prot_H-elongata_contig16324.4010.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16324.4010.1
Unique Nameprot_H-elongata_contig16324.4010.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length667
Homology
BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Match: D7FX28_ECTSI (Foie-gras_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX28_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.810e-152
Identity = 335/718 (46.66%), Postives = 396/718 (55.15%), Query Frame = 0
Query:    1 PFTQTLDVEVDASRLVAKVSVRFSAAEASAGDVLFLGVALLSLLPVDVRLESVELVFNHAAINCIIRD-------------GGSDFKNGQDVKVNSHSNLVDLALPAMGLLRADARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGVGVGLLVPAGAAGAIADEPG-GEKWARTSGFECVQLVPPRARARISIVETPTLLVGLVGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGFLHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRPERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGISLPSSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGLEGR-PLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPLQVSRCRAGQFCREMRSRPL-------ERSGHAVAVKVSVTNLQEKRLVISRLEIVPPEKNDPSSLGGSIS---------------------SGGISGTGGGITRVDDVVGVAWANLPNGPVLHD---ATINSTSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREGGDR-----GMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEVSNPTTAYSTMHLTADEG 667
            P ++ L+V VD S L+ ++S RFSAAEASAGD L L VAL+SLLP+D RLE++EL FNH+A+NC IRD             G SD  +          +  DL L A GLL A+  +C+P     L S EPLRL+ AR  +   G  +V    A    GV LLVP+G    IA E G G  WAR  GFE V+LVPPRARA + I E  ++L+ L  RLLV VS    + VA P     + +  +  G   GC GK P PFR GFLHLECEPAPVPPPIV   +  A                       ARPRPERAFFW P  ++    GED S    V  S    GF+P+VVGSDGQP+ GI LP    L    PS KEE     R V VPVWVRSETAG+VAVRARV+YGL G+ P AA               E V+ TEWA AEVLCVRP+++AVDVV +     R  +                 ERSGH VAVKVS+TNLQEKRLV+SR+E+VP                                     G  GT            V WA LPNGPVLHD   AT  S    GGV+ L G GD+YTCCF A G+A  PAPLG+LRVTW+P       G       G    A    TEFPLPVL+ARPPALSARL+APPHARVGVEFS+SWE+SN T  YS+M LT ++G
Sbjct:  690 PASERLEVTVDDSLLLLRLSGRFSAAEASAGDGLALRVALMSLLPLDTRLEAIELAFNHSALNCTIRDTQSTGPAGATPAAGNSDPPSSSSCPDQQQPS-ADLTLRAGGLLTANVGLCLPWSG--LPSSEPLRLVEARVPLTNRGGGDVAAAPAAAASGVTLLVPSGPGSDIAREGGEGGAWARAPGFEAVRLVPPRARAHVRIAEPSSVLLDLTTRLLVTVSK---APVATPAAGATAKSSERRGGGSGGC-GKPPHPFRDGFLHLECEPAPVPPPIVSPHS--AXXXXXXXXXXXXXXXXXXXXXXXARPRPERAFFWAPATTSARTGGEDPS----VAVSDGKGGFLPVVVGSDGQPLEGIPLP----LSSLDPSRKEEEEEEAREVTVPVWVRSETAGKVAVRARVVYGLGGKSPGAAGXXXXXXXXXXXXAEEAVAVTEWARAEVLCVRPLAMAVDVVSVPADEGRGSRGXXXXXXXXXXXAPWACERSGHTVAVKVSLTNLQEKRLVVSRMEVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGAEGT------------VTWATLPNGPVLHDDDSATAASGGSDGGVVALPGTGDTYTCCFAAKGEAERPAPLGKLRVTWRPDETGEGDGPTTSPTTGGGEAAVGGVTEFPLPVLTARPPALSARLKAPPHARVGVEFSMSWEISNLTAVYSSMQLTTEDG 1378          
BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Match: A0A6H5J7Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z5_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 9.010e-132
Identity = 300/669 (44.84%), Postives = 349/669 (52.17%), Query Frame = 0
Query:   54 ELVFNHAAINCIIRDGGSDFKNGQDVKVNS------------HSNLVDLALPAMGLLRADARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGV--GVGLLVPAGAAGAIADEPG-GEKWARTSGFECVQLVPPRARARISIVETPTLLVGLVGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGFLHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRPERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGISLP-SSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGLEGR-PLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPLQVSRCRAGQFCREMRSRPL------ERSGHAVAVKVSVTNLQEKRLVISRLEIVPPEKNDPSSLGGSIS-------------------SGGISGTGGGITRVDDVVGVAWANLPNGPVLHD------ATINSTSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREGGD-------RGMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEVSNPTTAYSTMHLTADEG 667
             L FNH+A+NC IRD  S    G      +              +  DL L A GLL A+  +C+P  A  L S EPLRL+ AR L+   G               GV LLVP+G    IA E G G  WAR  GFE V+LVPPRARA + I E  ++L+ L  RLLV VS    +  A   T++ S      SG   GC GK P PFRGGFLHLECEPAPVPPPIV   +                          ARPRPERAFFW P  +A    GED     SV  S    GF+P+VVGSDGQP+ GI LP SS   FR    E +E       V VPVWVRSETAG+VA+RARV+YGL G+ P AA               EGV+ TEWA AEVLCVRP+++AVDVV +     R  +                ERSGH VAVKVS+TNLQEKRLV+SR+E+VP                                  GG  GT            V WA LPNGPVLHD                 V+ L G GD+YTCCF A G+A  PAPLG+LRVTW+P      GGD        G    A    TEFPLPVL+ARPPALSARL+APPHARVGVEFS+SWE+SN T  YS M LT ++G
Sbjct:  230 SLAFNHSALNCTIRDTRSTGPAGAPPAAENXXXXXXSSCPDPQQHSADLTLRAGGLLTANVGLCLPWSA--LPSSEPLRLVEARVLLTKRGXXXXXXXXXXXXXXSGVTLLVPSGQGSDIALEGGEGGAWARAPGFEAVRLVPPRARAHVRIAEPSSVLLDLTTRLLVTVSKAPVATPAAGATAKLSER----SGGGSGCCGKPPHPFRGGFLHLECEPAPVPPPIVSPHSXXXXXXXXXXXXXXXXXXXX--XXXXARPRPERAFFWAPATTAARTGGED----SSVAVSDGKGGFLPVVVGSDGQPLEGIPLPLSSIDPFREEEEEVQE-------VTVPVWVRSETAGKVAIRARVVYGLGGKSPGAAGXXXXXXXXXXXEAEEGVAVTEWARAEVLCVRPLAMAVDVVSVPADEGRGSRGXXXXXXXXXXAPWACERSGHTVAVKVSLTNLQEKRLVVSRMEVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGAEGT------------VTWATLPNGPVLHDDDAAXXXXXXXXXXXXXVVALPGTGDTYTCCFTAKGEAERPAPLGKLRVTWRPDDT--GGGDGPTTSPATGGGEAAVGGVTEFPLPVLTARPPALSARLKAPPHARVGVEFSMSWEISNLTAVYSAMQLTTEDG 865          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX28_ECTSI1.810e-15246.66Foie-gras_1 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5J7Z5_9PHAE9.010e-13244.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR14374FOIE GRAScoord: 380..657

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16324contigH-elongata_contig16324:448..6544 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16324.4010.1mRNA_H-elongata_contig16324.4010.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16324 448..6544 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16324.4010.1 ID=prot_H-elongata_contig16324.4010.1|Name=mRNA_H-elongata_contig16324.4010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=667bp
PFTQTLDVEVDASRLVAKVSVRFSAAEASAGDVLFLGVALLSLLPVDVRL
ESVELVFNHAAINCIIRDGGSDFKNGQDVKVNSHSNLVDLALPAMGLLRA
DARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGVGVGLL
VPAGAAGAIADEPGGEKWARTSGFECVQLVPPRARARISIVETPTLLVGL
VGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGF
LHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRP
ERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGI
SLPSSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGL
EGRPLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPL
QVSRCRAGQFCREMRSRPLERSGHAVAVKVSVTNLQEKRLVISRLEIVPP
EKNDPSSLGGSISSGGISGTGGGITRVDDVVGVAWANLPNGPVLHDATIN
STSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREG
GDRGMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEV
SNPTTAYSTMHLTADEG
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