mRNA_H-elongata_contig162841.3988.1 (mRNA) Himanthalia elongata Himel1 dioecious
|
Overview
Homology
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: D8LTW0_ECTSI (cGMP-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTW0_ECTSI) HSP 1 Score: 243 bits (619), Expect = 8.630e-77 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRSD 381
GGF S A+FF GCVVLPLQYLH MSVAYRDLKPENLLL QDGYLKVIDFGFAKRIPFKKD +QTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPF+DPRQAEIFKKAIRS+
Sbjct: 183 GGFSLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDTTLQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSE 309
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A6H5JZB9_9PHAE (cGMP-dependent protein kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZB9_9PHAE) HSP 1 Score: 246 bits (628), Expect = 5.430e-74 Identity = 117/127 (92.13%), Postives = 120/127 (94.49%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRSD 381
GGF S A+FF GCVVLPLQYLH MSVAYRDLKPENLLL QDGYLKVIDFGFAKRIPFKKDN VQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPF+DPRQAEIFKKAIRS+
Sbjct: 750 GGFSLSVASFFCGCVVLPLQYLHQMSVAYRDLKPENLLLGQDGYLKVIDFGFAKRIPFKKDNTVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFTDPRQAEIFKKAIRSE 876
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A835YV03_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV03_9STRA) HSP 1 Score: 228 bits (580), Expect = 3.210e-68 Identity = 108/127 (85.04%), Postives = 117/127 (92.13%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRSD 381
GGF P+TA F+ G VVL LQYLH M+VAYRDLKPENLL+AQDGYLK+IDFGFAKRIPFKK +QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL GRTPF+DPRQAEIFKKAIRSD
Sbjct: 535 GGFQPATARFYGGSVVLCLQYLHKMNVAYRDLKPENLLVAQDGYLKMIDFGFAKRIPFKKGATMQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLLGRTPFTDPRQAEIFKKAIRSD 661
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A835Z7Z1_9STRA (cGMP-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z1_9STRA) HSP 1 Score: 224 bits (571), Expect = 2.960e-67 Identity = 107/127 (84.25%), Postives = 115/127 (90.55%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRSD 381
GGF TA F+ G VVL LQYLH MSVAYRDLKPENLL+AQDGY+K+IDFGFAKRIPFKK +QTKSFTLCGTPDYLAPELVLSRGHDK+VDYWALGCF+YELL GRTPF+DPRQAEIFKKAIRSD
Sbjct: 483 GGFQAHTARFYGGSVVLCLQYLHKMSVAYRDLKPENLLVAQDGYIKMIDFGFAKRIPFKKGATLQTKSFTLCGTPDYLAPELVLSRGHDKSVDYWALGCFIYELLVGRTPFTDPRQAEIFKKAIRSD 609
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A7S3XNP9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNP9_HETAK) HSP 1 Score: 196 bits (499), Expect = 8.540e-60 Identity = 90/126 (71.43%), Postives = 104/126 (82.54%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF STA F+ CVVL L+Y+H + VAYRDLKPENLLL G+LK+IDFGFAK IPFKK N +QTKSFTLCGTPDYLAPELV S+GHDK+VDYWALGC +YEL+CG+TPF D Q E+FKK + S
Sbjct: 133 GGFRVSTARFYAACVVLCLEYVHGLGVAYRDLKPENLLLDNQGFLKMIDFGFAKYIPFKKGNQIQTKSFTLCGTPDYLAPELVRSKGHDKSVDYWALGCLVYELICGQTPFQDNYQPEVFKKIVNS 258
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A7S2CPB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CPB2_9STRA) HSP 1 Score: 177 bits (449), Expect = 3.280e-52 Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF S A F+ GCV+ QY+H VAYRDLKPENLL+ G+ K+IDFGFAKRIPF KD V KSFT+CGTP+YL+PEL+ S GHDK+VDYWALGC +YELL G+TPF D Q EIF+K S
Sbjct: 137 GGFVESAAMFYAGCVISAFQYVHDKGVAYRDLKPENLLIDSAGFCKIIDFGFAKRIPFMKDGKVCAKSFTICGTPEYLSPELIQSSGHDKSVDYWALGCLVYELLVGQTPFQDDNQREIFRKITNS 262
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A4D9D4B2_9STRA (cGMP-dependent protein kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4B2_9STRA) HSP 1 Score: 177 bits (449), Expect = 2.370e-50 Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF F+ C + L Y+H VAYRDLKPENLLL GYLK+IDFGFAK +PF+K+ +Q K+FTLCGTP+YLAPELVLSRGHDK+VDYWA GC +YEL+ GRTPF D + EIFKK I S
Sbjct: 358 GGFLKGHTQFYAACALSALDYIHKKDVAYRDLKPENLLLDSQGYLKIIDFGFAKTVPFQKNGNLQLKTFTLCGTPEYLAPELVLSRGHDKSVDYWAFGCLVYELMVGRTPFQDEQHDEIFKKIIHS 483
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A7S2R9B3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9B3_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.860e-50 Identity = 76/126 (60.32%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF + F+ CVV ++H + VAYRDLKPENLL+ GY+KVIDFGFAK IPF+K + KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC LYELL G TPF++ E+FK+ ++S
Sbjct: 58 GGFVEPVSQFYCSCVVSAFSHIHGLGVAYRDLKPENLLMDATGYIKVIDFGFAKHIPFEKRGKIHHKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLLYELLVGHTPFANDNHQEVFKRILQS 183
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A7S2G969_9STRA (cGMP-dependent protein kinase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G969_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.880e-49 Identity = 73/126 (57.94%), Postives = 99/126 (78.57%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF S A F+ GC++ Y+H M+VAYRDLKPEN+++ GYLK+IDFGFAK IP+KK+ + + S+T+CGTP+YLAPEL+ S+GHDK+VDYWALGC +YEL+CGRTPF+ Q ++F+ + S
Sbjct: 564 GGFSDSAAMFYSGCIISAFHYIHEMNVAYRDLKPENIMIDSSGYLKMIDFGFAKTIPYKKNGEIHSSSYTICGTPEYLAPELIQSKGHDKSVDYWALGCLVYELICGRTPFAHENQRDLFQNILYS 689
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Match: A0A7S2RAC3_9STRA (cGMP-dependent protein kinase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAC3_9STRA) HSP 1 Score: 176 bits (445), Expect = 8.710e-49 Identity = 81/126 (64.29%), Postives = 95/126 (75.40%), Query Frame = 1
Query: 1 GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFGFAKRIPFKKDNVVQTKSFTLCGTPDYLAPELVLSRGHDKAVDYWALGCFLYELLCGRTPFSDPRQAEIFKKAIRS 378
GGF A F+ GCV+ Y+H VAYRDLKPENLL+ +G+LKVIDFGFAKRIPF K+ KSFTLCGTP+YL+PELVLS+GHDK+ DYWALGC +YELL G TPF Q EIFK+ I+S
Sbjct: 590 GGFSVPHAQFYSGCVISAFNYIHGKGVAYRDLKPENLLVTAEGFLKVIDFGFAKRIPFVKNGRTSAKSFTLCGTPEYLSPELVLSKGHDKSADYWALGCLVYELLIGHTPFQHDSQQEIFKRIIQS 715 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162841.3988.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig162841.3988.1 >prot_H-elongata_contig162841.3988.1 ID=prot_H-elongata_contig162841.3988.1|Name=mRNA_H-elongata_contig162841.3988.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=127bp GGFHPSTAAFFFGCVVLPLQYLHHMSVAYRDLKPENLLLAQDGYLKVIDFback to top mRNA from alignment at H-elongata_contig162841:476..856- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig162841.3988.1 ID=mRNA_H-elongata_contig162841.3988.1|Name=mRNA_H-elongata_contig162841.3988.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=381bp|location=Sequence derived from alignment at H-elongata_contig162841:476..856- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig162841:476..856- >mRNA_H-elongata_contig162841.3988.1 ID=mRNA_H-elongata_contig162841.3988.1|Name=mRNA_H-elongata_contig162841.3988.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=762bp|location=Sequence derived from alignment at H-elongata_contig162841:476..856- (Himanthalia elongata Himel1 dioecious)back to top |