prot_H-elongata_contig163576.4023.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig163576.4023.1
Unique Nameprot_H-elongata_contig163576.4023.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length65
Homology
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Match: D7FKC6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKC6_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 9.410e-24
Identity = 46/62 (74.19%), Postives = 54/62 (87.10%), Query Frame = 0
Query:    1 RFGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEEVLARADHLLEVG 62
            RFG+VK ECRRAA++PEQAGNG+ GHLVA+ LA +TFAPKGMV+GD  E VLARAD+LLE G
Sbjct:  491 RFGIVKAECRRAALVPEQAGNGMMGHLVASALAKITFAPKGMVEGDEAEGVLARADYLLEAG 552          
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Match: A0A6H5L3V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3V0_9PHAE)

HSP 1 Score: 101 bits (252), Expect = 1.340e-23
Identity = 45/61 (73.77%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    2 FGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEEVLARADHLLEVG 62
            FG+VK ECRRAA++P+QAGNG+ GHLVA+ LA +TFAPKGMV+GD  E VLARADHLLE G
Sbjct:  731 FGIVKAECRRAALVPQQAGNGMMGHLVASALAKITFAPKGMVEGDEAEAVLARADHLLEAG 791          
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Match: W7TLX9_9STRA (Mitochondrial inner membrane protein Mitofilin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TLX9_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.050e-8
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 RFGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEEVLARADHLLEVG 62
            RF +V+   R AA +PE +  G+ GH+ A LLA+VT  P+G+V+G G +E LARA + +E G
Sbjct:  371 RFPMVQKAAREAAFVPESSP-GMVGHMFAGLLAAVTIQPRGLVEGSGADETLARAAYHVERG 431          
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Match: K8ZAZ5_NANGC (Mitochondrion protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8ZAZ5_NANGC)

HSP 1 Score: 59.3 bits (142), Expect = 1.060e-8
Identity = 29/62 (46.77%), Postives = 42/62 (67.74%), Query Frame = 0
Query:    1 RFGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEEVLARADHLLEVG 62
            RF +V+   R AA +PE +  G+ GH+ A LLA+VT  P+G+V+G G +E LARA + +E G
Sbjct:  574 RFPMVQKAAREAAFVPESSP-GMVGHMFAGLLAAVTIQPRGLVEGSGADETLARAAYHVERG 634          
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Match: A0A835YW45_9STRA (Mitochondrial inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW45_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.590e-6
Identity = 27/62 (43.55%), Postives = 37/62 (59.68%), Query Frame = 0
Query:    1 RFGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEEVLARADHLLEVG 62
            RF  V+ E  RAA++P   G G+ G  V  LL+  T    GMV+G   ++VLARA+ LL+ G
Sbjct:  554 RFARVRGEAARAALVPGGDGAGVMGQAVGALLSVFTLPRHGMVEGSSADDVLARAECLLDGG 615          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163576.4023.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKC6_ECTSI9.410e-2474.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L3V0_9PHAE1.340e-2373.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TLX9_9STRA1.050e-846.77Mitochondrial inner membrane protein Mitofilin n=1... [more]
K8ZAZ5_NANGC1.060e-846.77Mitochondrion protein n=2 Tax=Monodopsidaceae TaxI... [more]
A0A835YW45_9STRA1.590e-643.55Mitochondrial inner membrane protein-domain-contai... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019133Mitochondrial inner membrane protein MitofilinPFAMPF09731Mitofilincoord: 1..62
e-value: 1.1E-10
score: 41.0
IPR019133Mitochondrial inner membrane protein MitofilinPANTHERPTHR15415MITOFILINcoord: 1..62
NoneNo IPR availablePANTHERPTHR15415:SF7MICOS COMPLEX SUBUNIT MIC60coord: 1..62
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig163576contigH-elongata_contig163576:689..883 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig163576.4023.1mRNA_H-elongata_contig163576.4023.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig163576 689..883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig163576.4023.1 ID=prot_H-elongata_contig163576.4023.1|Name=mRNA_H-elongata_contig163576.4023.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=65bp
RFGVVKTECRRAAMIPEQAGNGLFGHLVATLLASVTFAPKGMVDGDGPEE
VLARADHLLEVGVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019133Mt-IM_prot_Mitofilin