prot_H-elongata_contig16265.3974.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16265.3974.1
Unique Nameprot_H-elongata_contig16265.3974.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length125
Homology
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5JUS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUS2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.200e-28
Identity = 65/144 (45.14%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDSQERQA----------------------LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            ML++ L+ +VGLVNGIR E VELV A     P LP +++V+F  Y+        + R+                       L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:  110 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 253          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5JFG8_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG8_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 3.840e-27
Identity = 65/144 (45.14%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDSQERQA----------------------LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            ML++ L+ +VGLVNGIR E VELV A     P LP +++V+F  Y+        + R+                       L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:  284 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 427          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5K4U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U7_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 4.500e-27
Identity = 65/144 (45.14%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDSQERQA----------------------LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            ML++ L+ +VGLVNGIR E VELV A     P LP +++V+F  Y+        + R+                       L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:    1 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 144          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5L976_9PHAE (ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L976_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 1.020e-26
Identity = 65/144 (45.14%), Postives = 83/144 (57.64%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDSQERQA----------------------LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            ML++ L+ +VGLVNGIR E VELV A     P LP +++V+F  Y+        + R+                       L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct: 1415 MLSKNLYQQVGLVNGIRGEVVELVCADDAPPPKLPLYVVVKFEGYSGGEWSSQERYRRCVPISPVDTTWQDGGTQVRTQLPLRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 1558          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5KSF1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSF1_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.890e-18
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   60 LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:   20 LRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 82          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: UPI000A2A6B3A (uncharacterized protein LOC110247455 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6B3A)

HSP 1 Score: 89.0 bits (219), Expect = 4.070e-18
Identity = 53/140 (37.86%), Postives = 77/140 (55.00%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPACMQDS-------------------QERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 119
            MLT  LW+ VGL NG     V++++A   + P LP  ++VRF  Y  P+  +D                    QERQ L L L   +T+HKSQ  T+  A ID+ KSE T G+++V IS  K L  L++EP++F+RL+ +
Sbjct:  547 MLTMNLWASVGLCNGATGTVVDIIYAVDHRPPDLPIAVIVRFDNYQGPSLREDLPMCVPICPITVSAQALEGVQERQQLPLKLAYALTIHKSQGLTLSKAWIDIGKSEKTPGISYVAISRVKTLSSLVIEPMTFERLTAI 686          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6S7JIW3_PARCT (ATP-dependent DNA helicase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JIW3_PARCT)

HSP 1 Score: 88.2 bits (217), Expect = 7.860e-18
Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 0
Query:    1 MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPA------CM------------QDSQERQALALCLG--ITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKL 119
            MLT  LW+ VGL NG     V++++A     P LP  +LV+F  Y  P       C+              + ERQ L L L   +T+HKSQ  T+E A +D+ K E T G+T+V +S A++L  L++EP+++DRLS +
Sbjct:  954 MLTMNLWASVGLCNGASGTIVDIIYAKDHHPPDLPIAVLVKFDEYRGPNFCSIPFCVPIPPVTASVNIDNKTLERQQLPLTLAWALTIHKSQGMTLEKAWVDIGKKECTLGITYVALSRARNLTSLVIEPMTYDRLSSI 1092          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5KFN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFN2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 8.990e-18
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   60 LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:   18 LRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 80          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5KCP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP5_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.760e-17
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   60 LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:   18 LRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 80          
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Match: A0A6H5JMH2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMH2_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.800e-17
Identity = 41/63 (65.08%), Postives = 48/63 (76.19%), Query Frame = 0
Query:   60 LALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCAKHLVDLLVEPVSFDRLSKLGEN 122
            L LC  ITMHKSQ QT+  AVIDL   EA +GLTFVC+S AK LVDL+VEP+SFDR+  LG +
Sbjct:   84 LRLCWAITMHKSQGQTLAKAVIDLGPKEACTGLTFVCLSRAKRLVDLMVEPMSFDRIGNLGNS 146          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16265.3974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JUS2_9PHAE3.200e-2845.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG8_9PHAE3.840e-2745.14Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K4U7_9PHAE4.500e-2745.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L976_9PHAE1.020e-2645.14ATP-dependent DNA helicase n=4 Tax=Ectocarpus sp. ... [more]
A0A6H5KSF1_9PHAE3.890e-1865.08Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
UPI000A2A6B3A4.070e-1837.86uncharacterized protein LOC110247455 n=1 Tax=Exaip... [more]
A0A6S7JIW3_PARCT7.860e-1837.41ATP-dependent DNA helicase n=1 Tax=Paramuricea cla... [more]
A0A6H5KFN2_9PHAE8.990e-1865.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCP5_9PHAE1.760e-1765.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JMH2_9PHAE1.800e-1765.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16265contigH-elongata_contig16265:4544..4996 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16265.3974.1mRNA_H-elongata_contig16265.3974.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16265 3719..4996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16265.3974.1 ID=prot_H-elongata_contig16265.3974.1|Name=mRNA_H-elongata_contig16265.3974.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
MLTRKLWSEVGLVNGIREEAVELVWATSEKAPALPEFILVRFYWYADPAC
MQDSQERQALALCLGITMHKSQRQTVEMAVIDLEKSEATSGLTFVCISCA
KHLVDLLVEPVSFDRLSKLGENRL*
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