mRNA_H-elongata_contig16306.4004.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: D8LJU6_ECTSI (Yellow cameleon 2.60 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJU6_ECTSI) HSP 1 Score: 233 bits (594), Expect = 1.400e-76 Identity = 126/144 (87.50%), Postives = 136/144 (94.44%), Query Frame = 1
Query: 4 AVRSTKDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
A ++TK+L++EE+EDYKEAFSNFDKDGNGNIDE ELGVVMRSLGYSPT QQLK+MMAKVD D SGGISFDEFV MMQLGEVETDF KEINEAFKFFDKDGDGEVTP+ELAEIMRGLGDKLSD+EIELLVKVAXXXXXX ISI+E
Sbjct: 4 AAKTTKELSEEEIEDYKEAFSNFDKDGNGNIDELELGVVMRSLGYSPTNQQLKEMMAKVDTDQSGGISFDEFVAMMQLGEVETDFTKEINEAFKFFDKDGDGEVTPAELAEIMRGLGDKLSDDEIELLVKVAXXXXXXVISIDE 147
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A0A6H5JMF0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF0_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.460e-67 Identity = 115/144 (79.86%), Postives = 131/144 (90.97%), Query Frame = 1
Query: 4 AVRSTKDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
A +TK+L++EE+EDYKEAFSNFDKD +GNIDE ELGVVMRSLGYSPT +QLK++MAKVD D +GGISF+EFV MMQLGEVETDF KEINEAFKFFDKDGDGEVT +ELAEIMRGLGD L+D+EI+LLVKV XXXXXX ISI+E
Sbjct: 67 AATTTKELSEEEIEDYKEAFSNFDKDCSGNIDESELGVVMRSLGYSPTNEQLKEIMAKVDTDGNGGISFEEFVAMMQLGEVETDFKKEINEAFKFFDKDGDGEVTRAELAEIMRGLGDTLTDDEIDLLVKVXXXXXXXVISIDE 210
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A0A835YUT0_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT0_9STRA) HSP 1 Score: 164 bits (415), Expect = 2.530e-49 Identity = 83/125 (66.40%), Postives = 100/125 (80.00%), Query Frame = 1
Query: 19 KDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVK 393
++ T+EE+EDY+EAF+NFDKD +G IDE ELG VMRSLGY+PT +QL DMM KVD+D +G ISFDEFV MM+ EVETDF +EI EAFK FDKDG G + EL IM+GLG LSD+EIELLV+
Sbjct: 10 REATEEELEDYREAFNNFDKDQSGEIDEYELGTVMRSLGYNPTDEQLHDMMLKVDIDGNGSISFDEFVIMMRKCEVETDFDREITEAFKVFDKDGSGSIDKEELTAIMKGLGANLSDQEIELLVR 134
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: D7G0X3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0X3_ECTSI) HSP 1 Score: 158 bits (399), Expect = 9.010e-47 Identity = 81/137 (59.12%), Postives = 103/137 (75.18%), Query Frame = 1
Query: 25 LTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
L++E++ D KEAF NFD++G+G ID EL V+RSLGYSPTK QLK +M KVDLD +G ISF+EFV +M++G +ETD+ KEIN AF FFDK+GDG+V ELAEI R LGD L+D EI LL+ A TIS++E
Sbjct: 15 LSEEDVADLKEAFDNFDRNGDGTIDSVELATVLRSLGYSPTKDQLKKLMDKVDLDGTGDISFEEFVVLMRVGGMETDYEKEINGAFSFFDKNGDGQVDRQELAEIARALGDSLTDAEIYLLINAAHKDRDATISMKE 151
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A0A835YVF8_9STRA (Yellow cameleon 2.60 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF8_9STRA) HSP 1 Score: 155 bits (391), Expect = 9.890e-46 Identity = 81/137 (59.12%), Postives = 99/137 (72.26%), Query Frame = 1
Query: 25 LTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
LT+EE+EDY+EAF NFDKDGNG ID ELG+VMRSLGYSPT +QL+DM+ + +F+EFV MM+ E+ TDF EI AF+FFDKDGDG++T ELA +MRGLG LSD+EI LLVK A IS+ E
Sbjct: 8 LTKEEVEDYEEAFKNFDKDGNGEIDLKELGIVMRSLGYSPTDKQLRDMLKQAXXXXXXXXTFNEFVEMMRRCELSTDFEMEIKGAFEFFDKDGDGDITSEELASVMRGLGANLSDQEIALLVKEADKNGDGAISLHE 144
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: D8LH46_ECTSI (Calmodulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH46_ECTSI) HSP 1 Score: 152 bits (385), Expect = 9.120e-45 Identity = 83/139 (59.71%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 19 KDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
KDLT EE+ED KE F FDKDG+G ID EL VM SLGYSPT +QL+DMMAKVDLD +G I+F EFVTMM+ +V+TDF ++I EAFKFFD+DG G + EL IMR LG KL+D EI LLV+ A + I E
Sbjct: 10 KDLTGEEVEDLKETFRTFDKDGSGEIDLDELRTVMTSLGYSPTNKQLEDMMAKVDLDGNGLINFAEFVTMMRKCKVDTDFDRQIREAFKFFDQDGSGAIDTKELGNIMRQLGAKLTDSEINLLVQEADVDGDGQVDINE 148
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A0A835Z1Q3_9STRA (Calmodulin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Q3_9STRA) HSP 1 Score: 134 bits (338), Expect = 8.840e-38 Identity = 75/144 (52.08%), Postives = 96/144 (66.67%), Query Frame = 1
Query: 4 AVRSTKDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
A ++LTQEE++DYKEAF NFDKDGNG IDE EL VMRSLGY+PT +QL DMM +DLD + EFVTMM+ EVETDF +E+ EAF+ FD+DG G + +EL IM+ +IELLV+ A I+++E
Sbjct: 6 ASSEMRELTQEELDDYKEAFDNFDKDGNGEIDEIELSTVMRSLGYNPTDEQLHDMMLNIDLDGN------EFVTMMRKCEVETDFDREVREAFQVFDRDGSGAIDKAELTVIMKA--------KIELLVREADVDGDGAINLDE 135
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A7SRU7_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SRU7_NEMVE) HSP 1 Score: 129 bits (323), Expect = 2.170e-35 Identity = 69/138 (50.00%), Postives = 102/138 (73.91%), Query Frame = 1
Query: 22 DLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
DLT+EE+ +YKEAFS FDKDG+G + ELG VMR+LG +PT +++++M+ +VD D SG I F+EF+ +M + E+ AF+ FDKDG+G +T +EL E++ LG+KLS++E+ ++K AXXXXXXT++IEE
Sbjct: 4 DLTEEEIAEYKEAFSLFDKDGDGTVTTAELGTVMRNLGQNPTDEEIREMIKEVDEDGSGSIGFEEFLQLMSKKTKGKSYEDELMAAFQIFDKDGNGSITVTELKEVLDSLGEKLSEDEVGEMIKEAXXXXXXTVNIEE 141
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: A0A6J8AQJ0_MYTCO (Calmodulin n=2 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8AQJ0_MYTCO) HSP 1 Score: 129 bits (323), Expect = 2.300e-35 Identity = 63/125 (50.40%), Postives = 92/125 (73.60%), Query Frame = 1
Query: 25 LTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVA 399
+ +E++ ++KEAFS FDKDG+G I ELGVVMRSLG +P+ Q+L+D++ +VD+D +G I F EF+TMM +TD +EI EAF+ FDKDG G ++ ++L IM LGDKL DEE++ +++ A
Sbjct: 11 IPEEQLREFKEAFSLFDKDGDGTISSAELGVVMRSLGQNPSDQELQDLINEVDIDGNGIIDFQEFLTMMAKKMKDTDTEEEIREAFRVFDKDGSGSISANDLRHIMTNLGDKLPDEEVDEMIQEA 135
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Match: B3LYL1_DROAN (Uncharacterized protein n=2 Tax=ananassae subgroup TaxID=32347 RepID=B3LYL1_DROAN) HSP 1 Score: 128 bits (322), Expect = 2.650e-35 Identity = 66/138 (47.83%), Postives = 97/138 (70.29%), Query Frame = 1
Query: 22 DLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKQQLKDMMAKVDLDNSGGISFDEFVTMMQLGEVETDFAKEINEAFKFFDKDGDGEVTPSELAEIMRGLGDKLSDEEIELLVKVAXXXXXXTISIEE 435
DLT+E++ ++KEAF FDKDG G I ELG VMR+LG +PT+ +L+DM+A++D D +G I F+EF +MM ETD +E+ EAFK FD+D DG ++P+EL +M LG+K++DEEI+ +++ A I+ EE
Sbjct: 3 DLTEEQVAEFKEAFIQFDKDGTGKISTRELGAVMRALGQNPTESELQDMIAEIDNDPNGQIDFNEFCSMMAKQMRETDTEEEMREAFKIFDRDCDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEE 140 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16306.4004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16306.4004.1 >prot_H-elongata_contig16306.4004.1 ID=prot_H-elongata_contig16306.4004.1|Name=mRNA_H-elongata_contig16306.4004.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=146bp MAVRSTKDLTQEEMEDYKEAFSNFDKDGNGNIDEGELGVVMRSLGYSPTKback to top mRNA from alignment at H-elongata_contig16306:2916..4512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16306.4004.1 ID=mRNA_H-elongata_contig16306.4004.1|Name=mRNA_H-elongata_contig16306.4004.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1597bp|location=Sequence derived from alignment at H-elongata_contig16306:2916..4512- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16306:2916..4512- >mRNA_H-elongata_contig16306.4004.1 ID=mRNA_H-elongata_contig16306.4004.1|Name=mRNA_H-elongata_contig16306.4004.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=876bp|location=Sequence derived from alignment at H-elongata_contig16306:2916..4512- (Himanthalia elongata Himel1 dioecious)back to top |