prot_H-elongata_contig16237.3962.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16237.3962.1
Unique Nameprot_H-elongata_contig16237.3962.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length121
Homology
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: D8LEA1_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEA1_ECTSI)

HSP 1 Score: 209 bits (531), Expect = 9.360e-65
Identity = 100/108 (92.59%), Postives = 105/108 (97.22%), Query Frame = 0
Query:   11 SANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFSDCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQ 118
            SANTRLMRDLSRLMRSDT+KLGFSLQLKNDDAL+EW+INLFGFSDCPLAEDMK+L KEK LDHVRLMMKFKDDYPF+PPFV IVYPRFKRSTGYIIDGAFCMELLTNQ
Sbjct:  187 SANTRLMRDLSRLMRSDTKKLGFSLQLKNDDALHEWNINLFGFSDCPLAEDMKRLEKEKHLDHVRLMMKFKDDYPFSPPFVHIVYPRFKRSTGYIIDGAFCMELLTNQ 294          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A835ZBS4_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBS4_9STRA)

HSP 1 Score: 162 bits (409), Expect = 6.670e-47
Identity = 73/107 (68.22%), Postives = 89/107 (83.18%), Query Frame = 0
Query:   12 ANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFSDCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQ 118
            ANTRLMRDLSRLMR+DT  LGF+L+L +DD L  W + +FGF+DCPLAEDM KL KE++L+H+ L MKF +DYP++PPF R+VYPRF R TGYI+DGAFC ELLT Q
Sbjct:  150 ANTRLMRDLSRLMRTDTSSLGFTLELVHDDNLTLWRVKVFGFTDCPLAEDMVKLKKERKLEHIELEMKFPEDYPYSPPFCRVVYPRFIRQTGYILDGAFCFELLTKQ 256          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A7S3XWH9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XWH9_HETAK)

HSP 1 Score: 130 bits (326), Expect = 6.470e-35
Identity = 59/108 (54.63%), Postives = 82/108 (75.93%), Query Frame = 0
Query:   11 SANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFSDCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYI-IDGAFCMELLTN 117
            + N RLM DL+++MR+DT  LGFSL+ KN+D+++ W   LF F DC LA+D+ +L + K +D V L ++FK DYPF+PPF+R+VYPRFK  TG++ I G+ CMELLTN
Sbjct:  105 AGNKRLMTDLAKIMRTDTTGLGFSLEPKNEDSMDRWVCKLFNFEDCALAQDLVQLKERKDIDFVELELQFKSDYPFSPPFIRVVYPRFKFHTGHVTIGGSICMELLTN 212          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: B8C5U5_THAPS (UBC core domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C5U5_THAPS)

HSP 1 Score: 114 bits (285), Expect = 3.150e-27
Identity = 57/122 (46.72%), Postives = 80/122 (65.57%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL      +    RL  DL ++M +DT++ GFSL+  ++D++++W I LFGF  D  LA+D+  +     +DHV L M F DDYPF PPFVR+V PRFKR TG++++GA CMELLT    N
Sbjct:  311 MSLRAEKESKGGRRRLASDLYKIMMADTDEAGFSLEPCDEDSMDKWCIKLFGFDCDSHLAKDLMVVG----MDHVELEMSFPDDYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTKDGWN 428          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A448Z8A8_9STRA (UBC core domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z8A8_9STRA)

HSP 1 Score: 113 bits (282), Expect = 5.320e-27
Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL        +  RL +DL R+M  DTE+ GFSL  + +D++ +W+I LF F  D  LA+DM  +     +DH++L MKF + YPF PPFVR+V PRFKR TG++++GA CMELLT    N
Sbjct:  256 MSLRAQQETSGSKRRLAQDLYRIMNQDTEEAGFSLAPQTEDSMEKWTIKLFQFDPDSNLAKDMLVVG----IDHIKLEMKFPEQYPFEPPFVRVVNPRFKRQTGFVMNGALCMELLTKDGWN 373          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A1Z5K8B1_FISSO (Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8B1_FISSO)

HSP 1 Score: 110 bits (276), Expect = 9.360e-27
Identity = 56/108 (51.85%), Postives = 70/108 (64.81%), Query Frame = 0
Query:   15 RLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            RL +DL R+M  DT + GFSL    +D++  W+I LF F  D  LA+DMK L     +DH+ L M F D YPF PPFVR+V PRFKR TG+++ GA CMELLT    N
Sbjct:  159 RLAQDLYRIMNQDTSEAGFSLHPTAEDSMKHWTIELFQFDPDSNLAKDMKVLG----IDHIELEMTFPDQYPFEPPFVRVVKPRFKRQTGFVMSGALCMELLTKDGWN 262          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A7S1ZF53_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZF53_TRICV)

HSP 1 Score: 108 bits (271), Expect = 9.750e-27
Identity = 54/122 (44.26%), Postives = 79/122 (64.75%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL        +  RL  DL ++M +DT++ GF ++ K++D+L+ WS+ LF F  D  L++D+  L     +D V L M F D YPF PPFVR+V PRFKR TG++++GA CMELLT++  N
Sbjct:    1 MSLRAESEKTGSKRRLAADLYKIMMADTDEAGFKIEPKSEDSLDRWSVRLFAFDEDSNLSKDLAVLG----IDAVELEMSFPDQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTSEGWN 118          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: B7G7I5_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G7I5_PHATC)

HSP 1 Score: 110 bits (276), Expect = 4.630e-26
Identity = 57/122 (46.72%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL           RL +DL R+M  DT K GFSL+   +D++  W+I LF F  D  LA+DM  L     L+H+ L M F + YPF PPFVR+  PRFKR TG++++GA CMELLTN+  N
Sbjct:  278 MSLRAEKETSGGKRRLAQDLYRIMNQDTNKAGFSLKPSKEDSMERWTIKLFKFDEDSNLAKDMLVLG----LEHIELEMSFPEQYPFEPPFVRVSRPRFKRQTGFVMNGALCMELLTNEGWN 395          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: A0A7S3Q9L1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9L1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.290e-25
Identity = 54/122 (44.26%), Postives = 78/122 (63.93%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL           RL  DL ++M +DT++ GF+++  +D+ ++EW++ LF F  D  L +D+  L     LDHV L M F + YPF PPFVR+V PRFKR TG++++GA CMELLTN+  N
Sbjct:  301 MSLRAEREKSGGRRRLAADLYKVMMTDTQEAGFAVEQNDDECMDEWTVRLFKFDEDSDLHKDLLVLG----LDHVELKMNFPEQYPFEPPFVRVVRPRFKRQTGFVMNGALCMELLTNEGWN 418          
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Match: K0RZ81_THAOC (UBC core domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ81_THAOC)

HSP 1 Score: 109 bits (272), Expect = 1.300e-25
Identity = 56/122 (45.90%), Postives = 77/122 (63.11%), Query Frame = 0
Query:    1 LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINLFGFS-DCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKRSTGYIIDGAFCMELLTNQARN 121
            +SL           RL  DL ++M +DT++ GFSL+  ++D++++W INLFGF  D  LA+D+         D V L M F DDYPF PPFVR+V PRF+R TG+++ GA CMELLT+   N
Sbjct:  236 MSLRAEKEKTGGRRRLASDLYKIMMADTKEAGFSLEPVDEDSMDKWRINLFGFDEDSNLAKDLMVCGT----DSVELQMSFPDDYPFKPPFVRVVKPRFQRQTGFVMSGALCMELLTSDGWN 353          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16237.3962.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEA1_ECTSI9.360e-6592.59UBC core domain-containing protein n=2 Tax=Ectocar... [more]
A0A835ZBS4_9STRA6.670e-4768.22Ubiquitin-conjugating enzyme/RWD-like protein n=1 ... [more]
A0A7S3XWH9_HETAK6.470e-3554.63Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
B8C5U5_THAPS3.150e-2746.72UBC core domain-containing protein n=1 Tax=Thalass... [more]
A0A448Z8A8_9STRA5.320e-2746.72UBC core domain-containing protein n=1 Tax=Pseudo-... [more]
A0A1Z5K8B1_FISSO9.360e-2751.85Ubiquitin-conjugating enzyme E2 Q n=2 Tax=Fistulif... [more]
A0A7S1ZF53_TRICV9.750e-2744.26Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
B7G7I5_PHATC4.630e-2646.72Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q9L1_9STRA1.290e-2544.26Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
K0RZ81_THAOC1.300e-2545.90UBC core domain-containing protein n=1 Tax=Thalass... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 15..117
e-value: 1.4E-4
score: 21.5
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 14..121
score: 10.282
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 8..119
e-value: 1.6E-24
score: 88.4
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 11..118
NoneNo IPR availablePANTHERPTHR24068:SF72UBIQUITIN-CONJUGATING ENZYME E2Q-LIKE PROTEIN 1coord: 15..117
NoneNo IPR availablePANTHERPTHR24068FAMILY NOT NAMEDcoord: 15..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16237contigH-elongata_contig16237:450..1440 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16237.3962.1mRNA_H-elongata_contig16237.3962.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16237 450..1440 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16237.3962.1 ID=prot_H-elongata_contig16237.3962.1|Name=mRNA_H-elongata_contig16237.3962.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=121bp
LSLPVSLSPRSANTRLMRDLSRLMRSDTEKLGFSLQLKNDDALNEWSINL
FGFSDCPLAEDMKKLAKEKRLDHVRLMMKFKDDYPFTPPFVRIVYPRFKR
STGYIIDGAFCMELLTNQARN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD