prot_H-elongata_contig16393.4041.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16393.4041.1
Unique Nameprot_H-elongata_contig16393.4041.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length180
Homology
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: D7FXE6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE6_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 3.010e-44
Identity = 93/191 (48.69%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    4 RPSEDGR-RLRWDIDIDLEVPTIVEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSK------------YDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSCSSIRLEVLQFEEVPGLLATLPKI-PQKGPKV 180
            R S  GR RL+W +D+D+ VP  +E L+ GPWDP  D+W RQ+DMA QVI  S GVVF+EQLAPILNPR GP +            Y++G +  +    V  E +V+ R+L +LNG PEVT+DGDILYVF G  R K G     + D  +     G ++      EVLQFEEVP LL  LPKI P +GPKV
Sbjct:  148 RSSAPGRLRLKWGVDLDIPVPVALEALVKGPWDPQGDMWKRQLDMAAQVISRSGGVVFMEQLAPILNPREGPPEWYRVCADAGGGFYEKGDKSDISVDAVGGEALVL-RVLLDLNGSPEVTSDGDILYVFPGFARGKRGREGSIEADYHSEESETGSTAAP----EVLQFEEVPRLLEALPKIIPDQGPKV 333          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A6H5JLK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK5_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 1.460e-43
Identity = 92/191 (48.17%), Postives = 118/191 (61.78%), Query Frame = 0
Query:    4 RPSEDGR-RLRWDIDIDLEVPTIVEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSK------------YDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSCSSIRLEVLQFEEVPGLLATLPK-IPQKGPKV 180
            + S  GR RL+W +D+D+ VP  +E L+ GPWDP  D+W RQ+DMA QVI  S GVVF+EQLAPILNPR GP +            Y++G +  +    V  E +V+ R+L +LNG PEVT+DGDILYVF G  R K G     + D  +     G ++      EVLQFEEVP LL +LPK IP +GPKV
Sbjct:  185 KSSAPGRLRLKWGVDLDIPVPVALEALVKGPWDPQGDMWERQLDMAAQVISRSGGVVFMEQLAPILNPREGPREWYRVCADAGGDFYEKGDKSGISVDAVGGEALVL-RVLLDLNGSPEVTSDGDILYVFPGFARGKRGREGNIEADYRSEESETGSTAAP----EVLQFEEVPRLLESLPKMIPDQGPKV 370          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A6H5K1U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1U7_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 7.750e-38
Identity = 84/186 (45.16%), Postives = 106/186 (56.99%), Query Frame = 0
Query:   20 LEVPTIVEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDR--------------GRERSLEGSTV--IDETIVVGRLLSELNGVPEVTNDGDILYVFSGL--------GRAKAGVSKRDDFDVLTGAFSAGGSSCSSIRL--EVLQFEEVPGLLATLPKIPQKGPK 179
            + VP  +E+L+ GPWDP  D W RQ+DMA QV+  S GVVF+EQLAP+LNPR GP ++ R              G+  + +G ++  +    +V RLL ELNG PEVT+DGDILYVF G         GRA AG  +    +        GG          EVLQFEEVPGLL  LPK+P +GPK
Sbjct:    8 IHVPLALEELVRGPWDPQRDTWRRQLDMAAQVVQRSGGVVFMEQLAPVLNPREGPPEWYRESATGGGGRGAAGYGKNGATDGISIEAVGGEALVLRLLFELNGAPEVTDDGDILYVFPGFAAKGEACEGRAAAG--EAPTLEAFEAEQRGGGGEEKEFTATPEVLQFEEVPGLLDVLPKMPDQGPK 191          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A7S0TJI6_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TJI6_HEMAN)

HSP 1 Score: 63.9 bits (154), Expect = 2.740e-9
Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 0
Query:   26 VEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSCSSIR 154
            V   L+G  DPN D+  R+     QV+ ++ G V  EQ+AP ++P    S  DRG         + DE  ++  + + L G PEVT DGDI+YVF  L  +  G           GA + GG     I+
Sbjct:   53 VFSFLFGDGDPNSDLEDRRYRAIAQVVRDNGGAVTAEQIAPYMDPDRAYSNADRG--------AMPDEAFILPAIQA-LKGTPEVTEDGDIVYVFDELQESAGG-----------GAAALGGMGAREIK 161          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: D8LHB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHB2_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 5.990e-9
Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   30 LWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGL 123
            ++G  DPN D+  R+V+ A  +I  + G V  EQLAP+L P    S            S+V+DE+ V+  +L+ L+G PEVT DGDI+YVF  L
Sbjct:  211 IFGDGDPNADMDQRRVEAAATLIRGNGGAVSAEQLAPLLTPEALRSS----------DSSVVDESFVLP-ILTALDGAPEVTADGDIVYVFPSL 293          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A7S0V774_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0V774_9CRYP)

HSP 1 Score: 63.9 bits (154), Expect = 8.660e-9
Identity = 44/129 (34.11%), Postives = 61/129 (47.29%), Query Frame = 0
Query:   26 VEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSCSSIR 154
            V   L+G  DPN D+  R+     QV+ ++ G V  EQ+AP +NP          R  S  G  + DE  ++  + + L G PEVT DGDI+YVF  L  +  G           GA + GG S   I+
Sbjct:   43 VFSFLFGDGDPNSDLEDRRYRAIAQVVRDNGGAVTAEQIAPYMNP---------DRAYSGSGGAMPDEGFILPAIQA-LKGTPEVTEDGDIVYVFDELQESAGG-----------GAAALGGMSAREIK 150          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A7S1DQY1_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DQY1_HEMAN)

HSP 1 Score: 63.9 bits (154), Expect = 1.110e-8
Identity = 43/129 (33.33%), Postives = 61/129 (47.29%), Query Frame = 0
Query:   26 VEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSCSSIR 154
            V   L+G  DPN D+  R+     QV+ ++ G V  EQ+AP ++P    S  DRG         + DE  ++  + + L G PEVT DGDI+YVF  L  +  G           GA + GG     I+
Sbjct:  266 VFSFLFGDGDPNSDLEDRRYRAIAQVVRDNGGAVTAEQIAPYMDPDRAYSNADRG--------AMPDEAFILPAIQA-LKGTPEVTEDGDIVYVFDELQESAGG-----------GAAALGGMGAREIK 374          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A7S1I387_9EUGL (Hypothetical protein n=2 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1I387_9EUGL)

HSP 1 Score: 60.5 bits (145), Expect = 1.740e-7
Identity = 42/107 (39.25%), Postives = 60/107 (56.07%), Query Frame = 0
Query:   26 VEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVFSGLGRAKAGVSK 132
            V   ++G  +PN  +  R+  M  QVI +++G V  EQLAP L P    S + R  +     S V+DE  V G +L+  NG  EVT+ GDI+YVF  L R+ +G S+
Sbjct:  304 VYSFVFGDGNPNYRLDERRYQMIAQVIRDNDGAVVAEQLAPYLEPP--ESWFQRSPD-----SVVVDEAFV-GPVLTRFNGHAEVTDQGDIVYVFDDL-RSTSGKSR 401          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A2V3IJC2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC2_9FLOR)

HSP 1 Score: 58.9 bits (141), Expect = 5.700e-7
Identity = 36/95 (37.89%), Postives = 47/95 (49.47%), Query Frame = 0
Query:   26 VEKLLWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVF 120
            V   ++G  DPNE   TRQ      +I  + G V  EQLAP L+P             +     V+DE+ V+  +L   NG PEVT  GDI+YVF
Sbjct:  249 VYSFVFGDGDPNEQFETRQYRTIAAIIRSNKGAVTAEQLAPYLDP-------------TFRDGNVVDESYVLP-VLQRFNGHPEVTQQGDIIYVF 329          
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Match: A0A7S2PD57_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PD57_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 7.490e-7
Identity = 32/91 (35.16%), Postives = 55/91 (60.44%), Query Frame = 0
Query:   30 LWGPWDPNEDIWTRQVDMAEQVIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRLLSELNGVPEVTNDGDILYVF 120
            ++G  DPN D+  R++ +  ++I ++ G V  EQLAP  +    P   D G E        +DE+ V+  ++++L+G P+VT++GDI+YVF
Sbjct:  123 VFGDGDPNGDVEERRLALVGEMIRQNGGAVTAEQLAPFCDD--APMPLDNGEEER----AYVDESFVLP-IVTQLDGEPQVTDEGDIVYVF 206          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16393.4041.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXE6_ECTSI3.010e-4448.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JLK5_9PHAE1.460e-4348.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1U7_9PHAE7.750e-3845.16Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0TJI6_HEMAN2.740e-933.33Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
D8LHB2_ECTSI5.990e-941.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0V774_9CRYP8.660e-934.11Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S1DQY1_HEMAN1.110e-833.33Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S1I387_9EUGL1.740e-739.25Hypothetical protein n=2 Tax=Eutreptiella gymnasti... [more]
A0A2V3IJC2_9FLOR5.700e-737.89Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2PD57_9STRA7.490e-735.16Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16393contigH-elongata_contig16393:83..1675 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16393.4041.1mRNA_H-elongata_contig16393.4041.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16393 83..1702 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16393.4041.1 ID=prot_H-elongata_contig16393.4041.1|Name=mRNA_H-elongata_contig16393.4041.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=180bp
MKVRPSEDGRRLRWDIDIDLEVPTIVEKLLWGPWDPNEDIWTRQVDMAEQ
VIIESNGVVFLEQLAPILNPRGGPSKYDRGRERSLEGSTVIDETIVVGRL
LSELNGVPEVTNDGDILYVFSGLGRAKAGVSKRDDFDVLTGAFSAGGSSC
SSIRLEVLQFEEVPGLLATLPKIPQKGPKV
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