGACGAGCGACAGATCGCGCAAGTGATCATCATGCTGGCCAA
CAACTACAACAACACCCAGGGGCAGGGAGACGATAGAGAGCTTTCGTCTG
CTCTCACGAGCAGCCTTTTCTCCACGGGAGCAGGACAGGCGAGAAAACAT
AGAGAGCTGGATCTCGATGTTGGTGATCGTTGCAAAGATGTAGGGGGGGG
AAACTCCGCGGGACAAGGCCTGTGGAAGCTGGAAGTTGCGCGGCAGGTGC
TCACAGAAGACTGTGGACATCGGCTCGACTGGATGTTGGTCGCGAAGGCG
TTCGATCACGACAGTTTTAACATTCCAGATCAGCAAAGATGTAGGGGGGG
GAAACTCCGCGGGACAAGGCCTGTGGAAGCTGGAAGTTGCGCGGCAGGTG
CTCACAGAAGACTGTGGACATCGGCTCGACTGGATGTTGGTCGCGAAGGC
GTTCGATCACGACAGTTTTAACATTCCAGATCAGAACGCCTTACGGGTGC
TTCTCGCGCTCTTTCGCGGAGCGGCGGACCGCGACATGCCATCCGAGGCA
CTGTACATGCCCTGGCAGAACAGGCGTGGGCACCTGAGCCTCTTGCGGAC
TGCCATTTTGGCGCCGCCACAGGTCTTCACTTTCGCCTCGTCTCCCGCCA
AGCAGGCACCCCTCGATGAAGTGGACCCGAGTGCGGTGACTCCGAACGGG
GCTTGGCTGAGCCTCGACCTAGTAGCGTCACTGTTGACTCTCGCCAACGA
CACGGAGCTGTACGCGCAGAACGCCTTACGGGTGCTTCTCGCGCTCTTTC
GCGGAGCGGCGGACCGCGACATGCCATCCGAGGCACTGTACATGCCCTGG
CAGAACAGGCGTGGGCACCTGAGCCTCTTGCGGACTGCCATTTTGGCGCC
GCCACAGGTCTTCACTTTCGCCTCGTCTCCCGCCAAGCAGGCACCCCTCG
ATGAAGTGGACCCGAGTGCGGTGACTCCGAACGGGGCTTGGCTGAGCCTC
GACCTAGTAGCGTCACTGTTGACTCTCGCCAACGACACGGAGCTGTACGC
GCAGGTGCGCGACGTCTTCAGCACGCCGGCGTATCAGTGCCCGGAGCTCC
TCCTTTTAGCCCTTGCCGCAGTGCCGAGCGAGGCAGGAGGGAGCCTTCGG
GTAGAGATGCTCTCGAGGCTGTTGCCTCTCTATTTCCGGCCGAACCGCAA
CACCCACGCGGCAGCGCTGATCCGCAGGCTGTGGCAGGTAAACCCGAGGC
TCGTTGTGCAGAGTGGGGTGAAGGCGTTCAACGTGGACAGTACACTGCCA
AGCGTCGTCTATGTGGTGCGCGACGTCTTCAGCACGCCGGCGTATCAGTG
CCCGGAGCTCCTCCTTTTAGCCCTTGCCGCAGTGCCGAGCGAGGCAGGAG
GGAGCCTTCGGGTAGAGATGCTCTCGAGGCTGTTGCCTCTCTATTTCCGG
CCGAACCGCAACACCCACGCGGCAGCGCTGATCCGCAGGCTGTGGCAGGT
AAACCCGAGGCTCGTTGTGCAGAGTGGGGTGAAGGCGTTCAACGTGGACA
GTACACTGCCAAGCGTCGTCTATGTG
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