mRNA_H-elongata_contig16281.3985.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5JQV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQV6_9PHAE) HSP 1 Score: 295 bits (755), Expect = 3.920e-91 Identity = 153/332 (46.08%), Postives = 203/332 (61.14%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLP 996
Q+ I E +R+ TAFRDADG LW+ R G GL +P+AF L + G+ +WLDD I S H L L L+VN F EF+GM++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ +PW + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF S R+S+TDA R PT+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L PK HRWALR ME+DM L+W+ ++ V +A++RLP
Sbjct: 253 QMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLP 580
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5KIS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIS6_9PHAE) HSP 1 Score: 288 bits (738), Expect = 5.560e-91 Identity = 150/332 (45.18%), Postives = 201/332 (60.54%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLP 996
Q+ I E +R+ TAFRDADG LW+ R G GL +P+AF L + G+ +WLDD I S H L L L+VN F EF+GM++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ +PW + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF + R+ +TDA R T+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L PK HRWALR ME+DM L+W+ ++ V +A++RLP
Sbjct: 113 QMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCPFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFANHRFLQTDARRGLTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLP 440
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5KFK7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFK7_9PHAE) HSP 1 Score: 295 bits (755), Expect = 1.730e-88 Identity = 153/332 (46.08%), Postives = 203/332 (61.14%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLP 996
Q+ I E +R+ TAFRDADG LW+ R G GL +P+AF L + G+ +WLDD I S H L L L+VN F EF+GM++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ +PW + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF S R+S+TDA R PT+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L PK HRWALR ME+DM L+W+ ++ V +A++RLP
Sbjct: 255 QMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLP 582
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5KEH2_9PHAE (RNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEH2_9PHAE) HSP 1 Score: 295 bits (755), Expect = 1.030e-86 Identity = 153/332 (46.08%), Postives = 203/332 (61.14%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLP 996
Q+ I E +R+ TAFRDADG LW+ R G GL +P+AF L + G+ +WLDD I S H L L L+VN F EF+GM++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ +PW + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF S R+S+TDA R PT+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L PK HRWALR ME+DM L+W+ ++ V +A++RLP
Sbjct: 777 QMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLHRWALRLMEYDMELEWKAGVEHVVPDALSRLP 1104
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5LHQ7_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LHQ7_9PHAE) HSP 1 Score: 285 bits (730), Expect = 1.050e-84 Identity = 148/334 (44.31%), Postives = 199/334 (59.58%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRG-IRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLPR 999
QL I E +RH TAFRDA G+L++ RCG GL T+P+ F+ + G L P + +G + WLDD + S + H L+ F L +V+ + S FC +EF+G +V R RP+PS I AV L P V EVR LG+ GYLR F P++STL API DLLRD F SKR+R VPW Q AF +I+ L + +LA PDW F LH DASE AGAVLTQ + E + + S R+++ + S DRE +GV++ + +F Y R F L+ DC+AL WLF SQ LS K HRW+LR M+ D+ LKW+ + +A++RL R
Sbjct: 217 QLSIKEADRHKTAFRDARGRLYEFTRCGFGLTTIPAVFSAHLGDTLRPTENKGGVERWLDDILLHSATLEEHMALIEEVFDLLQGVGYSVHFKKSMFCMSEVEFLGAMVGRSGVRPAPSKIRAVQELEMPATVGEVRAFLGLAGYLRGFVPDFSTLTAPITDLLRDKAFSSKRARNRRVPWGAAQIEAFQAVIKALVTHPVLAAPDWHLPFTLHTDASELAAGAVLTQPVEN--REAPLGYASHRFTRAEEKLSANDREVLGVLYGIEQFHTYLQHRRFTLVTDCAALTWLFTSQNLSSKMHRWSLRLMQFDIDLKWRKGEDHTAPDALSRLRR 548
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5JF70_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF70_9PHAE) HSP 1 Score: 267 bits (683), Expect = 6.120e-81 Identity = 137/335 (40.90%), Postives = 202/335 (60.30%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLPREG 1005
QL + E ++H TAFRD G+L + RC G+ T+P+ F+ G L + +G+ WLDD A+ ++ + H+ LL L + T + S+F P LEF+G++V R RP+PS + AV + P+ V E+R LG+ YLR F PN+S + AP+ D+LR+ F SKR+R V Q A++ L+E L + +L LP+W + F LH DAS AG+VLTQQ + E + + S+R S+++ S DRE +GV++ + F+ Y R F LI DC+AL+WLF SQ LS K HRWAL+ M +DM LKW+ T + V +A++RL R+G
Sbjct: 186 QLELEETDKHKTAFRDPTGRLLESNRCAFGITTIPAVFSATLGDDLRELLGKGLEKWLDDIALHTKTLEEHFVLLEKVLTILKQKGYTGHFVKSEFLLPELEFLGVMVGRDGTRPAPSKVKAVQEMELPSTVGELRSFLGLANYLRGFVPNFSAIAAPLSDILRNKEFSSKRARNKRVVMGPPQIEAYMKLVEKLTTYPVLVLPNWLEPFTLHTDASLIAAGSVLTQQVEN--REAPVGYASKRLSRSEEKLSSNDREVLGVLYALEHFKVYLQHRQFTLITDCAALMWLFTSQKLSSKMHRWALKMMAYDMVLKWRKGTDHVVPDALSRLRRKG 518
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5KHG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHG6_9PHAE) HSP 1 Score: 275 bits (704), Expect = 6.240e-80 Identity = 140/338 (41.42%), Postives = 204/338 (60.36%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRG-IRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLPREGEP 1011
Q+ I +R TAFRDA G+L+Q RC GL T+P+ F+ G L P + +G I WLDD I S + H + + L E +V+ S FC +EF+G++V R RP PS I A+T + +PT V +R +GM +LR F ++S +VAP+ D+LR+ F +KR+R +++PW +EQ A +I L S +L PDW F LH DASE AGAVLTQ + I F S RW++++A R+PTDRE ++ + F+ Y +PF L+ DCSA+ WLF+SQ LS +R+ALR ME MTL+W+ T++ + +A++RLP++G P
Sbjct: 911 QIPIKPSDRPKTAFRDARGRLYQFTRCSFGLTTIPAVFSALLGDTLRPTESKGGIERWLDDILIHSETLEEHLKKIDEVLKLLQEAGFSVHFDKSLFCMQEVEFLGVMVGRSGVRPPPSKIKAITEMEKPTTVGGLRSFVGMANFLRDFVKDFSAIVAPLTDILRNKDFSTKRARNLAIPWGEEQDAAHDAIIRALVSPPVLLPPDWELPFTLHTDASERAAGAVLTQVVEDH--DTAIGFGSHRWTQSEAKRAPTDREVRAALFGLEHFRIYLLHQPFTLVTDCSAITWLFQSQHLSSTMYRYALRMMEFTMTLQWRKGTEHTIPDALSRLPQKGPP 1246
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5K9Z4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Z4_9PHAE) HSP 1 Score: 260 bits (664), Expect = 5.150e-79 Identity = 137/301 (45.51%), Postives = 179/301 (59.47%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYH 903
Q+ I E +R+ TAFRDADG LW+ R G GL +P+AF L + G+ +WLDD I S H L L L+VN F EF+GM++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ +PW + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF S R+S+TDA R PT+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L PK H
Sbjct: 69 QMEIAEKDRYKTAFRDADGMLWEFTRAGFGLTVLPAAFTRRVKSALGHLA--GVFSWLDDILIASDSWEEHLATLTLVLNRLLAAGLSVNFAKCIFGAASQEFLGMIIDSTGLYPAPSKLDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLTNILRNKAFASKRARKLPIPWSVAEEDAFQSLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFASHRFSQTDARRGPTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPKLH 365
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5JIH2_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIH2_9PHAE) HSP 1 Score: 251 bits (642), Expect = 2.140e-78 Identity = 133/305 (43.61%), Postives = 179/305 (58.69%), Query Frame = 1
Query: 82 GVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQQGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLP 996
G GL +P+AF L + G+ +WLDD I S H L L+VN F EFVG ++D P+PS +DA+ + RP VEE+R LG+TGYLRQF PNYS AP+ ++LR+ F SKR+R++ + W + AF L E LAS +LA PD + F+LH DAS G GA L Q + + +AF S R+S+TDA R T+RECMGV+W V F+PY GR F L+ DCSAL WLF+S+ L P HRWALR ME+D+ L+W+ ++ V +A++RLP
Sbjct: 8 GFGLTVLPAAFTRRVKSALGHLS--GVFSWLDDILIASDTREEHLATQTLVMNRLLASGLSVNFAKCIFGAASQEFVGTIIDSTGLYPAPSKVDAIARMPRPHTVEELRTFLGLTGYLRQFVPNYSLTAAPLANILRNKAFASKRARKLPIQWSAAEEDAFQYLRETLASPKVLAFPDLERPFELHTDASTLGVGASLMQTIDG--VTRAVAFASHRFSQTDARRGHTERECMGVLWAVDHFRPYLAGRRFKLVTDCSALTWLFRSRELCPTLHRWALRLMEYDLELEWKAGVEHVVPDALSRLP 308
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Match: A0A6H5KBF4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBF4_9PHAE) HSP 1 Score: 260 bits (664), Expect = 4.460e-75 Identity = 140/339 (41.30%), Postives = 197/339 (58.11%), Query Frame = 1
Query: 1 QLGIHEDERHLTAFRDADGKLWQCVRCGVGLKTVPSAFANYAGGRLMPVKCRGIRNWLDDFAIPSRVVRGHWPLLRTTFQCLNEGKLTVNLQNSKFCQPGLEFVGMVVDRKKNRPSPSMIDAVT*LSRPTIVEEVRVLLGMTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVLIECLASLAILALPDWGKGFQLHADASETGAGAVLTQQ-QGSPALEKVIAFESRRWSKTDALRSPTDRECMGVMWNVAKFQPYRWGRPFMLIIDCSALIWLFKSQALSPKYHRWALRFMEHDMTLKWQHDTQNQVVEAMARLPREGEPS 1014
Q+ I E +R+ TAFRDADG L++ R G GL +PSAF L V G+ +WLDD + + H L L L+VN F EF+GM++D P+PS ++A+ + RP VE++R L+ AP+ D+LR+ F SKR+R++ + W + + AF L +CLAS +LA PD F+LH+DAS GAGA L Q G+P ++IAF S ++S+TDA R PT+RECMGV+W V F+PY GR F ++ DCSAL WLF+S+ L PK HRWALR ME+D+ L+W+ + + +A++RLP PS
Sbjct: 415 QIEIAEKDRYKTAFRDADGMLYEFTRAGFGLTVLPSAFTRRVKSALGIVD--GVFSWLDDILVANETWEEHLAALVLVLTRLRAAGLSVNFPKCIFGASSQEFLGMIIDATGMHPAPSKLEAIANMPRPQTVEDLRTLVA----------------APLTDILRNKDFASKRARKLPIQWGQAEEHAFHHLRQCLASPTVLAFPDPNAPFELHSDASSVGAGATLLQTIDGTP---RIIAFASHKFSRTDARRGPTERECMGVLWGVDHFKPYLAGRQFKVVTDCSALTWLFRSRELCPKLHRWALRLMEYDIGLEWRAGVHHVLPDALSRLPVASSPS 732 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16281.3985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16281.3985.1 >prot_H-elongata_contig16281.3985.1 ID=prot_H-elongata_contig16281.3985.1|Name=mRNA_H-elongata_contig16281.3985.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp MTGYLRQFAPNYSTLVAPIPDLLRDPRFRSKRSRRMSVPWEKEQTRAFLVback to top mRNA from alignment at H-elongata_contig16281:6406..7419- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16281.3985.1 ID=mRNA_H-elongata_contig16281.3985.1|Name=mRNA_H-elongata_contig16281.3985.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1014bp|location=Sequence derived from alignment at H-elongata_contig16281:6406..7419- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16281:6406..7419- >mRNA_H-elongata_contig16281.3985.1 ID=mRNA_H-elongata_contig16281.3985.1|Name=mRNA_H-elongata_contig16281.3985.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig16281:6406..7419- (Himanthalia elongata Himel1 dioecious)back to top |