prot_H-elongata_contig162561.3971.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig162561.3971.1
Unique Name	prot_H-elongata_contig162561.3971.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	84

Homology

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BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: D7FKF6_ECTSI (VASt domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKF6_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.630e-17
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCAVESRILLHGRMYVT+TFVCFYSNLFGFEK+IKIPF
Sbjct:   36 DFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPF 75

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A6H5L0Q2_9PHAE (VASt domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Q2_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 2.640e-17
Identity = 38/40 (95.00%), Postives = 40/40 (100.00%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCAVESRILLHGRMYVT+TFVCFYSNLFGFEK+IKIPF
Sbjct:   75 DFSCAVESRILLHGRMYVTNTFVCFYSNLFGFEKIIKIPF 114

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: F0Y4G3_AURAN (GRAM domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4G3_AURAN)

HSP 1 Score: 75.9 bits (185), Expect = 2.640e-16
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCA+E +ILLHGR+YVT+ F+CFYSNLFGFEK IKIP+
Sbjct:    2 DFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPY 41

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BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A7S2STC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STC3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 2.730e-15
Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCAVE +ILLHGRMYVTD F+CFYSNLFGFEK IKIP+
Sbjct:   44 DFSCAVERKILLHGRMYVTDKFICFYSNLFGFEKKIKIPY 83

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A482S830_9ARCH (GRAM domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S830_9ARCH)

HSP 1 Score: 72.4 bits (176), Expect = 4.180e-15
Identity = 30/42 (71.43%), Postives = 36/42 (85.71%), Query Frame = 0

Query:   41 LADFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            L DFSCAVES +LLHGRMY++  F+CFYSNLFG EK I+IP+
Sbjct:    4 LLDFSCAVESTVLLHGRMYISTRFICFYSNLFGLEKKIRIPY 45

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BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: W7TDU9_9STRA (Gram domain-containing protein 1a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TDU9_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.080e-14
Identity = 33/40 (82.50%), Postives = 36/40 (90.00%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            D SCAVES+ILLHGR+Y+TD FVCFYSN FGFEK IKIPF
Sbjct:  119 DASCAVESKILLHGRIYITDKFVCFYSNFFGFEKKIKIPF 158

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BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A8J2ST97_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2ST97_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.240e-14
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCA+E +ILLHGR+YVT+ F+CFYSNLFGFEK IKIP+
Sbjct:   63 DFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPY 102

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A7S3NLX8_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NLX8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.390e-14
Identity = 31/40 (77.50%), Postives = 37/40 (92.50%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCA+E +ILLHGR+YVT+ F+CFYSNLFGFEK IKIP+
Sbjct:  167 DFSCAIERKILLHGRLYVTERFICFYSNLFGFEKKIKIPY 206

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A836CDE2_9STRA (GRAM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.420e-13
Identity = 27/40 (67.50%), Postives = 36/40 (90.00%), Query Frame = 0

Query:   43 DFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            DFSCAV+SR+L+HGR+Y+T   + FYSN+FGFEK+I+IPF
Sbjct:    2 DFSCAVQSRVLMHGRLYITPGHLLFYSNIFGFEKIIRIPF 41

[Close]

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Match: A0A7S1U683_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U683_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 3.180e-12
Identity = 27/42 (64.29%), Postives = 35/42 (83.33%), Query Frame = 0

Query:   41 LADFSCAVESRILLHGRMYVTDTFVCFYSNLFGFEKMIKIPF 82
            L+DFSC+VES++ LHG MYVT  F+CFYSN FG+EK I +P+
Sbjct:   41 LSDFSCSVESKMTLHGHMYVTTRFICFYSNFFGYEKKILLPY 82

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot

BLAST of mRNA_H-elongata_contig162561.3971.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FKF6_ECTSI	2.630e-17	95.00	VASt domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5L0Q2_9PHAE	2.640e-17	95.00	VASt domain-containing protein (Fragment) n=1 Tax=...	[more]
F0Y4G3_AURAN	2.640e-16	77.50	GRAM domain-containing protein (Fragment) n=1 Tax=...	[more]
A0A7S2STC3_9STRA	2.730e-15	85.00	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A482S830_9ARCH	4.180e-15	71.43	GRAM domain-containing protein n=1 Tax=archaeon Ta...	[more]
W7TDU9_9STRA	3.080e-14	82.50	Gram domain-containing protein 1a n=1 Tax=Nannochl...	[more]
A0A8J2ST97_9STRA	3.240e-14	77.50	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A7S3NLX8_9STRA	3.390e-14	77.50	Hypothetical protein n=1 Tax=Aureoumbra lagunensis...	[more]
A0A836CDE2_9STRA	3.420e-13	67.50	GRAM domain-containing protein (Fragment) n=1 Tax=...	[more]
A0A7S1U683_9STRA	3.180e-12	64.29	Hypothetical protein (Fragment) n=1 Tax=Phaeomonas...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004182	GRAM domain	PFAM	PF02893	GRAM	coord: 41..82 e-value: 2.4E-7 score: 30.6
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 27..82 e-value: 2.6E-11 score: 45.4
IPR040147	Membrane-anchored lipid-binding protein Ysp2/Lam4-like	PANTHER	PTHR23319:SF4	AT22714P	coord: 41..82
None	No IPR available	PANTHER	PTHR23319	UNCHARACTERIZED	coord: 41..82

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig162561	contig	H-elongata_contig162561:473..724 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig162561.3971.1	mRNA_H-elongata_contig162561.3971.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig162561 473..724 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig162561.3971.1 ID=prot_H-elongata_contig162561.3971.1|Name=mRNA_H-elongata_contig162561.3971.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=84bp
PRGSNYIEILSLYQNPEVEEKRGPTNQLQAKSRRASSLDRLADFSCAVES
RILLHGRMYVTDTFVCFYSNLFGFEKMIKIPFW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR004182	GRAM
IPR011993	PH-like_dom_sf
IPR040147	Ysp2/Lam4-like