prot_H-elongata_contig163389.4016.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig163389.4016.1
Unique Nameprot_H-elongata_contig163389.4016.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length39
Homology
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A3P3Y1V4_PLABS (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y1V4_PLABS)

HSP 1 Score: 70.9 bits (172), Expect = 2.890e-13
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVEVLQWFV+PGDR++QFDK+CEVQSDK 
Sbjct:   94 DIGEGIAEVEVLQWFVKPGDRIQQFDKICEVQSDKA 129          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A455ZA82_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Thraustochytrium sp. LLF1b TaxID=1112570 RepID=A0A455ZA82_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.890e-13
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVEVLQWFVEPGD V+QFDK+CEVQSDK 
Sbjct:   37 DIGEGIAEVEVLQWFVEPGDTVKQFDKICEVQSDKA 72          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: R1C8Z5_EMIHU (3-methyl-2-oxobutanoate dehydrogenase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C8Z5_EMIHU)

HSP 1 Score: 66.6 bits (161), Expect = 1.290e-12
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVEVLQWFV+PGD V QFD++CEVQSDK 
Sbjct:   57 DIGEGIAEVEVLQWFVKPGDTVDQFDRICEVQSDKA 92          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: D7FZ94_ECTSI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ94_ECTSI)

HSP 1 Score: 68.9 bits (167), Expect = 1.380e-12
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGILEVEVLQW+V PGD V QFDKLCEVQSDK 
Sbjct:  154 DIGEGILEVEVLQWYVAPGDSVSQFDKLCEVQSDKA 189          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A6H5JFR0_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFR0_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 2.490e-12
Identity = 30/36 (83.33%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            ++GEGILEVEVLQWFV PGD V QFDKLCEVQSDK 
Sbjct:    9 NIGEGILEVEVLQWFVAPGDSVSQFDKLCEVQSDKA 44          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A192ZI97_9EUKA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Stygiella incarcerata TaxID=1712417 RepID=A0A192ZI97_9EUKA)

HSP 1 Score: 67.8 bits (164), Expect = 3.510e-12
Identity = 29/36 (80.56%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVEVLQWFV+PGD+V QFD LCEVQSDK 
Sbjct:   32 DIGEGIKEVEVLQWFVKPGDKVEQFDPLCEVQSDKA 67          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A7S1CPA0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CPA0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.570e-12
Identity = 28/36 (77.78%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVEVLQWFV PGD V QFD +CEVQSDK 
Sbjct:   26 DIGEGIAEVEVLQWFVGPGDTVAQFDPVCEVQSDKA 61          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A7S3BSJ7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BSJ7_9EUKA)

HSP 1 Score: 63.9 bits (154), Expect = 4.720e-12
Identity = 27/36 (75.00%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EVE+LQWFV+PGD V+QFD+L EVQSDK 
Sbjct:   57 DIGEGIAEVEILQWFVKPGDLVQQFDRLVEVQSDKA 92          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A6G1H887_9PEZI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Aulographum hederae CBS 113979 TaxID=1176131 RepID=A0A6G1H887_9PEZI)

HSP 1 Score: 67.4 bits (163), Expect = 4.800e-12
Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI EV+V+QWFVEPG RV QFDK+CEVQSDK 
Sbjct:   56 DIGEGITEVQVIQWFVEPGARVEQFDKICEVQSDKA 91          
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Match: A0A507CTQ6_9FUNG (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CTQ6_9FUNG)

HSP 1 Score: 67.4 bits (163), Expect = 4.800e-12
Identity = 26/36 (72.22%), Postives = 32/36 (88.89%), Query Frame = 0
Query:    1 DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKV 36
            D+GEGI E E++QWFV+PGDR+ QFDK+CEVQSDK 
Sbjct:   74 DIGEGIAECEIIQWFVKPGDRIEQFDKICEVQSDKA 109          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig163389.4016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3P3Y1V4_PLABS2.890e-1380.56Dihydrolipoamide acetyltransferase component of py... [more]
A0A455ZA82_9STRA2.890e-1383.33Dihydrolipoamide acetyltransferase component of py... [more]
R1C8Z5_EMIHU1.290e-1277.783-methyl-2-oxobutanoate dehydrogenase (Fragment) n... [more]
D7FZ94_ECTSI1.380e-1283.33Dihydrolipoamide acetyltransferase component of py... [more]
A0A6H5JFR0_9PHAE2.490e-1283.33Dihydrolipoamide acetyltransferase component of py... [more]
A0A192ZI97_9EUKA3.510e-1280.56Dihydrolipoamide acetyltransferase component of py... [more]
A0A7S1CPA0_9STRA3.570e-1277.78Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S3BSJ7_9EUKA4.720e-1275.00Hypothetical protein (Fragment) n=1 Tax=Haptolina ... [more]
A0A6G1H887_9PEZI4.800e-1277.78Dihydrolipoamide acetyltransferase component of py... [more]
A0A507CTQ6_9FUNG4.800e-1272.22Dihydrolipoamide acetyltransferase component of py... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000089Biotin/lipoyl attachmentPFAMPF00364Biotin_lipoylcoord: 1..36
e-value: 1.5E-8
score: 34.3
NoneNo IPR availableGENE3D2.40.50.100coord: 1..37
e-value: 3.2E-10
score: 41.6
NoneNo IPR availablePANTHERPTHR43178:SF5LIPOAMIDE ACYLTRANSFERASE COMPONENT OF BRANCHED-CHAIN ALPHA-KETO ACID DEHYDROGENASE COMPLEX, MITOCHONDRIALcoord: 1..35
NoneNo IPR availablePANTHERPTHR43178FAMILY NOT NAMEDcoord: 1..35
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 1..36

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig163389contigH-elongata_contig163389:123..239 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig163389.4016.1mRNA_H-elongata_contig163389.4016.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig163389 123..239 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig163389.4016.1 ID=prot_H-elongata_contig163389.4016.1|Name=mRNA_H-elongata_contig163389.4016.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=39bp
DVGEGILEVEVLQWFVEPGDRVRQFDKLCEVQSDKVGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif