prot_H-elongata_contig16232.3961.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16232.3961.1
Unique Nameprot_H-elongata_contig16232.3961.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length481
Homology
BLAST of mRNA_H-elongata_contig16232.3961.1 vs. uniprot
Match: D7G695_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G695_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 1.460e-57
Identity = 193/488 (39.55%), Postives = 247/488 (50.61%), Query Frame = 0
Query:    1 LQVVDTDEVVPGGVMVTPRPLIPKTNRLEAKRARLARWQEDPSLIAKDMAEQREAVSRAEEKDAMVEAEQEAWERWYLSLRAHLMARRRPTVSWSRTAEATASSDLSSPASSVNASTETPASAAGEIEVALEEANGRASAFNGGDDPDGGXXXXXXXXXXXXXXXVKGTGAA---GRGVAVWSCWGEEEEEEASMRELEQVVMKRAGLKGEFDMKKVVIDVHTDRGRQVMSARREHVALLAEQQQQQHSQKNTGKDEVKADGDLDAA--HPGDVALLRRWEELLRSTG-GGGRRAPNGINEAFHGAGIXXXXXXXXXXXXXXXRSRTTRASVESILKTKSASLLIPRGLDLPPSMRTPRYPALLLQQRXXXXXXXXKATIAGETSRNSSSAIDIE--IDGSKNKGGAMLALAERTARAMDMKGCIGDRVQWFPRGLPMEMAKPEGGYDELESAQYAAKISQAVYRLKGLMEETDKMQGEMELRRQQKV 480
            +QV+  +EV PG V  TPRP +PK N+LE KRAR+ARW++DPS + KDMA+QREA+ +AEE+D  +EAE++AWERWYL LRAHL A RRPT +WS             PA+                                       XXXXXXXXXXXXXXX   TG A   GR    +   GE       +R LE  VMKRAGL+G+FDM KV ++V     R  M AR+EH  L+A+QQ    ++        + +G+ + A  HPGD   LRRWEELLRS    GGR  P  I      A                 R+ ++R              L+P+GLDL PSMR PRY                  + +G T+ + + AI+    + GS + G  M       A  M   G + DRVQWFPRGLP E     G  DE ESA +  + S A+ RL   +EET K Q EME+RR++KV
Sbjct:  118 MQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEEEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWS-------------PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSTGKAVDNGR----FRTGGEXXXXXERVRGLEVEVMKRAGLEGKFDMTKV-LNVLAGCSRDAMFARQEHTTLVAKQQSGGDAKAGAKDGGAEHEGERNDASPHPGDEGSLRRWEELLRSAHVNGGRWRPGVIEGGVTNAPPGGTSTDTDDASGPTPRTASSRXXXXXXXXXXXREPLVPKGLDLLPSMRAPRY--------MLRPGEHADISGSGATAEDEAQAIEYVPWVVGSGSSGRVMAGHTGGAATPMPAAGGVNDRVQWFPRGLPKESVTGMG-QDERESALFNTRASMAIDRLGEQVEETSKRQAEMEIRRREKV 578          
BLAST of mRNA_H-elongata_contig16232.3961.1 vs. uniprot
Match: A0A6H5KJ15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ15_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 3.270e-53
Identity = 189/487 (38.81%), Postives = 242/487 (49.69%), Query Frame = 0
Query:    1 LQVVDTDEVVPGGVMVTPRPLIPKTNRLEAKRARLARWQEDPSLIAKDMAEQREAVSRAEEKDAMVEAEQEAWERWYLSLRAHLMARRRPTVSWSRTAEATASSDLSSPASSVNASTETPASAAGEIEVALEEANGRASAFNGGDDPDGGXXXXXXXXXXXXXXXVKGTGAA---GRGVAVWSCWGEEEEEEASMRELEQVVMKRAGLKGEFDMKKVVIDVHTDRGRQVMSARREHVALLAEQQQQQHSQKNTGKDEVKADGDLDAA--HPGDVALLRRWEELLRSTGGGGRRAPNGINEAFHGAGIXXXXXXXXXXXXXXXRSRTTRASVESILKTKSASLLIPRGLDLPPSMRTPRYPALLLQQRXXXXXXXXKATIAGETSRNSSSAIDIE--IDGSKNKGGAMLALAERTARAMDMKGCIGDRVQWFPRGLPMEMAKPEGGYDELESAQYAAKISQAVYRLKGLMEETDKMQGEMELRRQQKV 480
            +QV+  +EV PG V  TPRP +PK N+LE KRAR+ARW++DPS I KDMA+QREA+ +AE++D  +EAE+ AWERWYL LRAHL A RRPT +WS  A                                                    XXXXXXXXXXXXXXX  GTG A   GR           E     +R  E  VMKRAGL+G+FDM KV ++V     R  MSAR+EH  L+A+QQ    S+        + +G+ D A  HPGD   LRRWEELLRS    G R   G+ E                          +    +   + +    L+P+GLDL PSMR PRY                  + +G T+++ + AI+    + GS + G  M       A  M   G + DRVQWFPRGLP E     G  D+ ESA +  + S A+ RL   +EET K Q EME+RR++KV
Sbjct:  101 MQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEIEKDMAKQREALKKAEKEDEQLEAERHAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXX------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGTGKAVNDGRYRXXXXXXXXXER----VRGFEAEVMKRAGLEGKFDMTKV-LNVLAGCSRDAMSARQEHTTLIAKQQSGGDSKAGAEGGGAEHEGERDEALPHPGDEGSLRRWEELLRSAHVHGVRWRPGVIEGGLTNAPPRGTLTDTDDASGPTPGTASLRGGDRQQQQQQREPLVPKGLDLLPSMRAPRY--------MPRPGEHVDISGSGATAKDGAQAIEYVPWVVGSGSSGRVMAGHTGGAAAPMLAAGGVNDRVQWFPRGLPKESVTGMG-QDQRESALFNTRASMAIDRLGEQVEETSKRQAEMEIRRREKV 567          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16232.3961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G695_ECTSI1.460e-5739.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJ15_9PHAE3.270e-5338.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16232contigH-elongata_contig16232:242..4390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16232.3961.1mRNA_H-elongata_contig16232.3961.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16232 242..4390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16232.3961.1 ID=prot_H-elongata_contig16232.3961.1|Name=mRNA_H-elongata_contig16232.3961.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=481bp
LQVVDTDEVVPGGVMVTPRPLIPKTNRLEAKRARLARWQEDPSLIAKDMA
EQREAVSRAEEKDAMVEAEQEAWERWYLSLRAHLMARRRPTVSWSRTAEA
TASSDLSSPASSVNASTETPASAAGEIEVALEEANGRASAFNGGDDPDGG
NGNGSQSREGKGEGDVKGTGAAGRGVAVWSCWGEEEEEEASMRELEQVVM
KRAGLKGEFDMKKVVIDVHTDRGRQVMSARREHVALLAEQQQQQHSQKNT
GKDEVKADGDLDAAHPGDVALLRRWEELLRSTGGGGRRAPNGINEAFHGA
GIVLSSWSSSRRSGGGGRSRTTRASVESILKTKSASLLIPRGLDLPPSMR
TPRYPALLLQQRQEQNQQQQKATIAGETSRNSSSAIDIEIDGSKNKGGAM
LALAERTARAMDMKGCIGDRVQWFPRGLPMEMAKPEGGYDELESAQYAAK
ISQAVYRLKGLMEETDKMQGEMELRRQQKV*
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