prot_H-elongata_contig16217.3954.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16217.3954.1
Unique Nameprot_H-elongata_contig16217.3954.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length103
Homology
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: D8LHD8_ECTSI (Eukaryotic translation initiation factor 2B beta subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHD8_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 3.940e-51
Identity = 84/99 (84.85%), Postives = 92/99 (92.93%), Query Frame = 0
Query:    1 MDVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLS 99
            MDVR WL QWPRVL+QL+ LVVGL RRQVSG YNCAQFTVELYRNLVG+ KWGTAGQLMDAVRE+GKEL++AKPSEL+VGNMVRRVLYIIRDEYES+ S
Sbjct:   55 MDVRAWLQQWPRVLSQLETLVVGLKRRQVSGPYNCAQFTVELYRNLVGSCKWGTAGQLMDAVREVGKELVAAKPSELAVGNMVRRVLYIIRDEYESAFS 153          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A836CBW3_9STRA (Eukaryotic translation initiation factor 2B beta subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBW3_9STRA)

HSP 1 Score: 124 bits (312), Expect = 4.950e-32
Identity = 59/98 (60.20%), Postives = 78/98 (79.59%), Query Frame = 0
Query:    1 MDVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSL 98
            + VRT+L  WP VL+Q++ L V L RRQVSG Y+CA+ T+EL R  VGT KW TA QLM+ +R +G+ELI+AKPSEL+VGN+VRRVL++IR+EY + L
Sbjct:   23 VGVRTFLKNWPIVLSQMEKLSVSLKRRQVSGPYHCAKATLELLRYTVGTCKWATAAQLMELIRAVGRELIAAKPSELAVGNVVRRVLFVIREEYTAKL 120          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A3R6WSI2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R6WSI2_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.290e-26
Identity = 48/101 (47.52%), Postives = 75/101 (74.26%), Query Frame = 0
Query:    3 VRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSGLNA 103
            ++ WLA WP++  QL  L+VGL RRQ++G+Y  ++ T EL R ++GT +W  A QLMD +R +G+ LI A P EL++GN++RRVL+IIR+EY +++  L++
Sbjct:    6 LKQWLAPWPKISAQLSNLLVGLKRRQITGSYETSRKTTELVRAILGTVRWTHARQLMDNIRLLGRVLIKAIPQELAIGNVIRRVLFIIREEYLNAMKTLSS 106          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A024U0L0_9STRA (Uncharacterized protein n=10 Tax=Aphanomyces TaxID=100860 RepID=A0A024U0L0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.750e-26
Identity = 49/101 (48.51%), Postives = 76/101 (75.25%), Query Frame = 0
Query:    3 VRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSGLNA 103
            ++ WLA WP++ TQL  L+VGL RRQ++G+Y  ++ T EL R ++GT +W  A QLMD +R +G+ LI A P EL++GN++RRVL+IIR+EY +++  L++
Sbjct:    6 LKQWLAPWPKISTQLSNLLVGLKRRQITGSYETSRKTTELVRAILGTVRWTHARQLMDNIRLLGRVLIKAIPQELAIGNVIRRVLFIIREEYLNAMKTLSS 106          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A1V9YTY4_9STRA (Translation initiation factor eIF-2B beta subunit n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YTY4_9STRA)

HSP 1 Score: 105 bits (262), Expect = 5.060e-25
Identity = 46/101 (45.54%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 VRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSGLNA 103
            ++ WLA WP+++ Q   LVVGL RRQ++G+Y  ++ T EL R ++G  +W  A QLM+ VR +G+ L+ A P EL++GN++RRVL+IIR+EY + +  L++
Sbjct:    7 LQQWLAPWPKIVEQYKQLVVGLKRRQITGSYETSRKTTELLRAVLGAVRWAHARQLMENVRMLGRVLVKAMPQELAIGNVIRRVLFIIREEYLNGMKALSS 107          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: W7TWQ5_9STRA (Translation initiation factor eif-2b subunit beta n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWQ5_9STRA)

HSP 1 Score: 102 bits (255), Expect = 5.720e-24
Identity = 45/102 (44.12%), Postives = 72/102 (70.59%), Query Frame = 0
Query:    2 DVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSGLNA 103
            D+  WL+ WP V  Q  +L+  L RR+V+G+  CA+ T+EL + ++GT +W TA +LM  V+ +GK L+ A+P +L VGN+VRR+L+IIR+E+++ L  + A
Sbjct:   11 DLDAWLSTWPHVHGQYRSLITSLQRRKVAGSLPCAKMTIELLKAVMGTCRWTTAAELMSVVKRVGKALVDAQPLQLVVGNVVRRILFIIREEHKNKLREVRA 112          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: K3WDK5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDK5_GLOUD)

HSP 1 Score: 102 bits (255), Expect = 6.320e-24
Identity = 46/97 (47.42%), Postives = 71/97 (73.20%), Query Frame = 0
Query:    2 DVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSL 98
            +++ WLA+WP V   ++ALV+ L RRQV+G+Y+ A+ T  L   ++ T +W TAG++M+ VR++G  L  A   EL++GN+VRRVLYIIR+EY ++L
Sbjct:    5 ELKEWLAEWPSVRESVEALVLSLKRRQVTGSYDTAKKTTMLLNKVIETVEWSTAGEIMEKVRQLGHMLTKAHSHELAIGNVVRRVLYIIREEYVNAL 101          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A8K1FND4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FND4_PYTOL)

HSP 1 Score: 100 bits (250), Expect = 3.120e-23
Identity = 46/96 (47.92%), Postives = 69/96 (71.88%), Query Frame = 0
Query:    3 VRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSL 98
            V+ WL  WP V   +D LV+ L RRQ++G+Y+ A+ T+ L+ +++ T KW TA ++MD VR +G  L  A P EL++GN+VRRVLYIIR+E+ ++L
Sbjct:    6 VQPWLRDWPSVQANVDDLVLSLKRRQLAGSYDTAKRTIMLFSHMLETVKWSTASEIMDKVRGLGHMLTRAHPHELAIGNVVRRVLYIIREEHANAL 101          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A6G0WLN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WLN6_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.810e-23
Identity = 45/101 (44.55%), Postives = 73/101 (72.28%), Query Frame = 0
Query:    3 VRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSGLNA 103
            ++ WLA WP++   L  L++GL RRQ++G+Y  ++ T EL R ++G  +W  A QLM+ VR +G+ LI A P EL++GN++RRVL+IIR+EY +++  L++
Sbjct:    6 LKQWLAPWPKINDLLSTLLLGLKRRQITGSYETSRKTTELLRAILGAVRWPHARQLMEHVRLLGRVLIKAIPQELAIGNVIRRVLFIIREEYLNAIKTLSS 106          
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Match: A0A5D6XPM2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPM2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 9.220e-21
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 0
Query:    2 DVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTSKWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSL 98
            ++++WLA+ P V   +D LV+ L RRQ++G+Y+ A+ T  L   ++ T +W TAG++M+ VR++G  L  A   EL++GN+VRRVLYIIR+EY  +L
Sbjct:    3 ELQSWLAERPAVRASVDDLVLSLKRRQLTGSYDTAKKTTMLLSRVIETVEWTTAGEIMEKVRQLGHMLTKAHSRELAIGNVVRRVLYIIREEYLGAL 99          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16217.3954.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHD8_ECTSI3.940e-5184.85Eukaryotic translation initiation factor 2B beta s... [more]
A0A836CBW3_9STRA4.950e-3260.20Eukaryotic translation initiation factor 2B beta s... [more]
A0A3R6WSI2_9STRA1.290e-2647.52Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A024U0L0_9STRA1.750e-2648.51Uncharacterized protein n=10 Tax=Aphanomyces TaxID... [more]
A0A1V9YTY4_9STRA5.060e-2545.54Translation initiation factor eIF-2B beta subunit ... [more]
W7TWQ5_9STRA5.720e-2444.12Translation initiation factor eif-2b subunit beta ... [more]
K3WDK5_GLOUD6.320e-2447.42Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A8K1FND4_PYTOL3.120e-2347.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0WLN6_9STRA3.810e-2344.55Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A5D6XPM2_9STRA9.220e-2145.36Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000649Initiation factor 2B-relatedPFAMPF01008IF-2Bcoord: 28..92
e-value: 1.8E-6
score: 27.4
NoneNo IPR availablePANTHERPTHR45859FAMILY NOT NAMEDcoord: 15..98
IPR037171NagB/RpiA transferase-likeSUPERFAMILY100950NagB/RpiA/CoA transferase-likecoord: 12..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16217contigH-elongata_contig16217:6395..7533 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16217.3954.1mRNA_H-elongata_contig16217.3954.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16217 6395..7533 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16217.3954.1 ID=prot_H-elongata_contig16217.3954.1|Name=mRNA_H-elongata_contig16217.3954.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=103bp
MDVRTWLAQWPRVLTQLDALVVGLNRRQVSGAYNCAQFTVELYRNLVGTS
KWGTAGQLMDAVREMGKELISAKPSELSVGNMVRRVLYIIRDEYESSLSG
LNA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000649IF-2B-related
IPR037171NagB/RpiA_transferase-like