mRNA_H-elongata_contig162375.3963.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: D8LDW7_ECTSI (Endo-1,3-beta-glucanase, family GH17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDW7_ECTSI) HSP 1 Score: 257 bits (657), Expect = 7.990e-83 Identity = 124/201 (61.69%), Postives = 155/201 (77.11%), Query Frame = 1
Query: 1 QVMVYANNDAMMSIKRWKRWVEQNIRPIVDGLPDS---KEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHDASRDFVLFGPDAGYVDGDN--LRYCDMFSAQYDAVVSALSKLG--VAGADTMELVVTETGWPT 582
+VMV+ANN M+S+ W+ WVE ++ P+V GL KEIF AVG E+LAPW++E FG RL PC++EVY ALL TGL++RVKLVTPL MS+LG SYPPS G A A + +V+EVVR LV+IGSPFC+N+YPF AR ASRDFVLFGPD GY DG+ LRY +MF+AQ+DAVV+ +SKL + GAD +E+VVTE GWPT
Sbjct: 59 KVMVHANNHEMLSVSDWRAWVETHLSPVVGGLRGQRVHKEIFLAVGNEALAPWHVEMFGRRLVPCMKEVYTALLQTGLSDRVKLVTPLEMSILGASYPPSAGQVAEAHLEVVSEVVRFLVRIGSPFCINVYPFFAREHASRDFVLFGPDEGYTDGEGGCLRYTNMFNAQFDAVVTGISKLKDCIVGADQLEMVVTEVGWPT 259
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A2N9GIM0_FAGSY (Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GIM0_FAGSY) HSP 1 Score: 121 bits (303), Expect = 2.500e-29 Identity = 77/202 (38.12%), Postives = 114/202 (56.44%), Query Frame = 1
Query: 1 QVMVYANNDAMMSIKRWKR---WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHDA----SRDFVLFGPDAGYVDGD-NLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
++MV ND ++ ++ + WV+ N++P LP +K VG E L +N + + L ++ +YDALLG GL N +K+ + S++G SYPPS G F + + E++ V+ GSPF VN+YP+ A + S D+VL P+ G VD NL Y +M AQ DAV SALS LG G + + V+ETGWP+
Sbjct: 79 EIMVGLGNDVLLEMRDPQNALTWVKSNVQPY---LPATKITGIMVGNEVLTLYNTD-WSNSLVLAMQSIYDALLGLGLHNNIKVTSAHAFSIMGFSYPPSAGAFKQDLMQYMPEILDFHVQTGSPFHVNMYPYFAYRSSPKEISLDYVLSQPNNGSVDPTTNLSYDNMLFAQIDAVYSALSLLGYKG---VSVCVSETGWPS 273
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A6P5RF56_PRUAV (Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Prunus avium TaxID=42229 RepID=A0A6P5RF56_PRUAV) HSP 1 Score: 112 bits (281), Expect = 2.280e-26 Identity = 64/195 (32.82%), Postives = 111/195 (56.92%), Query Frame = 1
Query: 22 NDAMMSIK---RWKRWVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHD----ASRDFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
N+ + ++K + + W++Q+++P LP +K VG E L + + + L P ++ VY+AL+ GL+ +V + T ++++LG SYPPS+G F + ++ L ++ SPF +N YP+ A D ++VLF P++G VD NL Y +M AQ DAV +A+ +G +E+ ++ETGWP+
Sbjct: 65 NETLQNMKDPLKAQAWIQQHVQP---HLPQTKITCITVGNEILGGSDAQLM-SYLLPAMQSVYEALVDLGLSKQVTVTTAHSLTILGDSYPPSSGRFRQDLAEYIQPILSFLAQVNSPFLINAYPYFAYKDNPGEVPLEYVLFQPNSGMVDSVTNLHYDNMLDAQIDAVYAAIKAMGHTD---VEVRISETGWPS 252
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A540NK65_MALBA (Glucan endo-1,3-beta-D-glucosidase n=4 Tax=Malus TaxID=3749 RepID=A0A540NK65_MALBA) HSP 1 Score: 113 bits (282), Expect = 3.850e-26 Identity = 65/180 (36.11%), Postives = 103/180 (57.22%), Query Frame = 1
Query: 58 WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHD----ASRDFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
W++Q+++P LP +K VG E L N + + + L P ++ VY AL+ GL+ +V + T ++++LG SYPPS+G F + ++ ++ SPF +N YP+ A D S ++VLF P++G VD NL Y +M AQ DAV SA+ V G +E+ ++ETGWP+
Sbjct: 100 WIQQHVQP---HLPQTKITCINVGNEVLGGTNTQLW-SYLLPAMQSVYRALVNLGLSKQVAVTTAHSLTILGNSYPPSSGSFRQDLAQYIQPILSFHSQVNSPFLINAYPYFAYKDNPAEVSIEYVLFQPNSGMVDSVTNLHYDNMLDAQIDAVYSAIK---VMGHSDIEVRISETGWPS 272
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A5N5GHS2_9ROSA (Glucan endo-1,3-beta-D-glucosidase n=2 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5GHS2_9ROSA) HSP 1 Score: 112 bits (280), Expect = 5.400e-26 Identity = 64/180 (35.56%), Postives = 104/180 (57.78%), Query Frame = 1
Query: 58 WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHD----ASRDFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
W++Q+++P LP +K VG E L N + + + L P ++ VY AL+ GL+ +V + T ++++LG SYPPS+G F + ++ ++ SPF +N YP+ A D S ++VLF P++G VD NL Y +M AQ DAV SA+ +G + +E+ ++ETGWP+
Sbjct: 100 WIQQHVQP---HLPQTKITCINVGNEVLGGTNTQLW-SYLLPAMQSVYRALVNLGLSKQVAVTTAHSLTILGNSYPPSSGSFRQDLAQYIQPILSFHSQVNSPFLINAYPYFAYKDNPGEVSIEYVLFQPNSGMVDSVTNLHYDNMLDAQIDAVYSAIKAMGHSD---IEVRISETGWPS 272
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A5B6ZIV5_DAVIN (Putative glucan endo-1,3-beta-glucosidase 11 n=5 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZIV5_DAVIN) HSP 1 Score: 112 bits (281), Expect = 5.680e-26 Identity = 71/189 (37.57%), Postives = 104/189 (55.03%), Query Frame = 1
Query: 31 MMSIKRWKRWVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHDASR----DFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
M ++ + WV+ N++ LP +K AVG E L +N L P ++ V+ AL+ GL +V + T +++VL SYPPS G F +T+++ LVK GSPF +N YP+ A + DFVLF P++G VD NL Y +M AQ DAV SAL+ LG + + ++ETGWP+
Sbjct: 88 MRDPEKAEAWVKTNVQAY---LPATKITCIAVGNEVLT-FNDTSLSDSLLPAMQGVHTALVKLGLDKQVTVTTAHSLAVLESSYPPSAGAFRRDLTGCITQILNFLVKTGSPFLINAYPYFAYKANPKQIPLDFVLFQPNSGVVDPVSNLHYDNMLFAQIDAVYSALASLGY-NYKKLPVQISETGWPS 271
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A1D1Y5B6_9ARAE (Lichenase n=2 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1Y5B6_9ARAE) HSP 1 Score: 108 bits (270), Expect = 7.830e-25 Identity = 63/182 (34.62%), Postives = 96/182 (52.75%), Query Frame = 1
Query: 58 WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHA----RHDASRDFVLF-GPDAGYVDGDNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPTGA 588
WV N+ PD + + AVG E + + + + P + +YDAL GL ++K+ T +VLG S+PPS G F+ + ++ +V L + G+P VNIYP+ + + + D+ LF P+ D L Y ++F A DAV A+ K+G AG D +VV+ETGWPT A
Sbjct: 99 WVRTNVLAY---WPDVRFRYIAVGNEEILKPGVAEY---IYPAMLNIYDALASAGLQGQIKVSTSFQYNVLGESFPPSKGEFSQQVLPLMRPIVSFLARTGAPLLVNIYPYFSYAGNTKEIALDYALFTSPETVVKDPKGLEYQNLFDAMVDAVHFAMDKVGGAGVD---VVVSETGWPTDA 271
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A4Y1RLU5_PRUDU (Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLU5_PRUDU) HSP 1 Score: 109 bits (272), Expect = 9.970e-25 Identity = 62/180 (34.44%), Postives = 102/180 (56.67%), Query Frame = 1
Query: 58 WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHD----ASRDFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
W++Q+++P LP +K VG E L +I+ + L P ++ VY AL+ GL+ +V + T ++++LG SYPPS+G F + ++ ++ SPF +N YP+ A D ++VLF P++G VD NL Y +M AQ DAV +A+ +G +E+ ++ETGWP+
Sbjct: 108 WIQQHVQP---HLPQTKITCITVGNEILGGNDIQLM-SYLLPAMQSVYRALVDLGLSKQVTVTTAHSLTILGNSYPPSSGSFKQDLAQYIQPILSFHAQVNSPFLINAYPYFAYKDNPGEVPLEYVLFQPNSGMVDSVTNLHYDNMLDAQIDAVYAAIKAMGHTD---VEVRISETGWPS 280
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: M5WB99_PRUPE (Glucan endo-1,3-beta-D-glucosidase n=10 Tax=Prunus TaxID=3754 RepID=M5WB99_PRUPE) HSP 1 Score: 108 bits (271), Expect = 1.040e-24 Identity = 62/180 (34.44%), Postives = 101/180 (56.11%), Query Frame = 1
Query: 58 WVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHARHD----ASRDFVLFGPDAGYVDG-DNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
W++Q+++P LP +K VG E L N + + L P ++ VY AL+ GL+ +V + T ++++LG SYPPS+G F + ++ ++ SPF +N YP+ A D ++VLF P++G VD NL Y +M AQ DAV +A+ +G +E+ ++ETGWP+
Sbjct: 99 WIQQHVQP---HLPQTKITCITVGNEILGG-NDTQLMSYLLPAMQSVYRALVDLGLSKQVTVTTAHSLTILGNSYPPSSGSFKQDLAQYIQPILSFHAQVNSPFLINAYPYFAYKDNPGEVPLEYVLFQPNSGMVDSVTNLHYDNMLDAQIDAVYAAIKAMGHTD---VEVRISETGWPS 271
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Match: A0A565BXA4_9BRAS (Glucan endo-1,3-beta-D-glucosidase n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565BXA4_9BRAS) HSP 1 Score: 108 bits (269), Expect = 1.090e-24 Identity = 63/181 (34.81%), Postives = 99/181 (54.70%), Query Frame = 1
Query: 52 KRWVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIERFGARLAPCLREVYDALLGTGLANRVKLVTPLNMSVLGGSYPPSTGHFAGAKIAIVTEVVRLLVKIGSPFCVNIYPFHA----RHDASRDFVLFGPDAGYVDGDNLRYCDMFSAQYDAVVSALSKLGVAGADTMELVVTETGWPT 582
++WV+ N+ VD D K + +VG E + +F L P + + A+LG GL ++K+ T ++M VL SYPPS+G F G + ++ ++R LV SP +N+Y + + R D+ LF G V Y ++F A DAV SAL + +G +++E+VV+ETGWPT
Sbjct: 96 EKWVQTNVISYVD---DVKFRYVSVGNEVKISDSYSQF---LVPAMENIDRAILGAGLDGQIKVSTAVDMGVLEKSYPPSSGSFTGKVMVLMEPIIRFLVNKKSPLHLNLYTYFSYAGNRDQIGLDYALFTASPGTVSDPPRSYQNLFDAMLDAVYSALER---SGGESLEVVVSETGWPT 267 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig162375.3963.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig162375.3963.1 >prot_H-elongata_contig162375.3963.1 ID=prot_H-elongata_contig162375.3963.1|Name=mRNA_H-elongata_contig162375.3963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=198bp MVYANNDAMMSIKRWKRWVEQNIRPIVDGLPDSKEIFFAVGYESLAPWNIback to top mRNA from alignment at H-elongata_contig162375:769..1368+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig162375.3963.1 ID=mRNA_H-elongata_contig162375.3963.1|Name=mRNA_H-elongata_contig162375.3963.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=600bp|location=Sequence derived from alignment at H-elongata_contig162375:769..1368+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig162375:769..1368+ >mRNA_H-elongata_contig162375.3963.1 ID=mRNA_H-elongata_contig162375.3963.1|Name=mRNA_H-elongata_contig162375.3963.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1188bp|location=Sequence derived from alignment at H-elongata_contig162375:769..1368+ (Himanthalia elongata Himel1 dioecious)back to top |