mRNA_H-elongata_contig16324.4010.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16324.4010.1
Unique NamemRNA_H-elongata_contig16324.4010.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Match: D7FX28_ECTSI (Foie-gras_1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX28_ECTSI)

HSP 1 Score: 486 bits (1252), Expect = 1.810e-152
Identity = 335/718 (46.66%), Postives = 396/718 (55.15%), Query Frame = 1 
Query:    1 PFTQTLDVEVDASRLVAKVSVRFSAAEASAGDVLFLGVALLSLLPVDVRLESVELVFNHAAINCIIRD-------------GGSDFKNGQDVKVNSHSNLVDLALPAMGLLRADARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGVGVGLLVPAGAAGAIADEPG-GEKWARTSGFECVQLVPPRARARISIVETPTLLVGLVGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGFLHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRPERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGISLPSSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGLEGR-PLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPLQVSRCRAGQFCREMRSRPL-------ERSGHAVAVKVSVTNLQEKRLVISRLEIVPPEKNDPSSLGGSIS---------------------SGGISGTGGGITRVDDVVGVAWANLPNGPVLHD---ATINSTSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREGGDR-----GMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEVSNPTTAYSTMHLTADEG 2001
            P ++ L+V VD S L+ ++S RFSAAEASAGD L L VAL+SLLP+D RLE++EL FNH+A+NC IRD             G SD  +          +  DL L A GLL A+  +C+P     L S EPLRL+ AR  +   G  +V    A    GV LLVP+G    IA E G G  WAR  GFE V+LVPPRARA + I E  ++L+ L  RLLV VS    + VA P     + +  +  G   GC GK P PFR GFLHLECEPAPVPPPIV   +  A                       ARPRPERAFFW P  ++    GED S    V  S    GF+P+VVGSDGQP+ GI LP    L    PS KEE     R V VPVWVRSETAG+VAVRARV+YGL G+ P AA               E V+ TEWA AEVLCVRP+++AVDVV +     R  +                 ERSGH VAVKVS+TNLQEKRLV+SR+E+VP                                     G  GT            V WA LPNGPVLHD   AT  S    GGV+ L G GD+YTCCF A G+A  PAPLG+LRVTW+P       G       G    A    TEFPLPVL+ARPPALSARL+APPHARVGVEFS+SWE+SN T  YS+M LT ++G
Sbjct:  690 PASERLEVTVDDSLLLLRLSGRFSAAEASAGDGLALRVALMSLLPLDTRLEAIELAFNHSALNCTIRDTQSTGPAGATPAAGNSDPPSSSSCPDQQQPS-ADLTLRAGGLLTANVGLCLPWSG--LPSSEPLRLVEARVPLTNRGGGDVAAAPAAAASGVTLLVPSGPGSDIAREGGEGGAWARAPGFEAVRLVPPRARAHVRIAEPSSVLLDLTTRLLVTVSK---APVATPAAGATAKSSERRGGGSGGC-GKPPHPFRDGFLHLECEPAPVPPPIVSPHS--AXXXXXXXXXXXXXXXXXXXXXXXARPRPERAFFWAPATTSARTGGEDPS----VAVSDGKGGFLPVVVGSDGQPLEGIPLP----LSSLDPSRKEEEEEEAREVTVPVWVRSETAGKVAVRARVVYGLGGKSPGAAGXXXXXXXXXXXXAEEAVAVTEWARAEVLCVRPLAMAVDVVSVPADEGRGSRGXXXXXXXXXXXAPWACERSGHTVAVKVSLTNLQEKRLVVSRMEVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSGAEGT------------VTWATLPNGPVLHDDDSATAASGGSDGGVVALPGTGDTYTCCFAAKGEAERPAPLGKLRVTWRPDETGEGDGPTTSPTTGGGEAAVGGVTEFPLPVLTARPPALSARLKAPPHARVGVEFSMSWEISNLTAVYSSMQLTTEDG 1378
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BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Match: A0A6H5J7Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Z5_9PHAE)

HSP 1 Score: 420 bits (1079), Expect = 9.010e-132
Identity = 300/669 (44.84%), Postives = 349/669 (52.17%), Query Frame = 1 
Query:  160 ELVFNHAAINCIIRDGGSDFKNGQDVKVNS------------HSNLVDLALPAMGLLRADARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGV--GVGLLVPAGAAGAIADEPG-GEKWARTSGFECVQLVPPRARARISIVETPTLLVGLVGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGFLHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRPERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGISLP-SSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGLEGR-PLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPLQVSRCRAGQFCREMRSRPL------ERSGHAVAVKVSVTNLQEKRLVISRLEIVPPEKNDPSSLGGSIS-------------------SGGISGTGGGITRVDDVVGVAWANLPNGPVLHD------ATINSTSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREGGD-------RGMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEVSNPTTAYSTMHLTADEG 2001
             L FNH+A+NC IRD  S    G      +              +  DL L A GLL A+  +C+P  A  L S EPLRL+ AR L+   G               GV LLVP+G    IA E G G  WAR  GFE V+LVPPRARA + I E  ++L+ L  RLLV VS    +  A   T++ S      SG   GC GK P PFRGGFLHLECEPAPVPPPIV   +                          ARPRPERAFFW P  +A    GED     SV  S    GF+P+VVGSDGQP+ GI LP SS   FR    E +E       V VPVWVRSETAG+VA+RARV+YGL G+ P AA               EGV+ TEWA AEVLCVRP+++AVDVV +     R  +                ERSGH VAVKVS+TNLQEKRLV+SR+E+VP                                  GG  GT            V WA LPNGPVLHD                 V+ L G GD+YTCCF A G+A  PAPLG+LRVTW+P      GGD        G    A    TEFPLPVL+ARPPALSARL+APPHARVGVEFS+SWE+SN T  YS M LT ++G
Sbjct:  230 SLAFNHSALNCTIRDTRSTGPAGAPPAAENXXXXXXSSCPDPQQHSADLTLRAGGLLTANVGLCLPWSA--LPSSEPLRLVEARVLLTKRGXXXXXXXXXXXXXXSGVTLLVPSGQGSDIALEGGEGGAWARAPGFEAVRLVPPRARAHVRIAEPSSVLLDLTTRLLVTVSKAPVATPAAGATAKLSER----SGGGSGCCGKPPHPFRGGFLHLECEPAPVPPPIVSPHSXXXXXXXXXXXXXXXXXXXX--XXXXARPRPERAFFWAPATTAARTGGED----SSVAVSDGKGGFLPVVVGSDGQPLEGIPLPLSSIDPFREEEEEVQE-------VTVPVWVRSETAGKVAIRARVVYGLGGKSPGAAGXXXXXXXXXXXEAEEGVAVTEWARAEVLCVRPLAMAVDVVSVPADEGRGSRGXXXXXXXXXXAPWACERSGHTVAVKVSLTNLQEKRLVVSRMEVVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGGAEGT------------VTWATLPNGPVLHDDDAAXXXXXXXXXXXXXVVALPGTGDTYTCCFTAKGEAERPAPLGKLRVTWRPDDT--GGGDGPTTSPATGGGEAAVGGVTEFPLPVLTARPPALSARLKAPPHARVGVEFSMSWEISNLTAVYSAMQLTTEDG 865
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16324.4010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX28_ECTSI1.810e-15246.66Foie-gras_1 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5J7Z5_9PHAE9.010e-13244.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16324contigH-elongata_contig16324:448..6544 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score490.0
Seed ortholog evalue1.8e-135
Seed eggNOG ortholog2880.D7FX28
KEGG koko:K02575,ko:K20308
KEGG TC2.A.1.8
KEGG Pathwayko00910,map00910
KEGG ModuleM00615
EggNOG free text desc.regulation of protein complex stability
EggNOG OGsKOG4386@1,KOG4386@2759
Ec32 ortholog descriptionDomain of unknown function DUF1683, C-terminal
Ec32 orthologEc-10_004060.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02000,ko04131
Hectar predicted targeting categoryother localisation
Exons8
Model size2001
Cds size2001
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16324.4010.1prot_H-elongata_contig16324.4010.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16324 448..6544 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929955.6013656-CDS-H-elongata_contig16324:447..6091622929955.6013656-CDS-H-elongata_contig16324:447..609Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 448..609 +
1691679222.4609942-CDS-H-elongata_contig16324:447..6091691679222.4609942-CDS-H-elongata_contig16324:447..609Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 448..609 +
1622929955.6766934-CDS-H-elongata_contig16324:1082..13391622929955.6766934-CDS-H-elongata_contig16324:1082..1339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 1083..1339 +
1691679222.476528-CDS-H-elongata_contig16324:1082..13391691679222.476528-CDS-H-elongata_contig16324:1082..1339Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 1083..1339 +
1622929955.6999547-CDS-H-elongata_contig16324:1753..18821622929955.6999547-CDS-H-elongata_contig16324:1753..1882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 1754..1882 +
1691679222.4870083-CDS-H-elongata_contig16324:1753..18821691679222.4870083-CDS-H-elongata_contig16324:1753..1882Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 1754..1882 +
1622929955.7170262-CDS-H-elongata_contig16324:2550..29561622929955.7170262-CDS-H-elongata_contig16324:2550..2956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 2551..2956 +
1691679222.5015829-CDS-H-elongata_contig16324:2550..29561691679222.5015829-CDS-H-elongata_contig16324:2550..2956Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 2551..2956 +
1622929955.7322469-CDS-H-elongata_contig16324:2989..34031622929955.7322469-CDS-H-elongata_contig16324:2989..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 2990..3403 +
1691679222.5132644-CDS-H-elongata_contig16324:2989..34031691679222.5132644-CDS-H-elongata_contig16324:2989..3403Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 2990..3403 +
1622929955.7503834-CDS-H-elongata_contig16324:3816..38851622929955.7503834-CDS-H-elongata_contig16324:3816..3885Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 3817..3885 +
1691679222.522593-CDS-H-elongata_contig16324:3816..38851691679222.522593-CDS-H-elongata_contig16324:3816..3885Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 3817..3885 +
1622929955.7627802-CDS-H-elongata_contig16324:5050..55531622929955.7627802-CDS-H-elongata_contig16324:5050..5553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 5051..5553 +
1691679222.531867-CDS-H-elongata_contig16324:5050..55531691679222.531867-CDS-H-elongata_contig16324:5050..5553Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 5051..5553 +
1622929955.7740502-CDS-H-elongata_contig16324:6483..65441622929955.7740502-CDS-H-elongata_contig16324:6483..6544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 6484..6544 +
1691679222.5436306-CDS-H-elongata_contig16324:6483..65441691679222.5436306-CDS-H-elongata_contig16324:6483..6544Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16324 6484..6544 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16324.4010.1

>prot_H-elongata_contig16324.4010.1 ID=prot_H-elongata_contig16324.4010.1|Name=mRNA_H-elongata_contig16324.4010.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=667bp
PFTQTLDVEVDASRLVAKVSVRFSAAEASAGDVLFLGVALLSLLPVDVRL
ESVELVFNHAAINCIIRDGGSDFKNGQDVKVNSHSNLVDLALPAMGLLRA
DARVCVPREAPALASGEPLRLLRARALVRWEGWVEVVWCIAGGGVGVGLL
VPAGAAGAIADEPGGEKWARTSGFECVQLVPPRARARISIVETPTLLVGL
VGRLLVEVSARVDSAVAKPDTSRESHAGSKDSGDCVGCYGKSPDPFRGGF
LHLECEPAPVPPPIVVEMAQPANVTPASLSASAPAVPSLPPLPLPARPRP
ERAFFWEPRFSARGIPGEDISGGGSVGASATVEGFIPIVVGSDGQPVSGI
SLPSSPPLFRPSPSEKEEGGGLTRVVIVPVWVRSETAGRVAVRARVIYGL
EGRPLAAATGELGGGLASATLGEGVSATEWASAEVLCVRPISVAVDVVPL
QVSRCRAGQFCREMRSRPLERSGHAVAVKVSVTNLQEKRLVISRLEIVPP
EKNDPSSLGGSISSGGISGTGGGITRVDDVVGVAWANLPNGPVLHDATIN
STSGGGGVIVLSGPGDSYTCCFNAVGDARYPAPLGRLRVTWKPQRIVREG
GDRGMAATAAIATTEFPLPVLSARPPALSARLRAPPHARVGVEFSLSWEV
SNPTTAYSTMHLTADEG
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mRNA from alignment at H-elongata_contig16324:448..6544+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16324.4010.1 ID=mRNA_H-elongata_contig16324.4010.1|Name=mRNA_H-elongata_contig16324.4010.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6097bp|location=Sequence derived from alignment at H-elongata_contig16324:448..6544+ (Himanthalia elongata Himel1 dioecious)
CCCTTTACACAGACGCTTGATGTGGAGGTGGACGCGTCGCGCCTCGTGGC
GAAGGTGTCTGTAAGGTTTTCCGCTGCGGAGGCGTCGGCGGGGGATGTCC
TATTTCTCGGCGTGGCGCTGCTGTCGCTGCTGCCGGTGGACGTCCGCTTG
GAAAGCGTGGAGGTGAGCAAGGAAATAAAACAAAAGGGAGCTTTCTACGA
CATACGAGTCGCTTTTCGCGTAGGTTCAGGCGATTCGGTTCGGTTCGGTC
CGGTCCGGTTCGGTTCCCTGGCTGCCTTGATGACCTCGCCATTCCGACTC
TCTCGCGCCCGCCGTGATTTGGTGGGTAGATAGGGAGTTTTCACACTCGA
GCTGTATTTACATACTATTTCTAATATATCAAGTATTTATAGAATTATGC
TTCGTATAAATAGAAAGAGCCTAAATCTTGTCTATTATATCTTCTCTGGA
TGGTGGTTATAATAAGTAATAAGGGCCTACGTTTTATTATACTAGTTAAT
ATATCTTTCTCTTTATTACTACAATTACTATTACATTTAATACTGATTCA
TATATAGCTTAATCTGTCTGCTTAATCTTGTTGCCCCCTGCCTTTTTGTC
GGTCTGTCTTTTCTTTCTGTGTGTTTCGTCATCAGCTAGTTTTCAATCAC
GCGGCCATCAATTGCATCATCCGCGACGGCGGGAGTGACTTCAAGAACGG
GCAGGATGTAAAGGTCAACAGCCATTCGAACCTGGTAGATTTGGCGCTGC
CGGCGATGGGCTTGCTGAGGGCAGACGCCAGGGTTTGTGTGCCACGGGAA
GCGCCAGCGTTGGCATCGGGGGAGCCACTACGTCTTTTGCGGGCTCGCGC
GCTCGTGAGGTGGGAGGGTTGGGTGGAGGTGGTTTGGTGCATGTGGGGCG
CTCGTCAACATGACGGAGTGTGGAATGGGATATGATGCTACGGAACAGGG
GATGGAATGAGATGGAATTATGCTGTAGATGGATTTGAGAACTTCAACTA
TTAATAAATATACTGGATCAGATTCGATGAAATTAAAATAGAATTGACGT
AAAGTGGAATTGAAATCGGATTAATTTGTATTGAATGTGCTGGAATGGTA
TGAAACGGTTAACTGCCACCGCACCATGCACCGTTTTCCTCGCCTGATCC
TCGAAATGCGCGTGCATGGCGGCCCCCCGTCTCTCAAGGCCCTCTCGTCT
CTTTTAACGAATCTACTTGTTGAGCCACTGCCCCCTTTTACTCTCTAGTG
TTTTTAAGGCTCATTATTTTCACTCTGTTTCCTCCTTCGACCCGGCCGCG
TTGTAGAGCCGGTGGCGGGGTCGGGGTGGGTCTCCTGGTTCCTGCGGGCG
CGGCGGGTGCGATCGCCGACGAGCCGGGGGGCGAAAAGTGGGCGAGGACG
TCGGGGTTCGAGTGCGTCCAGCTGGTGCCTCCGAGGTGTGAGGCAACAGC
GACGATGTCTTGCCTTTCGCGACATTCTATTTCTTGGCATGGGTGTATTG
ATAGGATAGGATATAATATGATAGGATCGGATCGGATCGGATAGGTAAAT
TAGTGAATCAGCGAAATTGTCTCTCTCTTTAACGTTGTACAATGCGAAAA
TACAACCCCCAAGCAAACCAGGAGCGACAGGTGAAAAAAGGCAAGGGCTC
GCGTAGGAGGTAACGGTTGGAGTGGTCTAGTGGTTTAGCACGGGGCGCGG
GACGGTAGTCCTTTTAAGCTTTGCCGATATGTTCGGATGTGGGTGGGTGT
TGAAAGTATACCTTTAGAATAAGAGGCGTGTTCGTGTTCGTGTTCGTGTG
AGCCATCGACTCAAAGGAGTTTCACCCGTTTGTGGCTCCAGTTCCACCCT
CTCTTGTTCCCTTGCTGCCTCCTCCCCGTCGCGACCATTTCTTGGTGTTA
TTTCTTACTATTGAATCTTCGTTTTGAAAACTTGCATATTATGACTAAAC
GTTTTGAGTCTTGAAAATGTTTGACCGCGTAGATATTTTATGTTTCTAAA
TGTCTAAATGTTTAAGGTTCTGGAGTATGTAAAGTATTTGATCGGATTTA
TATTTTTATGTAGCTCTAGTATTAAAAGAAAAAAATGGCTTTCGCTCCCG
CAGGGCACGCGCACGCATCAGCATCGTCGAAACTCCTACCCTGCTTGTGG
GGCTGGTTGGTCGTCTCCTCGTCGAGGTTTCCGCTAGAGTCGACAGCGCG
GTCGCGAAGCCCGACACCTCTCGGGAGTCGCACGCCGGCAGCAAGGACAG
CGGCGACTGCGTCGGGTGCTACGGAAAGTCCCCGGACCCCTTCCGCGGTG
GGTTTCTTCACCTTGAGTGTGAACCGGCACCAGTCCCGCCGCCTATTGTG
GTGGAAATGGCACAGCCGGCAAATGTCACTCCCGCCTCTCTCTCCGCCTC
TGCACCCGCAGTCCCTTCTTTGCCGCCACTACCGCTGCCTGCAAGACCGC
GGCCGGAGCGGGCTTTCTTTTGGGAGCCTCGCTTTTCTGCCCGAGGAATT
CCTGGAGAAGTGGGCGGCGGGAACGTTAAGGAGGGGATGGAGGACATCTC
CGGAGGTGGTAGTGTCGGCGCGTCTGCAACAGTCGAGGGATTTATTCCGA
TCGTGGTCGGAAGCGACGGGCAGCCCGTCAGCGGCATCTCTCTTCCCTCA
TCACCGCCACTCTTCCGGCCGTCTCCATCTGAGAAAGAGGAGGGAGGAGG
GTTAACAAGAGTGGTCATAGTCCCCGTGTGGGTCCGATCGGAGACGGCCG
GAAGAGTGGCGGTGCGGGCGCGTGTTATTTACGGGCTGGAGGGGAGGCCG
TTAGCGGCGGCGACGGGTGAGCTCGGGGGAGGGCTGGCGTCAGCGACGTT
GGGGGAAGGCGTTTCGGCGACCGAGTGGGCGAGCGCGGAGGTGTTGTGCG
TCCGTCCGATCTCGGTGGCCGTAGACGTCGTCCCGCTTCAGGTGAGCCGC
TGCCGTGTTTTTCTGTGTAGAGAGCTTGAAGCTTAATTTAAAATTGTAGG
TACAGTATTTTATTTATTTTTGCCTTGCCCCCTGCATGTTCGAGAAAAAA
CGATGCCCTTATCAGCCGCCGGAATGTTCGACCGAACCGTGAATAGGGGT
CGAAAGCTCTATAAAGTATGTATACCCTTTCGTTCGTTCGTTGTTGTTGT
TGTTCTCTCAAGGTTGGGGATACACCGATATATGCGGGTCCGCCTGTGAT
CGTGCGCGTCTTTTTCTTGCCGAGTGATGGCCTCACACTTTCCCGTCTAG
TATTATGGTATTATGTATTGGGGGAGGGGGTGGTTCGCTCTCCCCACTGA
CCCATGCTTTTTTTTGTTTCTTTTTATACATTTTCGTCTTTTTTTTTACG
CACACTTATCAAATAAAAGGCGGGCCAATTCTGCCGGGAGATGCGTTCAC
GTCCTCTCGAGCGCTCTGGGCATGCCGTCGCCGTCAAGGTCAGGGAGCGT
TGTACAGAAATGAGCGCTTCAGGCTGAAGGAACACTTACAAATAGAGGAT
TCCGTCTTGAATAACTGAGCCTTACGGGAGGTTCTGTTTGATGTTGGCAC
TCGGACATGTACCGGTACACTCTATTAATACTTAAAAAACATATAAACTC
ATTCCAACCCTCCGAACATCCACACCTTCTTAGCGCCGTGAGAGAGGTAC
CATCCGGGGGACCAACTATCGTCGGGTTCGAATGTGTACATTACTACCTT
GAGTACAAAATCGTCACACGTGAGTATATATGTTTTTAAAGGTTATAGGT
CAGTGAAACACATGGTTGTATTATGCATATATATATATATATATATATAT
ATATATCTATTTATTTCGGACTGTATTACAGCTCGTGATAAATTGTGTTC
CGCAATAATGAGTTCATCGGGTGAACGGAATAGTGTCAGGTCTCAAGTGG
AATACGGTAGTAGACAAGTGGAATATGGTAGTAGACAAATGGAATATGGT
AATAGACAAGTGGAATACGGTGCTCGGGCCAAATACATGCTTCGGTCGAA
TATAATGTGTTCCCTCCCCTCCTACCCCCGAGAGCGTCCCCACATGACAT
CATGATCAATAATGAAAGTATACGGGATAATGACAGAGTCCCCGACATTA
AACCGTTGACCCGATTAAGGTACTATTGGGGATTACGAATAGTCACATAT
GTGACGATTTTCGTTTTCAAAGGTAGTTATGTACACATTCGAACCTAACG
TTAGTTGGTCCCCTGGATTGCACCTCTCACGATGCTAAGAAGGCGTGGAT
GTTCGGAGGGTTTGAAGGAGTTCATGTATAGATTCAATAAAAATGCTTGA
CGGATTTTTCAAAGACACCGACTCTTGCCCGCCCCCCTCCACCCCCTAGC
CCCTAGCCCCTAGCCCCTCATTATCTTCCCGCCACCAATCATATGACAAC
CCCGCTTCAACCCGCCGCTTTTCCCCGCTCACGGAATTATTTTCCCCCAC
TGAGAGGTATATTAATGTTTTGTAATTATCCCTCCCCCCGGCTGCCCGCC
CCCTGTTCAACTCTCTGCTTTGGCCCACGGTACCGTACCACCCCCATCCC
TCTCCCGCGACTCAAATGGTGCTTGGCTTGCTTGTAATTACCACACCACA
CAGGTGTCCGTCACCAACCTTCAGGAGAAGAGACTCGTCATCTCTCGCCT
GGAGATCGTCCCTCCCGAGAAGAACGATCCATCCTCCCTAGGGGGGAGCA
TTAGTAGCGGTGGCATCAGCGGTACCGGCGGCGGAATCACCCGCGTTGAC
GATGTCGTTGGAGTCGCGTGGGCGAACCTGCCGAACGGCCCGGTGTTGCA
CGATGCCACTATTAATAGCACTTCTGGTGGTGGTGGTGTGATAGTGCTGT
CGGGGCCCGGTGACAGCTACACGTGCTGCTTTAATGCTGTGGGGGACGCG
AGATACCCGGCCCCTCTGGGGAGACTACGGGTGACATGGAAACCCCAGCG
AATAGTACGGGAGGGAGGGGATCGGGGAATGGCGGCGACGGCGGCGATAG
CAACGACGGAGTTCCCGCTTCCGGTGCTGAGCGCGCGGCCGCCGGCGCTT
TCGGCGAGGCTGCGAGCGCCGCCGCATGCTCGAGTAGGGGTGGAGTTTTC
GCTGAGGTACAGTACAGTAGTCCACTTAGGTAATTTGGTGAGGTCCGTAC
ATTAACCAAATCTTAAGTACCGTGGATGATAGTGTGTAACGTGGAACACT
CTCCCCAATACCTCCCCAATTAGTTGGTGGTAGTTGTCCCCGCCTGGCTT
CCTTGCCTTGTACTTCAACTAATTGTGTTGTGCACACGAAGAGCAACAAC
AGATGCATCGGGATTTGAGTTTAGAAATATTTCGCTGTAAGCTTGTTTTT
AGATACCGGCCAAAATTGCGTTGCAACGCCTTCGGTGACTGGATGTACTG
CCGAGAAAATGAGCGGAAGACGGGAAGGGAGCCGCTATATCCCCGCAGGG
GGCGGGGGGTGGGGTTGTTCTAAATGTTTTCCCGTACATCGTAGAGCACG
TTCCGCAGTGCATCGTACCATACCATACCATACATCATACCACATTTTTA
CTAAAAAGGTGTACCATACATAGCGTACCATACTACATTGCCCCCCCCCC
CCTCACGACACCACTCCACCAAAAACATTGTACCCTACGGATTGTTCTGC
GCTGGATTATATTGGCGAGAGTGGTGTACAATGTGTGATATAGAGGAGCC
GGGCGGGGGGCGACTCTGCGTGCGTGCTGCGCACAAGAAGATTGTCGGGA
GGCATTTTTTTGTTATGTTCCCTATTACTGGTAGTTTGACGGTCGAGGGA
ATCTTGGAATCTTCCATCGTTATATCTAGGAAGGTAAGTCATACTACTCC
CTTTACTCCCTTCCCTTCCAGTCCGAGATAATTCTCCGCTATTGGTGGTA
CAGTAATATCACTATGAATACTATAGTACTATAGATGTTGCAGTAGGTTT
ATGTGTTCTCTTCCCCCGCCCGCCCGCCCGTCTCTTTTTACGCCGCCTTA
TTATATGAAACCCTCATGGTTTTCACGCGCCGCAAGCTGGGAAGTGTCAA
ATCCGACGACGGCGTACTCCACCATGCACCTCACGGCAGACGAAGGC
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Coding sequence (CDS) from alignment at H-elongata_contig16324:448..6544+

>mRNA_H-elongata_contig16324.4010.1 ID=mRNA_H-elongata_contig16324.4010.1|Name=mRNA_H-elongata_contig16324.4010.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4002bp|location=Sequence derived from alignment at H-elongata_contig16324:448..6544+ (Himanthalia elongata Himel1 dioecious)
CCCTTTACACAGACGCTTGATGTGGAGGTGGACGCGTCGCGCCTCGTGGC
GAAGGTGTCTGTAAGGTTTTCCGCTGCGGAGGCGTCGGCGGGGGATGTCC
TATTTCTCGGCGTGGCGCTGCTGTCGCTGCTGCCGGTGGACGTCCGCTTG
GAAAGCGTGGAGCCCTTTACACAGACGCTTGATGTGGAGGTGGACGCGTC
GCGCCTCGTGGCGAAGGTGTCTGTAAGGTTTTCCGCTGCGGAGGCGTCGG
CGGGGGATGTCCTATTTCTCGGCGTGGCGCTGCTGTCGCTGCTGCCGGTG
GACGTCCGCTTGGAAAGCGTGGAGCTAGTTTTCAATCACGCGGCCATCAA
TTGCATCATCCGCGACGGCGGGAGTGACTTCAAGAACGGGCAGGATGTAA
AGGTCAACAGCCATTCGAACCTGGTAGATTTGGCGCTGCCGGCGATGGGC
TTGCTGAGGGCAGACGCCAGGGTTTGTGTGCCACGGGAAGCGCCAGCGTT
GGCATCGGGGGAGCCACTACGTCTTTTGCGGGCTCGCGCGCTCGTGAGGT
GGGAGGGTTGGGTGGAGGTGGTTTGGTGCATCTAGTTTTCAATCACGCGG
CCATCAATTGCATCATCCGCGACGGCGGGAGTGACTTCAAGAACGGGCAG
GATGTAAAGGTCAACAGCCATTCGAACCTGGTAGATTTGGCGCTGCCGGC
GATGGGCTTGCTGAGGGCAGACGCCAGGGTTTGTGTGCCACGGGAAGCGC
CAGCGTTGGCATCGGGGGAGCCACTACGTCTTTTGCGGGCTCGCGCGCTC
GTGAGGTGGGAGGGTTGGGTGGAGGTGGTTTGGTGCATAGCCGGTGGCGG
GGTCGGGGTGGGTCTCCTGGTTCCTGCGGGCGCGGCGGGTGCGATCGCCG
ACGAGCCGGGGGGCGAAAAGTGGGCGAGGACGTCGGGGTTCGAGTGCGTC
CAGCTGGTGCCTCCGAGAGCCGGTGGCGGGGTCGGGGTGGGTCTCCTGGT
TCCTGCGGGCGCGGCGGGTGCGATCGCCGACGAGCCGGGGGGCGAAAAGT
GGGCGAGGACGTCGGGGTTCGAGTGCGTCCAGCTGGTGCCTCCGAGGGCA
CGCGCACGCATCAGCATCGTCGAAACTCCTACCCTGCTTGTGGGGCTGGT
TGGTCGTCTCCTCGTCGAGGTTTCCGCTAGAGTCGACAGCGCGGTCGCGA
AGCCCGACACCTCTCGGGAGTCGCACGCCGGCAGCAAGGACAGCGGCGAC
TGCGTCGGGTGCTACGGAAAGTCCCCGGACCCCTTCCGCGGTGGGTTTCT
TCACCTTGAGTGTGAACCGGCACCAGTCCCGCCGCCTATTGTGGTGGAAA
TGGCACAGCCGGCAAATGTCACTCCCGCCTCTCTCTCCGCCTCTGCACCC
GCAGTCCCTTCTTTGCCGCCACTACCGCTGCCTGCAAGACCGCGGCCGGA
GCGGGCTTTCTTTTGGGAGCCTCGCTTTTCTGCCCGAGGAATTCCTGGAG
AAGGCACGCGCACGCATCAGCATCGTCGAAACTCCTACCCTGCTTGTGGG
GCTGGTTGGTCGTCTCCTCGTCGAGGTTTCCGCTAGAGTCGACAGCGCGG
TCGCGAAGCCCGACACCTCTCGGGAGTCGCACGCCGGCAGCAAGGACAGC
GGCGACTGCGTCGGGTGCTACGGAAAGTCCCCGGACCCCTTCCGCGGTGG
GTTTCTTCACCTTGAGTGTGAACCGGCACCAGTCCCGCCGCCTATTGTGG
TGGAAATGGCACAGCCGGCAAATGTCACTCCCGCCTCTCTCTCCGCCTCT
GCACCCGCAGTCCCTTCTTTGCCGCCACTACCGCTGCCTGCAAGACCGCG
GCCGGAGCGGGCTTTCTTTTGGGAGCCTCGCTTTTCTGCCCGAGGAATTC
CTGGAGAAGACATCTCCGGAGGTGGTAGTGTCGGCGCGTCTGCAACAGTC
GAGGGATTTATTCCGATCGTGGTCGGAAGCGACGGGCAGCCCGTCAGCGG
CATCTCTCTTCCCTCATCACCGCCACTCTTCCGGCCGTCTCCATCTGAGA
AAGAGGAGGGAGGAGGGTTAACAAGAGTGGTCATAGTCCCCGTGTGGGTC
CGATCGGAGACGGCCGGAAGAGTGGCGGTGCGGGCGCGTGTTATTTACGG
GCTGGAGGGGAGGCCGTTAGCGGCGGCGACGGGTGAGCTCGGGGGAGGGC
TGGCGTCAGCGACGTTGGGGGAAGGCGTTTCGGCGACCGAGTGGGCGAGC
GCGGAGGTGTTGTGCGTCCGTCCGATCTCGGTGGCCGTAGACGTCGTCCC
GCTTCAGGTGAGCCGCTGCCGTGACATCTCCGGAGGTGGTAGTGTCGGCG
CGTCTGCAACAGTCGAGGGATTTATTCCGATCGTGGTCGGAAGCGACGGG
CAGCCCGTCAGCGGCATCTCTCTTCCCTCATCACCGCCACTCTTCCGGCC
GTCTCCATCTGAGAAAGAGGAGGGAGGAGGGTTAACAAGAGTGGTCATAG
TCCCCGTGTGGGTCCGATCGGAGACGGCCGGAAGAGTGGCGGTGCGGGCG
CGTGTTATTTACGGGCTGGAGGGGAGGCCGTTAGCGGCGGCGACGGGTGA
GCTCGGGGGAGGGCTGGCGTCAGCGACGTTGGGGGAAGGCGTTTCGGCGA
CCGAGTGGGCGAGCGCGGAGGTGTTGTGCGTCCGTCCGATCTCGGTGGCC
GTAGACGTCGTCCCGCTTCAGGTGAGCCGCTGCCGTGCGGGCCAATTCTG
CCGGGAGATGCGTTCACGTCCTCTCGAGCGCTCTGGGCATGCCGTCGCCG
TCAAGGCGGGCCAATTCTGCCGGGAGATGCGTTCACGTCCTCTCGAGCGC
TCTGGGCATGCCGTCGCCGTCAAGGTGTCCGTCACCAACCTTCAGGAGAA
GAGACTCGTCATCTCTCGCCTGGAGATCGTCCCTCCCGAGAAGAACGATC
CATCCTCCCTAGGGGGGAGCATTAGTAGCGGTGGCATCAGCGGTACCGGC
GGCGGAATCACCCGCGTTGACGATGTCGTTGGAGTCGCGTGGGCGAACCT
GCCGAACGGCCCGGTGTTGCACGATGCCACTATTAATAGCACTTCTGGTG
GTGGTGGTGTGATAGTGCTGTCGGGGCCCGGTGACAGCTACACGTGCTGC
TTTAATGCTGTGGGGGACGCGAGATACCCGGCCCCTCTGGGGAGACTACG
GGTGACATGGAAACCCCAGCGAATAGTACGGGAGGGAGGGGATCGGGGAA
TGGCGGCGACGGCGGCGATAGCAACGACGGAGTTCCCGCTTCCGGTGCTG
AGCGCGCGGCCGCCGGCGCTTTCGGCGAGGCTGCGAGCGCCGCCGCATGC
TCGAGTAGGGGTGGAGTTTTCGCTGAGGTGTCCGTCACCAACCTTCAGGA
GAAGAGACTCGTCATCTCTCGCCTGGAGATCGTCCCTCCCGAGAAGAACG
ATCCATCCTCCCTAGGGGGGAGCATTAGTAGCGGTGGCATCAGCGGTACC
GGCGGCGGAATCACCCGCGTTGACGATGTCGTTGGAGTCGCGTGGGCGAA
CCTGCCGAACGGCCCGGTGTTGCACGATGCCACTATTAATAGCACTTCTG
GTGGTGGTGGTGTGATAGTGCTGTCGGGGCCCGGTGACAGCTACACGTGC
TGCTTTAATGCTGTGGGGGACGCGAGATACCCGGCCCCTCTGGGGAGACT
ACGGGTGACATGGAAACCCCAGCGAATAGTACGGGAGGGAGGGGATCGGG
GAATGGCGGCGACGGCGGCGATAGCAACGACGGAGTTCCCGCTTCCGGTG
CTGAGCGCGCGGCCGCCGGCGCTTTCGGCGAGGCTGCGAGCGCCGCCGCA
TGCTCGAGTAGGGGTGGAGTTTTCGCTGAGCTGGGAAGTGTCAAATCCGA
CGACGGCGTACTCCACCATGCACCTCACGGCAGACGAAGGCCTGGGAAGT
GTCAAATCCGACGACGGCGTACTCCACCATGCACCTCACGGCAGACGAAG
GC
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