mRNA_H-elongata_contig16304.4001.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16304.4001.1
Unique NamemRNA_H-elongata_contig16304.4001.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16304.4001.1 vs. uniprot
Match: D8LM09_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM09_ECTSI)

HSP 1 Score: 378 bits (971), Expect = 1.960e-125
Identity = 213/313 (68.05%), Postives = 242/313 (77.32%), Query Frame = 1 
Query:   28 MRSWVVVVFFLTNLVESFHVNTFNRQIIFRRTRLAAHPSARA--ISMGTSSLPTLESLRKTGLMTIAALVIGSSPL-----HAFAASIPAVAEELTAENPATVQELSPAEMLVKKTTEIQRKRLKEEEQQQLQGDVDMAEGDLIARVRVSIKADLYELGAPDVSGFPGLDTDDARLIVAAFGKDGPPVAAKRLTIKGRPFPVIVELTVNDLAFPLTKDAWKQDGRSLEDIGLAVEIDPDGKAATLDSGSLTGYGVSKPLRIGAQMERTEATIELIPNPQLQERAEQTLPPEGLEQLERVDAMLDYKEEQASKG 945
            MRS+ V  FFL ++VESFHV+T  R   F  +R ++   A    + MG  SLP+ ESLRKT   T AAL+I  SP      HAFAA            + A  QELSPAEMLVKKTT++QRKRLK+E Q+QLQGDV M EGDLIARV VSIK DLY+LGAPD +GFP +DTDDARLIVAAFGKDGPPVAAKRL +KGR FPV VELT +DLAFPLTKDAW+ D RS EDIGLAVEIDPDG+AATLDS SLTGYGVSKPLRIGAQ+ERTEA +EL+ NPQL+ERAEQ LP EG++QLERVDAMLDYKE +A KG
Sbjct:    1 MRSYAVAAFFLASVVESFHVSTVGRPHEFHSSRSSSRAGASVSPLLMGAPSLPSAESLRKTAASTAAALLIAFSPAVASYQHAFAA------------DRAGAQELSPAEMLVKKTTDMQRKRLKDESQKQLQGDVTMQEGDLIARVLVSIKQDLYDLGAPDTTGFPAVDTDDARLIVAAFGKDGPPVAAKRLAVKGRQFPVTVELTADDLAFPLTKDAWRLDSRSKEDIGLAVEIDPDGRAATLDSESLTGYGVSKPLRIGAQLERTEAAVELVANPQLKERAEQALPNEGIQQLERVDAMLDYKEAKAPKG 301
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BLAST of mRNA_H-elongata_contig16304.4001.1 vs. uniprot
Match: A0A836CAJ8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAJ8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 7.910e-63
Identity = 125/282 (44.33%), Postives = 178/282 (63.12%), Query Frame = 1 
Query:  199 KTGLMTIAALVIGSSPLHAF--------------AASIPAVAEELTAENPATVQELSPAEMLVKKTTEIQRKRLKEEEQQQLQGDVDMAEGDLIARVRVSIKADLYELGAPDVSGFPGLDTDDARLIVAAFGKDGPPVAAKRLTIKGRPFPVIVELTVNDLAFPLTKDAWKQDGRSLEDIGLAVEIDPDGKAATLDSGSLTGYGVSKPLRIGAQMERTEATIELIPNPQLQERAEQTLPPEGLEQLERVDAMLDYKEEQASKGIAAA*FSGACCAHDFCWSW 1002
            K     IAALV+ +SP+ A               +  I  V E+  A+    V++++P + L ++ T  Q  R++ E+Q+ L+ D     G+LIARV VSIK+D + LG PDV  FP LDT+DARLIV AFG+ GPPVA++R+ +KG  FP ++ELT +DLAFPLTK+ W  D R+ ++IG+AV +D DGK ATLD+G LTGYG+SKP+++G Q++RTEA + +  N  L+E+ +  LP   +  LER+DA+LD KE  A+   AA     A  A+   W W
Sbjct:   43 KAACSAIAALVVAASPVLAIGDVPPVLQEGGSSESGGIAIVQEQQLAQQQQPVEDINPVQQLAQQATAEQVTRVRAEQQEVLRRDALREPGELIARVVVSIKSDAFPLGFPDVGPFPELDTEDARLIVTAFGRSGPPVASRRVPLKGLKFPALLELTADDLAFPLTKEVWLNDARAQDEIGVAVVLDVDGKLATLDAGDLTGYGISKPIKLGGQVQRTEAIVTVQVNKALEEKGQAALPSMEIAVLERIDALLDLKESIAATAAAAP----AAPANTIQWGW 320
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BLAST of mRNA_H-elongata_contig16304.4001.1 vs. uniprot
Match: A0A4D9DAT9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAT9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.720e-21
Identity = 48/127 (37.80%), Postives = 80/127 (62.99%), Query Frame = 1 
Query:  487 PDVSGFP-----------GLDTDDARLIVAAFGKDGPPVAAKRLTIKGRPFPVIVELTVNDLAFPLTKDAWKQDGRSLEDIGLAVEIDPDGKAATLDSGSLTGYGVSKPLRIGAQMERTEATIELIP 834
            P++ G+P            L+ D+A L++  +G++G PVAAK++ ++G  FP   ELT N+L FPLTK+ W++D R+ +D+G++  +D DGK +T +   L G+G+SKP+ I     R +A I++ P
Sbjct:  157 PEIEGYPLGPERPGVINYALENDNAALLITCYGREGGPVAAKKIQLRGLQFPYNFELTFNNLLFPLTKETWEKDNRAFDDLGISALLDLDGKFSTANENDLLGFGISKPVAIAGSQIRRDALIQVTP 283
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16304.4001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LM09_ECTSI1.960e-12568.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAJ8_9STRA7.910e-6344.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9DAT9_9STRA1.720e-2137.80Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16304contigH-elongata_contig16304:127..5304 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-14_002410.1
Exons7
Model size1602
Cds size933
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929954.604014-UTR-H-elongata_contig16304:126..1531622929954.604014-UTR-H-elongata_contig16304:126..153Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16304 127..153 +
1691679222.0669537-UTR-H-elongata_contig16304:126..1531691679222.0669537-UTR-H-elongata_contig16304:126..153Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16304 127..153 +
1622929954.7360823-UTR-H-elongata_contig16304:4662..53041622929954.7360823-UTR-H-elongata_contig16304:4662..5304Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16304 4663..5304 +
1691679222.1432343-UTR-H-elongata_contig16304:4662..53041691679222.1432343-UTR-H-elongata_contig16304:4662..5304Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16304 4663..5304 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929954.6216028-CDS-H-elongata_contig16304:153..2451622929954.6216028-CDS-H-elongata_contig16304:153..245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 154..245 +
1691679222.0775099-CDS-H-elongata_contig16304:153..2451691679222.0775099-CDS-H-elongata_contig16304:153..245Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 154..245 +
1622929954.6380937-CDS-H-elongata_contig16304:518..7651622929954.6380937-CDS-H-elongata_contig16304:518..765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 519..765 +
1691679222.0882437-CDS-H-elongata_contig16304:518..7651691679222.0882437-CDS-H-elongata_contig16304:518..765Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 519..765 +
1622929954.6522636-CDS-H-elongata_contig16304:1990..20681622929954.6522636-CDS-H-elongata_contig16304:1990..2068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 1991..2068 +
1691679222.0976214-CDS-H-elongata_contig16304:1990..20681691679222.0976214-CDS-H-elongata_contig16304:1990..2068Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 1991..2068 +
1622929954.6695125-CDS-H-elongata_contig16304:2456..26691622929954.6695125-CDS-H-elongata_contig16304:2456..2669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 2457..2669 +
1691679222.1060483-CDS-H-elongata_contig16304:2456..26691691679222.1060483-CDS-H-elongata_contig16304:2456..2669Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 2457..2669 +
1622929954.6853569-CDS-H-elongata_contig16304:2873..30141622929954.6853569-CDS-H-elongata_contig16304:2873..3014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 2874..3014 +
1691679222.1147175-CDS-H-elongata_contig16304:2873..30141691679222.1147175-CDS-H-elongata_contig16304:2873..3014Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 2874..3014 +
1622929954.700307-CDS-H-elongata_contig16304:4139..42571622929954.700307-CDS-H-elongata_contig16304:4139..4257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 4140..4257 +
1691679222.1257813-CDS-H-elongata_contig16304:4139..42571691679222.1257813-CDS-H-elongata_contig16304:4139..4257Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 4140..4257 +
1622929954.7192347-CDS-H-elongata_contig16304:4618..46621622929954.7192347-CDS-H-elongata_contig16304:4618..4662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 4619..4662 +
1691679222.1344457-CDS-H-elongata_contig16304:4618..46621691679222.1344457-CDS-H-elongata_contig16304:4618..4662Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16304 4619..4662 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16304.4001.1prot_H-elongata_contig16304.4001.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16304 154..4662 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16304.4001.1

>prot_H-elongata_contig16304.4001.1 ID=prot_H-elongata_contig16304.4001.1|Name=mRNA_H-elongata_contig16304.4001.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=311bp
MRSWVVVVFFLTNLVESFHVNTFNRQIIFRRTRLAAHPSARAISMGTSSL
PTLESLRKTGLMTIAALVIGSSPLHAFAASIPAVAEELTAENPATVQELS
PAEMLVKKTTEIQRKRLKEEEQQQLQGDVDMAEGDLIARVRVSIKADLYE
LGAPDVSGFPGLDTDDARLIVAAFGKDGPPVAAKRLTIKGRPFPVIVELT
VNDLAFPLTKDAWKQDGRSLEDIGLAVEIDPDGKAATLDSGSLTGYGVSK
PLRIGAQMERTEATIELIPNPQLQERAEQTLPPEGLEQLERVDAMLDYKE
EQASKGIAAA*
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mRNA from alignment at H-elongata_contig16304:127..5304+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16304.4001.1 ID=mRNA_H-elongata_contig16304.4001.1|Name=mRNA_H-elongata_contig16304.4001.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5178bp|location=Sequence derived from alignment at H-elongata_contig16304:127..5304+ (Himanthalia elongata Himel1 dioecious)
CTACAATGTCGTAGCACTTCGTTAAGCATGCGTTCTTGGGTCGTGGTTGT
GTTCTTCTTGACGAACTTGGTCGAGTCATTCCATGTCAACACCTTCAATA
GACAGATTATCTTCCGCAGGTGAGACGCCAAGATTTTTCATCGAGATTAA
ATATGAACCCCCCACGTGGCGCCAAGAGCTCGCCGTTTGGCATCGCCAGC
GAATTGATGCTGCGTGGTCGACACATGCTAGACTGTTGCACCTACATTTC
TTGTCAAAGCACCGTCGATTCCGCACCAGCTGAACTGTGCTGCGGCTTAC
TTGAGCACTAGGCTCAATAAATTGTACTCTTTCGATCGGTACTTGAGATG
ACTCTCACCTAGCAACCTCGCCCCGCCTCGTGTGAAACCCAGGACGCGGT
TGGCTGCGCACCCCTCTGCCAGAGCTATATCCATGGGTACATCGTCCTTG
CCCACCTTGGAAAGCTTACGGAAAACTGGATTGATGACCATTGCCGCGTT
AGTGATCGGAAGCTCTCCCCTTCACGCTTTCGCAGCTTCGATTCCGGCCG
TGGCGGAGGAGCTCACAGCTGAAAACCCAGCTACGGTTCAGGAGCTCTCG
CCCGCCGAGATGCTTGTGAAGAAGACTACCGAGATACAGGTGCCGACTCT
TGTTGAAAATAACACCCAAAATCAGTTATAAATGACAGAGGGCACGCGCG
ACACATCTTGGCGCGGCTCATACTGTAGTTGAACCAGAGCCAGCAGCATC
GCTGACATAACTTCTGCGCATTCTACCGTGTCCGATAAGAGTAGCAACCT
CATCTAGATTGGGGGTGTGCGATGCGCAGCGCCCAGGAGCGTAAGCTGCA
TTCAGTGGATTTTTCTGGTACAGGCATCCTGCGGAGCGTAAACTGCAGGG
GAAAATCCGGAGGTGATGTTCATGCTTCCCCACAGGAACCGTTCAAACGC
GTCACACAACGAACCGTTTTTTTCTCGCACGCAGTGGTCCTCGGTAGCGG
TAGTGACAGCCGGCACATCTTCTTTGTTGCTGGGGCAACCGCGTGTTATT
TATTTATTTATTTCATTCCTCACATTAGCTCTTTTCCGAAAACTCTAGAG
CCCGTGGTCACAAAAGTGTTGGAGTCTAGGAAGGTAAAAATAACACACGA
AAAGTAGAAAAGGGGAAGGGGCACACAAGGCCGAAAGAGGTACACCTAAT
TTACTACTAAGTTGGTGTGTGTTCAACCTGAACAACACATTCACGGTATA
TATCATGATCCCCAACCAAATAAATTGTTGTTGACTACAGCAGAGTTGCT
GTCTGGAGTGCTGCCCGCACCGTACAAAAAACGTATTATAGTCGAGGGAA
ATGAATGAGCGCAGCTACTGTCTGAAGCGCTGTCAAACTGACGACCAGTG
GACACGCAGTGAAAAAGGAACAACCAACAATAGCCACCAGAGTCAACAAT
CACGAAGTATTTTCTCGAACCGTCTGTGGTAGGCACAGCGCGAATAGTTG
TGCCTTACAGACGCAGTTCAGCCCGGTGTGGTTTTCAATGCCAACTTTTT
TGTAAGGACCTCTTCGGGTGTTGGCAACGACTCTCTCTTCGAAGCCTTTC
ATACGAGCTGTCCTGCTGCTGGACCTAACTGATATGCATATTAATATGTA
TTGTCAGCAATACATGAGATGCCTGCAGAGACTGTTCCTAAAGCTTCACC
CTCATTATTGATTGCCTGGCTCACGGCGGACACCTCCCTGTGGCATGCGT
ACGGTGTAGTGCTGTGGCCCCTCACGTCCTGCCTGAGTGTCCCGAGATTG
TGACGATTATTTTATCGTGATGGATGTTGTACCGGGTTGGTTTTTCGTGA
CTGTGGACGCACAGCGGAAAAGACTCAAGGAGGAGGAGCAGCAACAGCTC
CAAGGGGATGTCGACATGGCAGAAGGGGATCTAATTGCCAGGGTGAGATG
ACGACTGGAAGACGAGAGCGCTTCTCCTTTTCTCGCTAGCGTATCTTGAG
ACGCCTGGTAAACCACGATAAAAAAGCGCGCGTCTTCGCTGGGTCTCCTG
TAAACGTTAGAAGCCGTCTCGCCGTATACACCGGCGGTCGTCGGGTGTTC
AGATGCTTGTGTGTTCTTAAATAGTGTTCCGTACATTGCGAACACATGCT
TCGAGACTGTAGTTTGTTAGTGCTCCTCCAAACCCTGCGAGCGTTCGTAC
CACACACACTGATGAATGAAAATGATGCTGGTGAAGCAATAACCCAGGCT
CCACCTCCTCAGGAGATACACGCGCTAGGTGCTTAAAGCTCGTATATGTC
GCGTGCCCGTTGTCGACCCGTCTTTCTCAGGTGCGAGTATCGATCAAAGC
TGACCTCTACGAACTGGGGGCTCCAGACGTCTCCGGTTTCCCGGGCTTAG
ACACCGATGACGCACGGCTTATCGTAGCGGCGTTCGGGAAGGATGGCCCA
CCGGTCGCCGCCAAGCGGCTCACCATCAAGGGGCGACCATTCCCCGTGAT
CGTTGAGCTAACAGTGAACGACCTGGCGTTTCCACTGACAAAGGCGAGAC
TGCTTATCCTACTACCGTCTAACATATCTGCTTCGTTCTGACGATACATG
TCCGGGAAAGTTTGCTTCGCCAGATTCGAGTTGGCGCGATACTGTGTTAA
AAGCCTCGCCAGTATTATATCTCCAGGATTATAGTCAGCGTGCCCGAGTC
GTGCGACTTTGGCAGTAAAGCATCTTTTTGTGTGTCTTTATGTGCAGGAT
GCGTGGAAGCAAGACGGTCGCTCGTTGGAGGACATCGGGCTGGCTGTCGA
GATAGACCCCGATGGAAAAGCGGCGACGCTCGACTCGGGGAGCCTGACGG
GGTACGGAGTCAGCAAGCCACTGCGCATTGGGGCACAGGTGAGGTATACG
GACTATTATGTGTACTCTGAGCGTACCTTTCCTGGTGTGACTCGGAAATC
ACCCAGGGCGTGTGCGCTATAAAGTTGGGTGTAATCTTCCGTACGCCCGT
CATTGAGGGGGCGGGGAGTACACTGCTCTCGCTATTTATAGTATTTCCGC
GTTCCAGTTTAATGATCTGCTTTCTTGACCGTCGTGTGCATTTTATATGG
TCGATACGTGATACTTGACGAAGGGAGGATCCCGTGCTGCTTGACACGTA
AAACAGTACAGTTTCAATCGAACAGGAACATTCATACTCCCAAGTTAAAT
ATATATTTTTTTAGGTGAACAGATGGTAACATGTGAAACCAGCCGTACTG
TACTTTTCACTAATGAAGCCCCTGCCTTGTATAGCAGCCCATGGGGGGGG
GGGGTTGTGAAGAACATGCTGTATCCCGACGAATATCGGCCACGCATACC
AGGTTTTCTTCGCCCAGGCTGCGTTTCCAAATATTACACCATATTTTACC
TTGCGTTTACTACGCCAAACCGAACATGGCATGGGTAAGGTTGACCACCG
GGTTACCAAATCTGCACATTCAGCGGGCACGGCTATAGTTCAATTACCCC
AGAAGGGTTTTGATTTCCGCGCGAACGCATAAGCGCAGCACGCACACCAT
ATATCCAACGGTCTATGTGTGATACCCTTCTGTCAAGAGTACGCTCACAA
GTCTCTGGTTGCTCTATGAGGGCTTTCCAGCAATCCATTCGTGATTCGTT
TCATCCCTTTGGGGTGAAGTAAGACTCTTCGACCGTGGTCTCTGAGCTCA
TGGGACACACTGCATGAGCCCCCCATGCCAGGGTGATACTACGTACTTTA
GTCGTCACCTACCGTAGTAAGACCTGAGGGTGACTCCGCCTCGCGGGATG
ATTGCGCGTATATCTATATGCATGTATTCGCGACAGCGCGGCTATTTATG
TTGCTTGTACAGAATCATATAGGTGTCACATAGTTTCTTCCTACATCCCC
TCACCCGCACGTATATCACCGCGGCAAAAAATATGTTGCTCTCTCGCCTT
CCCCTTGTGTCCAGCGGCGGGAGCCTCCACTCATCACGTTTGATTTATCT
ACGTCGCCTGCAGATGGAACGCACGGAGGCCACGATAGAGCTGATACCCA
ACCCGCAACTACAGGAGAGGGCTGAGCAGACCCTGCCCCCGGAAGGACTG
GAGCAACTGGAGCGCGTCGATGCTATGTTGGGTGAGAGTCGACGCCTCGC
ATAACGTCGTGGGGTCCGTGTTGTTGGGAGTTGAGAGTCGTGCTGTGTTT
TTTTGGATGATCTGTCCCGAACGATTCTTAGCCAGAGCAGCCTCTGTTTA
TATATATATATATATATATTTGGTCACCATCAGGAGTTGGATTTTGCTCC
ACACAAGCGGTCGACCTTTACCGGGTACACGCAGCTTTCCTTGAATTCGA
TGCCGACTAGCTACCTCGTTATCTTATATAATCAATATGTTGTTGACGTT
GATTTTATTTACTATACCACCCTCGACTGGCCTGTTGCGCGTTTGGGATC
TCGACGAAACGCGAACAAATCATCTTCCCAACACCTTTCAAGACTACAAG
GAGGAGCAGGCGTCCAAGGGCATCGCGGCGGCGTAGTTCTCTGGAGCTTG
CTGCGCTCACGATTTTTGTTGGTCCTGGGCAGAAGGACGATGTTCGCGGC
GGGCAGACGGAAGCGTAGCACGGCGAGACGCGGAGTCGCCGCGGTAGATA
TCGGCGCCCAGGTTAGACTCTCGGCGCTGACCTGGGCGTCCGCGTCTTGA
CGTAACTCACCGTTGCTGGCGATCGTGCTGAAAACATTGGGTAGGCTACT
AGTACAATGTGTATGGTGTTTAGGCGACGGCGAGGAGGGTTCTCCGCTCT
TTGCGCGATGTTTCTAGACTGTTTGGCCGTTTGTTCTTGTTCTCTTATTT
GGCTATGTCCAGTGTCACACTCTAGCTCGTCTGTTCGTTCTTCTCTTGAC
TGGCAGCTTGGCTTTGCGCAATTTATCTTCAGCCTCCGGCCCGCCCGCGC
TGCATATTTTTTTGTATGGTTGAAAAGCCTTCGTCCCAGCTACCGGAAAT
GCCGCGGCCCCCTTGGTAAAGGCGGTCAATGGTTGTTTGGGTAGTGGACA
GCAGACCAGGCTGCGTTGGGAAACGCACGATGCCTCGCAAGCCTCCGTGG
GCTTGTTGGCCTAGGTGTAGACATGTCCCTTTTGAGAGTTTAAATTTTCG
CATGACGTCCTGGAGTAAAATGCCCACC
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Coding sequence (CDS) from alignment at H-elongata_contig16304:127..5304+

>mRNA_H-elongata_contig16304.4001.1 ID=mRNA_H-elongata_contig16304.4001.1|Name=mRNA_H-elongata_contig16304.4001.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1866bp|location=Sequence derived from alignment at H-elongata_contig16304:127..5304+ (Himanthalia elongata Himel1 dioecious)
ATGCGTTCTTGGGTCGTGGTTGTGTTCTTCTTGACGAACTTGGTCGAGTC
ATTCCATGTCAACACCTTCAATAGACAGATTATCTTCCGCAGATGCGTTC
TTGGGTCGTGGTTGTGTTCTTCTTGACGAACTTGGTCGAGTCATTCCATG
TCAACACCTTCAATAGACAGATTATCTTCCGCAGGACGCGGTTGGCTGCG
CACCCCTCTGCCAGAGCTATATCCATGGGTACATCGTCCTTGCCCACCTT
GGAAAGCTTACGGAAAACTGGATTGATGACCATTGCCGCGTTAGTGATCG
GAAGCTCTCCCCTTCACGCTTTCGCAGCTTCGATTCCGGCCGTGGCGGAG
GAGCTCACAGCTGAAAACCCAGCTACGGTTCAGGAGCTCTCGCCCGCCGA
GATGCTTGTGAAGAAGACTACCGAGATACAGGACGCGGTTGGCTGCGCAC
CCCTCTGCCAGAGCTATATCCATGGGTACATCGTCCTTGCCCACCTTGGA
AAGCTTACGGAAAACTGGATTGATGACCATTGCCGCGTTAGTGATCGGAA
GCTCTCCCCTTCACGCTTTCGCAGCTTCGATTCCGGCCGTGGCGGAGGAG
CTCACAGCTGAAAACCCAGCTACGGTTCAGGAGCTCTCGCCCGCCGAGAT
GCTTGTGAAGAAGACTACCGAGATACAGCGGAAAAGACTCAAGGAGGAGG
AGCAGCAACAGCTCCAAGGGGATGTCGACATGGCAGAAGGGGATCTAATT
GCCAGGCGGAAAAGACTCAAGGAGGAGGAGCAGCAACAGCTCCAAGGGGA
TGTCGACATGGCAGAAGGGGATCTAATTGCCAGGGTGCGAGTATCGATCA
AAGCTGACCTCTACGAACTGGGGGCTCCAGACGTCTCCGGTTTCCCGGGC
TTAGACACCGATGACGCACGGCTTATCGTAGCGGCGTTCGGGAAGGATGG
CCCACCGGTCGCCGCCAAGCGGCTCACCATCAAGGGGCGACCATTCCCCG
TGATCGTTGAGCTAACAGTGAACGACCTGGCGTTTCCACTGACAAAGGTG
CGAGTATCGATCAAAGCTGACCTCTACGAACTGGGGGCTCCAGACGTCTC
CGGTTTCCCGGGCTTAGACACCGATGACGCACGGCTTATCGTAGCGGCGT
TCGGGAAGGATGGCCCACCGGTCGCCGCCAAGCGGCTCACCATCAAGGGG
CGACCATTCCCCGTGATCGTTGAGCTAACAGTGAACGACCTGGCGTTTCC
ACTGACAAAGGATGCGTGGAAGCAAGACGGTCGCTCGTTGGAGGACATCG
GGCTGGCTGTCGAGATAGACCCCGATGGAAAAGCGGCGACGCTCGACTCG
GGGAGCCTGACGGGGTACGGAGTCAGCAAGCCACTGCGCATTGGGGCACA
GGATGCGTGGAAGCAAGACGGTCGCTCGTTGGAGGACATCGGGCTGGCTG
TCGAGATAGACCCCGATGGAAAAGCGGCGACGCTCGACTCGGGGAGCCTG
ACGGGGTACGGAGTCAGCAAGCCACTGCGCATTGGGGCACAGATGGAACG
CACGGAGGCCACGATAGAGCTGATACCCAACCCGCAACTACAGGAGAGGG
CTGAGCAGACCCTGCCCCCGGAAGGACTGGAGCAACTGGAGCGCGTCGAT
GCTATGTTGGATGGAACGCACGGAGGCCACGATAGAGCTGATACCCAACC
CGCAACTACAGGAGAGGGCTGAGCAGACCCTGCCCCCGGAAGGACTGGAG
CAACTGGAGCGCGTCGATGCTATGTTGGACTACAAGGAGGAGCAGGCGTC
CAAGGGCATCGCGGCGGCGTAGACTACAAGGAGGAGCAGGCGTCCAAGGG
CATCGCGGCGGCGTAG
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