prot_H-elongata_contig163642.4025.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig163642.4025.1
Unique Nameprot_H-elongata_contig163642.4025.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length115
Homology
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: D7FKH8_ECTSI (Peptide n-glycanase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKH8_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 1.280e-50
Identity = 85/108 (78.70%), Postives = 94/108 (87.04%), Query Frame = 0
Query:    1 MSVREISSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGSA 108
            MSVRE+SSAEFYQLSRR EGKLLV +FTATWCGPCRR+APQYEALA+R P+VEFVKVYEHN+R+AII SGVRSFPTFHFY  G KVDECRGA I  VEQ   QH+ +A
Sbjct:    1 MSVREVSSAEFYQLSRRAEGKLLVTQFTATWCGPCRRIAPQYEALARRMPEVEFVKVYEHNSRDAIIASGVRSFPTFHFYVGGAKVDECRGANIAQVEQKANQHQAAA 108          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: D7G613_ECTSI (PUB domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 6.410e-29
Identity = 55/103 (53.40%), Postives = 74/103 (71.84%), Query Frame = 0
Query:    3 VREISSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHK 105
            V+E++    ++     +GKL+VV+FTA+WCGPC+RVAPQYE LA ++PDV F+KV E +N+E I +  +R+FPTF FY  G +VDE RGA IQ V   V QHK
Sbjct:    2 VQEVAGESEFRRLTGQKGKLVVVDFTASWCGPCKRVAPQYEQLASQHPDVLFLKVVEDSNKELIQSLSIRAFPTFRFYLEGNQVDETRGANIQEVASKVVQHK 104          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A7S3XV36_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XV36_HETAK)

HSP 1 Score: 110 bits (274), Expect = 8.080e-28
Identity = 51/103 (49.51%), Postives = 68/103 (66.02%), Query Frame = 0
Query:    3 VREISSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHK 105
            V E++  E ++       KL VV+FTATWCGPC+RVAP YE+L+ + PDV F+KV E   ++ I   G+R+FPTF FY  G +VDE +GA I  VEQ V  H+
Sbjct:   91 VHEVTGTEDFRQQLSAPNKLCVVDFTATWCGPCKRVAPMYESLSHKYPDVNFIKVVESTCQDLITQLGIRAFPTFRFYLGGQQVDEVQGADIGAVEQKVLAHR 193          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A835Z023_9STRA (PUB domain, zinc finger protein thioredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z023_9STRA)

HSP 1 Score: 111 bits (278), Expect = 2.580e-26
Identity = 52/107 (48.60%), Postives = 74/107 (69.16%), Query Frame = 0
Query:    3 VREISSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGSAR 109
            V E+   E +    + +GKL+VV+ +ATWCGPC+RVAP+Y+AL+ + PDV F+KV E  N++ I+  GV +FPTF FY +G KVDE +GA I  VE+ V +H+   R
Sbjct:    2 VHEVVGQEEFARLTQQKGKLVVVDVSATWCGPCKRVAPEYDALSGKYPDVVFLKVMEGENQDLIMTLGVTAFPTFLFYVDGAKVDEVKGANIAAVEECVVRHRARVR 108          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A4D9D704_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.540e-24
Identity = 51/107 (47.66%), Postives = 76/107 (71.03%), Query Frame = 0
Query:    3 VREISSAEFYQLSRRM-EGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGSA 108
            V+EI+S    +L R +  G+L+V++FTA+WCGPCR  APQ+EA+A+R PDV F KV E N+++ I + G+++FPTF  Y N   ++E RGA +  +E  VQ+H+ SA
Sbjct:    2 VQEITSGA--ELRRMVGSGRLVVIDFTASWCGPCRMAAPQFEAMARRYPDVVFAKVVEDNSKDIIASEGIQAFPTFRVYLNSQMLEEFRGANMGALEAAVQRHQASA 106          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A1W0A0E5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A0E5_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.510e-23
Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 0
Query:   20 GKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGSARYVPAA 114
            GKL+VV+FTA+WCGPC+ + P++ A A + P+V F++V E NN + I + G+R FPTFHFY N  KVDE  GA    ++  ++  + SA Y P A
Sbjct:   21 GKLVVVDFTASWCGPCQMIKPRFHAFASQYPNVVFLEVNEANNEDLIHSIGIRGFPTFHFYINKSKVDELVGADPNTLQNKIETWQASAGYNPFA 115          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A8J5BQ48_9DIPT (Uncharacterized protein n=2 Tax=Bradysia TaxID=35571 RepID=A0A8J5BQ48_9DIPT)

HSP 1 Score: 97.4 bits (241), Expect = 3.200e-22
Identity = 46/108 (42.59%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    1 MSVREISSAEFYQLSRRMEG-KLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGS 107
            MSV+ I+    +Q   +  G KL+VV+FTATWCGPC+R+AP +E    + P   F+KV     ++   N GV++ PTF FY N  K+D  +GA ++ +E  +QQH GS
Sbjct:    1 MSVKSINDESHFQAELQAAGIKLVVVDFTATWCGPCQRIAPHFETFPSKYPRAIFLKVDVDKCQDTAANQGVQAMPTFIFYRNKSKIDRVQGASVEALEAKIQQHIGS 108          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A7S4K0Z3_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4K0Z3_9EUKA)

HSP 1 Score: 93.2 bits (230), Expect = 3.490e-22
Identity = 43/85 (50.59%), Postives = 56/85 (65.88%), Query Frame = 0
Query:   21 KLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHK 105
            KL+VV+FTATWCGPC+R+AP +  LA++ PDV FVKV    N +     GV S PTF F   G KV E  GA  +N++Q + +HK
Sbjct:   37 KLVVVDFTATWCGPCKRIAPFFAELAEQMPDVVFVKVDVDENEDVAEACGVNSMPTFQFMIKGKKVHEFSGASQENIKQAIAKHK 121          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A1V9Z195_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z195_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.660e-22
Identity = 48/115 (41.74%), Postives = 72/115 (62.61%), Query Frame = 0
Query:    1 MSVREI-SSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHKGSARYVPAA 114
            M V+E+  S+++    R   GKL+V +FTA+WCGPC+ + P++  +A R  DV F++V E +N + I + G+R FPTFHFY N  KVDE  GA    ++  ++  + SA Y P A
Sbjct:    1 MGVQEVFGSSDWDAKHRAAGGKLVVADFTASWCGPCQMIKPRFHEMASRYTDVVFLEVNEAHNDDLIHSIGIRGFPTFHFYINQQKVDEMVGADANTLQSKIETWRASAGYNPFA 115          
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Match: A0A6U0IHX1_9STRA (Thioredoxin n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A6U0IHX1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 8.580e-22
Identity = 42/96 (43.75%), Postives = 59/96 (61.46%), Query Frame = 0
Query:   10 EFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNPDVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQGVQQHK 105
            E+  L    + KL+VV+FTA+WCGPC+ +AP +E +A  NPD+ FVKV   +  +     G+ + PTF FY  G +VDE RGA    +E  V +HK
Sbjct:    9 EWSALMEESKSKLVVVDFTASWCGPCQMIAPVFEKMASENPDITFVKVDVDDAEDIAAACGISAMPTFQFYKGGTRVDEFRGANTSQLEALVAKHK 104          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163642.4025.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FKH8_ECTSI1.280e-5078.70Peptide n-glycanase, putative n=2 Tax=Ectocarpus T... [more]
D7G613_ECTSI6.410e-2953.40PUB domain, zinc finger protein Thioredoxin n=1 Ta... [more]
A0A7S3XV36_HETAK8.080e-2849.51Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A835Z023_9STRA2.580e-2648.60PUB domain, zinc finger protein thioredoxin n=1 Ta... [more]
A0A4D9D704_9STRA1.540e-2447.66Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A1W0A0E5_9STRA4.510e-2347.37Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8J5BQ48_9DIPT3.200e-2242.59Uncharacterized protein n=2 Tax=Bradysia TaxID=355... [more]
A0A7S4K0Z3_9EUKA3.490e-2250.59Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A1V9Z195_9STRA6.660e-2241.74Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6U0IHX1_9STRA8.580e-2243.75Thioredoxin n=1 Tax=Minutocellus polymorphus TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00421THIOREDOXINcoord: 31..40
score: 62.28
coord: 23..31
score: 50.25
coord: 70..81
score: 37.96
NoneNo IPR availableGENE3D3.40.30.10coord: 2..113
e-value: 1.2E-26
score: 94.9
NoneNo IPR availablePANTHERPTHR46115FAMILY NOT NAMEDcoord: 1..109
NoneNo IPR availablePANTHERPTHR46115:SF1THIOREDOXIN-LIKE PROTEIN 1coord: 1..109
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 6..93
e-value: 1.1E-20
score: 73.5
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 1..114
score: 10.913
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 24..42
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 2..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig163642contigH-elongata_contig163642:543..1286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig163642.4025.1mRNA_H-elongata_contig163642.4025.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig163642 543..1286 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig163642.4025.1 ID=prot_H-elongata_contig163642.4025.1|Name=mRNA_H-elongata_contig163642.4025.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=115bp
MSVREISSAEFYQLSRRMEGKLLVVEFTATWCGPCRRVAPQYEALAQRNP
DVEFVKVYEHNNREAIINSGVRSFPTFHFYCNGGKVDECRGAIIQNVEQG
VQQHKGSARYVPAA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf