prot_H-elongata_contig16399.4043.1 (polypeptide) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JRC6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC6_9PHAE) HSP 1 Score: 130 bits (326), Expect = 1.170e-31 Identity = 59/163 (36.20%), Postives = 99/163 (60.74%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDK 184
+G+K + K ++GK+EK+K +LVA+G WQ+ V Y + P P++ SI+++L + K L H+D KQA+ +DE++++++P + +AI+GL +GR W D + G EQ K DPC+FRK+VD V +++V++VDDIL +D+
Sbjct: 416 VGSKWCFSWKTNKEGKIEKFKARLVARGLWQIPNVDYFHSFSPCPLSVSIKLMLAVASKKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKHSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE 578
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JIS9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIS9_9PHAE) HSP 1 Score: 122 bits (306), Expect = 2.870e-31 Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 0
Query: 31 KVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
K ++GKV+K+K LVA+GF Q+ V + P P +ASI+++L K L H+D KQA+ +DE++++ IP Y + +AI+GL Q+GR W D + G EQ K DPC+FRK+VD V +V+V++VDDIL +D+ + A+
Sbjct: 10 KTNKEGKVDKFKALLVARGFSQIPNVDFFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLRIPAGYGDKSHKIVQAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMVIVIYVDDILVAGSDEDCEELLAS 171
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JUN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN0_9PHAE) HSP 1 Score: 122 bits (307), Expect = 1.120e-29 Identity = 61/171 (35.67%), Postives = 100/171 (58.48%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
IG+K ++ K + G + +K ++VA+GF Q+ G+ + P AS++ ++ K +L H+D KQA++ + E++Y+ PE G V + +A++GL Q+GR W + D + G EQ + DPC+FRKVVDGEV ++V++VDDIL A + D FA+
Sbjct: 61 IGSKWVFSWKTNEKGLILDFKARVVARGFSQIPGIDFHRSSSACPSAASLKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIEYGYEQCRVDPCIFRKVVDGEVVGLIVINVDDILVAADEGEREDLFAS 231
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5KY81_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY81_9PHAE) HSP 1 Score: 122 bits (305), Expect = 2.480e-29 Identity = 60/171 (35.09%), Postives = 101/171 (59.06%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
IG++ ++ K + G + +K ++VA+GF Q+ G+ + P ASI+ ++ K +L H+D KQA++ ++E++Y+ PE + G V + +A++GL Q+GR W + D + G EQ + DPC+FRKVVDGEV ++V++VDDIL A + FA+
Sbjct: 147 IGSEWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPPAASIKTMIAVATEKGKKLDHWDVKQAYIHATLNEEIYLRFPEGHGSMSGKVVKVERALYGLKQSGREWGVEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREGLFAS 317
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A392PD17_9FABA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Trifolium TaxID=3898 RepID=A0A392PD17_9FABA) HSP 1 Score: 117 bits (294), Expect = 5.160e-29 Identity = 66/179 (36.87%), Postives = 101/179 (56.42%), Query Frame = 0
Query: 17 KDKLVIGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKF-PGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAAEL 194
K K +G K +Y K DG +E+YK +LV G QVEG+ Y E + P +++++L AAK E+ D AFL + E++Y++ P ++ F PG V L K+++GL QA RCW K+ + G Q+ D +F +V EV++VV+V+VDD++ D A + RF A L
Sbjct: 11 KGKKPLGCKWVYKIKHNSDGTIERYKARLVIFGNHQVEGIDYNETFAPVAKMVTVRLVLAVAAAKKWEIHQMDVHNAFLHGDLHEEVYMKPPPGFRTFQPGLVCKLKKSLYGLKQAPRCWFAKLSSALKKFGFRQSCSDYSLFTLLVH-EVQIVVLVYVDDLIVCGNDSAAIQRFKAYL 188
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY) HSP 1 Score: 121 bits (303), Expect = 7.980e-29 Identity = 69/194 (35.57%), Postives = 113/194 (58.25%), Query Frame = 0
Query: 1 MRGMVENCVYKQVARQKDKLVIGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAAEL 194
M V+ ++ +V K++ V+G+K ++ K G +GK+EKYK +LVAQGF QV+G+ YTE + P SI+ LL A D E+ D K AFL +DE++Y++ P + G V L K+++ L QA W KV ++ A+G +++ D +F K +G + ++V V+V+D+L + +D+ AEL
Sbjct: 17 MLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYMKCPPGHHAKEGIVWKLKKSLYELKQASCEWYKKVREEFEALGFTRSEADHSVFYKNENGAL-MIVAVYVNDMLLFSNSMKGIDQLKAEL 209
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5K3C5_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3C5_9PHAE) HSP 1 Score: 122 bits (306), Expect = 8.640e-29 Identity = 61/171 (35.67%), Postives = 100/171 (58.48%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
IG+K ++ K + G + +K ++VA+GF Q+ G+ + P ASI+ ++ K +L H+D KQA++ + E++Y+ PE G V + +A++GL Q+GR W + D + G EQ + DPC+FRKVVDGEV ++V++VDDIL A + + FA+
Sbjct: 503 IGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHRSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQSGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFAS 673
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JK49_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK49_9PHAE) HSP 1 Score: 122 bits (305), Expect = 9.420e-29 Identity = 61/171 (35.67%), Postives = 101/171 (59.06%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
IG+K ++ K G + +K ++VA+GF Q+ G+ + P ASI+ ++ K +L H+D KQA++ + E++Y+ +PE G V + +A++GL Q+GR W +V D + G EQ + DPC+FRKVVDGEV ++V++VD+IL A + + FA+
Sbjct: 328 IGSKWVFSSKTNGKGLIVDFKARMVARGFSQIPGIDFHHSSSAFPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRLPEGCGSMSGKVVKVERALYGLKQSGREWGFEVADALIENGCEQCRVDPCVFRKVVDGEVVGLIVIYVDEILVAADEGEREELFAS 498
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JMA7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA7_9PHAE) HSP 1 Score: 118 bits (295), Expect = 9.440e-29 Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = 0
Query: 20 LVIGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAAEL 194
L IG+K ++ K ++ + +K ++VA+GF Q+ + + P ASI+ ++ + K +L H+D KQA++ + E LY+ PE G V + +A++GL Q+G W + D + G EQ + DPC+FRKVVDGEV ++V++VDDIL A D+ + F A L
Sbjct: 22 LAIGSKWVFSWKTNENDLMVDFKARMVARGFSQIPSIDFHHSSSACPSAASIKTVITVASEKGKKLAHWDVKQAYIHAKLKEGLYLRFPEGCGSMSGKVVKVERALYGLKQSGHEWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILV-AADEGEREEFFASL 195
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Match: A0A6H5JI74_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI74_9PHAE) HSP 1 Score: 122 bits (305), Expect = 1.340e-28 Identity = 61/171 (35.67%), Postives = 99/171 (57.89%), Query Frame = 0
Query: 22 IGTKMLYMRKVGQDGKVEKYKCQLVAQGFWQVEGVHYTEKYLPTPVTASIQMLLVTTAAKDGELRHFDAKQAFLKVGIDEKLYIEIPEEYQKFPGAVGWLNKAIHGLIQAGRCWNNKVYDDMAAIGLEQAKEDPCMFRKVVDGEVEVVVVVHVDDILAHATDKATMDRFAA 192
IG+K ++ K + G + +K ++VA+GF Q+ G+ + P ASI+ ++ K +L H+D KQA++ + E++Y+ PE G V + +A++GL Q GR W + D + G EQ + DPC+FRKVVDGEV ++V++VDDIL A + + FA+
Sbjct: 545 IGSKWVFSWKTNEKGLIVDFKARMVARGFSQIPGIDFHHSSSACPSAASIKTVIAVATEKGKKLAHWDVKQAYIHAKLKEEIYLRFPEGCGSMSGKVVKVERALYGLKQGGREWGFEAADALIENGYEQCRVDPCVFRKVVDGEVVGLIVIYVDDILVAADEGEREELFAS 715 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16399.4043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-elongata_contig16399.4043.1 ID=prot_H-elongata_contig16399.4043.1|Name=mRNA_H-elongata_contig16399.4043.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=196bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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