prot_H-elongata_contig163837.4037.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig163837.4037.1
Unique Name	prot_H-elongata_contig163837.4037.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	103

Homology

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BLAST of mRNA_H-elongata_contig163837.4037.1 vs. uniprot
Match: A0A6H5KCA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA0_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.480e-17
Identity = 52/96 (54.17%), Postives = 69/96 (71.88%), Query Frame = 0

Query:    5 QVLVQGNKALMNARINVAEREDNRTQRELQELSERLASDGRDALANLRRELEHEAELRLESERTRLQEQMAEALRREHDRLAMERDLRIANARSTA 100
            Q   + NKAL+ AR  +AERE  RT+RELQ+LSERL +DGRDALA+ RR+LE E E RL  ER  L+E +A AL++E +RL  ER L++ +AR  +
Sbjct:   57 QESAEENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASFRRDLEAEEEKRLAEERGNLKEALARALQQERERLVTERKLKVFDARDAS 152

[Close]

BLAST of mRNA_H-elongata_contig163837.4037.1 vs. uniprot
Match: D7FK94_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK94_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.830e-13
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0

Query:    1 RDGKQVLVQGNKALMNARINVAEREDNRTQRELQELSERLASDGRDALANLRRELEHEAELRLESERTRLQEQMAEAL 78
            ++  +VL Q NKAL+ AR  +AERE  RT+RELQ+LSERL +DGRDALA+LRRELE E E RL  ER  L+E +A  L
Sbjct:  427 QESAEVLEQENKALLEARARLAEREGARTKRELQDLSERLTNDGRDALASLRRELEVEEEKRLAEERGNLKEALAHDL 504

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig163837.4037.1 vs. uniprot

BLAST of mRNA_H-elongata_contig163837.4037.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KCA0_9PHAE	2.480e-17	54.17	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FK94_ECTSI	1.830e-13	60.26	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 19..39
None	No IPR available	COILS	Coil	Coil	coord: 48..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig163837	contig	H-elongata_contig163837:64..1116 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig163837.4037.1	mRNA_H-elongata_contig163837.4037.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig163837 64..1116 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig163837.4037.1 ID=prot_H-elongata_contig163837.4037.1|Name=mRNA_H-elongata_contig163837.4037.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
RDGKQVLVQGNKALMNARINVAEREDNRTQRELQELSERLASDGRDALAN
LRRELEHEAELRLESERTRLQEQMAEALRREHDRLAMERDLRIANARSTA
RY*