prot_H-elongata_contig162676.3975.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig162676.3975.1
Unique Nameprot_H-elongata_contig162676.3975.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length61
Homology
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: D8LFD9_ECTSI (UBP-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFD9_ECTSI)

HSP 1 Score: 76.6 bits (187), Expect = 7.090e-15
Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0
Query:   15 QLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAF 57
            +L CETC I HNLWICMVCGHIGCGRYT EHA+ HFR S H +
Sbjct:  668 ELCCETCRIAHNLWICMVCGHIGCGRYTGEHASRHFRLSGHTY 710          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A835YX21_9STRA (UBP-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX21_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.040e-12
Identity = 27/44 (61.36%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   14 PQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAF 57
            P + CE C I HNLW+CMVCGHIGCGRYT EHA  H   + H +
Sbjct:  341 PPVACEACRIAHNLWVCMVCGHIGCGRYTAEHAKAHHAQTGHTY 384          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A7J7IGV2_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IGV2_9RHOD)

HSP 1 Score: 68.2 bits (165), Expect = 6.780e-12
Identity = 26/56 (46.43%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    6 FSSLVPSQPQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAFRRDI 61
            F ++     +  CE CH+   LWIC+VCGH+GCGRY Q HA  H+R++ H F  +I
Sbjct:  469 FVAIATPPVETACEVCHVQKQLWICLVCGHVGCGRYVQHHALAHYRSTHHVFCMEI 524          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A0G2H0N8_9EURO (Putative ring and ubp finger domain n=1 Tax=Phaeomoniella chlamydospora TaxID=158046 RepID=A0A0G2H0N8_9EURO)

HSP 1 Score: 66.2 bits (160), Expect = 3.130e-11
Identity = 27/51 (52.94%), Postives = 34/51 (66.67%), Query Frame = 0
Query:   11 PSQPQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAFRRDI 61
            PS   L CETCH  HNLW C++CG IGCGRY   HA  H++ + H+F  D+
Sbjct:   91 PSIEPLECETCHADHNLWQCLICGKIGCGRYDAAHAFQHYQTTSHSFAMDM 141          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: K3W6P2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6P2_GLOUD)

HSP 1 Score: 66.2 bits (160), Expect = 3.220e-11
Identity = 23/40 (57.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   18 CETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAF 57
            CE CH T +LWIC++CGH+GCGRY+ EHA  HF+ + H +
Sbjct:  305 CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHFQETSHTY 344          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: Q0D041_ASPTN (Uncharacterized protein n=2 Tax=Aspergillus terreus TaxID=33178 RepID=Q0D041_ASPTN)

HSP 1 Score: 65.9 bits (159), Expect = 4.400e-11
Identity = 24/49 (48.98%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   13 QPQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAFRRDI 61
            QP   C  CH   NLW+C++CGH+GCGRY   HA  H++++ HAF  D+
Sbjct:  301 QPPAECNVCHSDVNLWVCLICGHVGCGRYDGAHAFAHYKDTAHAFAMDL 349          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A2B7Z3A1_9EURO (Uncharacterized protein n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7Z3A1_9EURO)

HSP 1 Score: 65.9 bits (159), Expect = 4.420e-11
Identity = 23/44 (52.27%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   18 CETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAFRRDI 61
            C  CH   NLW+C++CGH+GCGRY + HA  HF+ + HAF  D+
Sbjct:  520 CNVCHSEENLWLCLICGHVGCGRYDEAHAFAHFKQTSHAFAMDL 563          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A1V9X330_9ACAR (BRCA1-associated protein-like n=1 Tax=Tropilaelaps mercedesae TaxID=418985 RepID=A0A1V9X330_9ACAR)

HSP 1 Score: 65.1 bits (157), Expect = 8.220e-11
Identity = 25/40 (62.50%), Postives = 29/40 (72.50%), Query Frame = 0
Query:   18 CETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAF 57
            C+TC  T NLWIC+VCGHIGCGRY   HAN H+  + H F
Sbjct:  323 CQTCGATENLWICLVCGHIGCGRYVAGHANTHYSRTEHTF 362          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: A0A662YFP2_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YFP2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.080e-10
Identity = 22/40 (55.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:   18 CETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAF 57
            CE CH T +LWIC++CGH+GCGRY+ EHA  H++ + H +
Sbjct:  282 CEVCHTTEHLWICLICGHVGCGRYSGEHAKQHYQETLHTY 321          
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Match: W0TD91_KLUMD (RING finger protein ETP1 n=1 Tax=Kluyveromyces marxianus (strain DMKU3-1042 / BCC 29191 / NBRC 104275) TaxID=1003335 RepID=W0TD91_KLUMD)

HSP 1 Score: 64.7 bits (156), Expect = 1.120e-10
Identity = 24/50 (48.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:   12 SQPQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHFRNSRHAFRRDI 61
            +QPQ  C  C+  +NLWIC++CGH+GCGRY  +HA  H+  + H F  D+
Sbjct:  273 NQPQPTCRKCNEKNNLWICLICGHLGCGRYNSQHAIRHYEETSHCFAMDL 322          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162676.3975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LFD9_ECTSI7.090e-1574.42UBP-type domain-containing protein n=2 Tax=Ectocar... [more]
A0A835YX21_9STRA1.040e-1261.36UBP-type domain-containing protein n=1 Tax=Tribone... [more]
A0A7J7IGV2_9RHOD6.780e-1246.43Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A0G2H0N8_9EURO3.130e-1152.94Putative ring and ubp finger domain n=1 Tax=Phaeom... [more]
K3W6P2_GLOUD3.220e-1157.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
Q0D041_ASPTN4.400e-1148.98Uncharacterized protein n=2 Tax=Aspergillus terreu... [more]
A0A2B7Z3A1_9EURO4.420e-1152.27Uncharacterized protein n=1 Tax=Polytolypa hystric... [more]
A0A1V9X330_9ACAR8.220e-1162.50BRCA1-associated protein-like n=1 Tax=Tropilaelaps... [more]
A0A662YFP2_9STRA1.080e-1055.00Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
W0TD91_KLUMD1.120e-1048.00RING finger protein ETP1 n=1 Tax=Kluyveromyces mar... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001607Zinc finger, UBP-typeSMARTSM00290Zf_UBP_1coord: 17..61
e-value: 7.1E-6
score: 35.5
IPR001607Zinc finger, UBP-typePFAMPF02148zf-UBPcoord: 18..57
e-value: 4.7E-13
score: 49.3
IPR001607Zinc finger, UBP-typePROSITEPS50271ZF_UBPcoord: 16..61
score: 13.298
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 4..61
e-value: 1.9E-15
score: 58.8
NoneNo IPR availablePANTHERPTHR24007BRCA1-ASSOCIATED PROTEINcoord: 15..57
NoneNo IPR availablePANTHERPTHR24007:SF7BRCA1-ASSOCIATED PROTEINcoord: 15..57
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 11..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig162676contigH-elongata_contig162676:224..406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig162676.3975.1mRNA_H-elongata_contig162676.3975.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig162676 224..418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig162676.3975.1 ID=prot_H-elongata_contig162676.3975.1|Name=mRNA_H-elongata_contig162676.3975.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=61bp
MLSLPFSSLVPSQPQLYCETCHITHNLWICMVCGHIGCGRYTQEHANGHF
RNSRHAFRRDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001607Znf_UBP
IPR013083Znf_RING/FYVE/PHD