mRNA_H-elongata_contig16373.4031.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 221 bits (564), Expect = 6.480e-62 Identity = 161/426 (37.79%), Postives = 223/426 (52.35%), Query Frame = 1
Query: 439 CEEKQDLDYPLAMAAEQQPKLSTPSHVENHLSGVESPPFSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWL-------EGRKKTTSLSSYLLTKTNKQTT*----ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
C + LA+A E+ KL NH ++ F+ ++ ++++L G E S RAIY LKQS R+WG+ ADTL+E CVF + K + + + ++ SL+ TK + A TLR +++ RFDV STS IPASP VD+GPKR DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH SKTQ +VSL ++E+E+I AGE VKEALF R VLS IAPET+ +SI VL D+Q A AL++NPLSSARSKHIDVR+HFIR LFR+ +IS+++V++++QHAD+ TKALS+++ QYH
Sbjct: 88 CPSSASIKLMLAVANEKSLKL-------NHWDVKQA--FTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKM---KDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYH 500
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5LGF7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LGF7_9PHAE) HSP 1 Score: 222 bits (565), Expect = 5.270e-59 Identity = 162/427 (37.94%), Postives = 225/427 (52.69%), Query Frame = 1
Query: 439 CEEKQDLDYPLAMAAEQQPKLSTPSHVENHLSGVESPPFSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWL-------EGRKKTTSLSSYLLTKTNKQTT*ASAHGT-----MGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
C + LA+A E+ KL NH ++ F+ ++ ++++L G E S RAIY LKQS R+WG+ ADTL+E CVF + K + + + ++ SL+ TK + G TLR + A +++ RFDV STS IPASP VD+GPKR DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH SKTQ +VSL ++E+E+I AGE VKEALF R VLS IAPET+ +SI VL D+Q A AL++NPLSSARSKHIDVR+HFIR LFR+ +IS+++V++++QHAD+ TKALS+++ QYH
Sbjct: 1477 CPSSASIKLMLAVANEKSLKL-------NHWDVKQA--FTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKM---KDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGMTLR-ISQTAYIDIVNRFDVQSTSSIPASPGVDIGPKRDDESGGEWPVREAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLEVYVDASYADAED-RRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVSTSEQHADMLTKALSKSSLQYH 1889
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KQ05_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ05_9PHAE) HSP 1 Score: 212 bits (540), Expect = 6.640e-59 Identity = 143/366 (39.07%), Postives = 199/366 (54.37%), Query Frame = 1
Query: 550 PFSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWLEGRKKTTSLSSYLLTKTNKQTT*ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVLD-SQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
P++ ++ ++++L G + S RAIY LKQS R+WG+ A TL+E CVF + + + + V + G + L KTN ++G W +++RFDV STS IPASP DLGPK+ DE GG WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTV+SH S TQ +VS+ ++E+E+I AGE VKEALF R VLS + PET+ +SI VLD +Q A AL++NPL S R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 144 PYTHPTLDEEVFLRLPAGCGDKSHKIVKAERAIYGLKQSGRQWGYHAAGTLVESRFEQCKADPCVFRKM-VDEVVVMIIVIYLDDILVAGSDEDCEELLASLNKTNPT-------NSLGEC-----EWFDG-MVRRFDVQSTSRIPASPGADLGPKQGDEKGGQWPVREAIGSMMWVSTFSRPDVSFAVRAWDAIQKIVGYSKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVISHGSNTQSIVSVSSTEAEYIAAGEGVKEALFVRAVLSFVPPETSGSSIEVLDDNQGAIALVQNPLRSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 494
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KJM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM0_9PHAE) HSP 1 Score: 201 bits (511), Expect = 7.880e-58 Identity = 117/223 (52.47%), Postives = 147/223 (65.92%), Query Frame = 1
Query: 922 LMKRFDVHSTSDIPASPV-DLGPKRKDEPGGDWPVRKAFRGSLWLSTWN---------TDADYTDKDNSRR------------------LVY----GVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
+++ FDV STS IPASP DLGPKR+DE GG+WPVR+A +W+S ++ T A + R + Y GVA T+GGTVVSH SKTQ +VSL ++E+E+I GE VK ALF R VLS IAPET+ +SI VL D+Q A AL++NPLSS R+KHIDVRFHFIR LFR+ NISV +V + +QHAD+ TKALSRA+ QYH
Sbjct: 1 MVEHFDVQSTSRIPASPGGDLGPKREDEEGGEWPVREAIGSMMWVSNFSRPDVSSAVCTVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGVATTVGGTVVSHGSKTQSIVSLSSTEAEYIATGEGVKGALFVRAVLSFIAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRFHFIRGLFRSGNISVNFVPTTEQHADVLTKALSRASLQYH 223
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.350e-56 Identity = 151/387 (39.02%), Postives = 207/387 (53.49%), Query Frame = 1
Query: 553 FSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWL------EGRKKTTSLSSYLLTKTNKQTT*----ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
++ ++ +++KL G + S RAIY LKQS R+WG+ ADTL+E CVF R + + + + L + + SL+ TK + A TLR ++++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 854 YTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVF--RKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1237
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.570e-56 Identity = 151/387 (39.02%), Postives = 207/387 (53.49%), Query Frame = 1
Query: 553 FSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWL------EGRKKTTSLSSYLLTKTNKQTT*----ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
++ ++ +++KL G + S RAIY LKQS R+WG+ ADTL+E CVF R + + + + L + + SL+ TK + A TLR ++++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 1233 YTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVF--RKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1616
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 214 bits (546), Expect = 1.620e-56 Identity = 151/387 (39.02%), Postives = 207/387 (53.49%), Query Frame = 1
Query: 553 FSITGVERSLYMKLRGGYDENS-------RAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWL------EGRKKTTSLSSYLLTKTNKQTT*----ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
++ ++ +++KL G + S RAIY LKQS R+WG+ ADTL+E CVF R + + + + L + + SL+ TK + A TLR ++++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 1396 YTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVF--RKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 1779
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5L060_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L060_9PHAE) HSP 1 Score: 214 bits (544), Expect = 2.530e-56 Identity = 151/367 (41.14%), Postives = 200/367 (54.50%), Query Frame = 1
Query: 607 DENSRAIYALKQSERKWGHLYADTLIEMVSSNASLT-CVFSER*LTKPSL*SSVSTWTTCWLEGRKKT-----TSLSSYLLTKTNKQTT*----ASAHGTMGATLREM*NWAQSNLMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYHWKHWMR 1509
DE RAIY LKQS R+WG+ ADTL+E CVF + + + ++ V + G + SL+ TK + A G TLR +++KRFDV STS IPA+P VDL PKR+DE GG+WP R+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDV FHFIR LFR+ +ISV++V + +QHAD+ TKALSRA+ YH + M+
Sbjct: 908 DEAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKM-VDEVAVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVKGGTLRISQTAYIGSMVKRFDVQSTSRIPATPGVDLVPKREDEEGGEWPRREAIGSMMWVSTFSLPDVSFAVRAVARHAHAPAKRHWDAIQKTLGYLKETRDLGIAYQRGSGLGLAMYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVTFHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRASLLYHRRKLMK 1272
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KCA5_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCA5_9PHAE) HSP 1 Score: 196 bits (498), Expect = 1.620e-55 Identity = 117/251 (46.61%), Postives = 151/251 (60.16%), Query Frame = 1
Query: 922 LMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPL-----SSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
+++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T GGTVVSH SK Q +VSL ++E+EHI AGE VKEALF R VLS +APET +SI VL D+Q AL++NPL SS R+KHIDVRFHFIR LFR+ +I+V++V + +QHAD+ T+ALSRA+ QYH
Sbjct: 1 MVERFDVKSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTGGGTVVSHGSKKQSIVSLSSTEAEHIAAGEGVKEALFMRAVLSFVAPETRGSSIQVLEDNQGGMALVQNPLVQNPLSSGRTKHIDVRFHFIRGLFRSGDITVKFVPTTEQHADLLTQALSRASLQYH 250
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Match: A0A6H5KGN1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGN1_9PHAE) HSP 1 Score: 206 bits (523), Expect = 3.530e-54 Identity = 118/246 (47.97%), Postives = 154/246 (62.60%), Query Frame = 1
Query: 922 LMKRFDVHSTSDIPASP-VDLGPKRKDEPGGDWPVRKAFRGSLWLSTWN------------------------------------------------------TDADYTDKDNSRRLVYGVAVTLGGTVVSHMSKTQRVVSLLTSESEHIPAGEAVKEALFERVVLSCIAPETNEASINVL-DSQRAKALIENPLSSARSKHIDVRFHFIRALFRTRNISVEYVASAKQHADIFTKALSRANFQYH 1491
+++RFDV STS IPA+P DLGPKR+DE GG+WPVR+A +W+ST++ DA Y D ++ RR V G+A T+GGTVVSH SKTQ +VSL ++E+E+I AGE VKEALF R VLS +APET+ +SI VL D+Q A AL++NPLSS R+KHIDVR+HFIR LFR+ +ISV++V + +QHAD+ TKALSR + QYH
Sbjct: 601 MVERFDVQSTSRIPATPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTED-RRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIQVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTTEQHADLLTKALSRVSLQYH 845 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16373.4031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16373.4031.1 >prot_H-elongata_contig16373.4031.1 ID=prot_H-elongata_contig16373.4031.1|Name=mRNA_H-elongata_contig16373.4031.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=200bp MKRFDVHSTSDIPASPVDLGPKRKDEPGGDWPVRKAFRGSLWLSTWNTDAback to top mRNA from alignment at H-elongata_contig16373:2206..3928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16373.4031.1 ID=mRNA_H-elongata_contig16373.4031.1|Name=mRNA_H-elongata_contig16373.4031.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1723bp|location=Sequence derived from alignment at H-elongata_contig16373:2206..3928- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16373:2206..3928- >mRNA_H-elongata_contig16373.4031.1 ID=mRNA_H-elongata_contig16373.4031.1|Name=mRNA_H-elongata_contig16373.4031.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1200bp|location=Sequence derived from alignment at H-elongata_contig16373:2206..3928- (Himanthalia elongata Himel1 dioecious)back to top |