mRNA_H-elongata_contig161980.3946.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig161980.3946.1
Unique NamemRNA_H-elongata_contig161980.3946.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: D7FIW9_ECTSI (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIW9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 1.150e-16
Identity = 35/35 (100.00%), Postives = 35/35 (100.00%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG
Sbjct:   90 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 124
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: A0A7S3UNW4_HETAK (Glycylpeptide N-tetradecanoyltransferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNW4_HETAK)

HSP 1 Score: 73.9 bits (180), Expect = 8.980e-16
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            EVYTLL+ENYVEDDDNMFRFDYS  FLRWALTPPG
Sbjct:    5 EVYTLLTENYVEDDDNMFRFDYSVPFLRWALTPPG 39
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: A0A0S7GZH8_9TELE (Glycylpeptide N-tetradecanoyltransferase (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GZH8_9TELE)

HSP 1 Score: 70.1 bits (170), Expect = 2.240e-14
Identity = 29/35 (82.86%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ENYVEDDDNMFRFDYS  FL+WAL PPG
Sbjct:   66 ELYTLLNENYVEDDDNMFRFDYSPNFLKWALRPPG 100
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: V4AVX6_LOTGI (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4AVX6_LOTGI)

HSP 1 Score: 73.6 bits (179), Expect = 2.700e-14
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ENYVEDDDNMFRFDYS EFLRWAL PPG
Sbjct:   92 ELYTLLNENYVEDDDNMFRFDYSSEFLRWALMPPG 126
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: A0A8C1EA29_CYPCA (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C1EA29_CYPCA)

HSP 1 Score: 70.5 bits (171), Expect = 3.000e-14
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ENYVEDDDNMFRFDYS EFL WAL PPG
Sbjct:   95 ELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPG 129
[Close]
BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: A0A7S2Z516_9CHLO (Glycylpeptide N-tetradecanoyltransferase (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z516_9CHLO)

HSP 1 Score: 71.2 bits (173), Expect = 3.220e-14
Identity = 31/35 (88.57%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            EVYTLLSENYVEDDDNMFRF+YS EFL WAL PPG
Sbjct:  142 EVYTLLSENYVEDDDNMFRFNYSAEFLSWALQPPG 176
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BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: G0QW95_ICHMG (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ichthyophthirius multifiliis (strain G5) TaxID=857967 RepID=G0QW95_ICHMG)

HSP 1 Score: 73.2 bits (178), Expect = 3.590e-14
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            ++YTLL ENYVEDDDNMFRFDYS+EFL+WALTPPG
Sbjct:  112 QLYTLLVENYVEDDDNMFRFDYSREFLKWALTPPG 146
[Close]
BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: UPI00142582C0 (glycylpeptide N-tetradecanoyltransferase 2-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142582C0)

HSP 1 Score: 73.2 bits (178), Expect = 3.690e-14
Identity = 31/35 (88.57%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ NYVEDDDNMFRFDYSKEFL WALTPPG
Sbjct:  166 ELYTLLANNYVEDDDNMFRFDYSKEFLLWALTPPG 200
[Close]
BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: B7FLU0_MEDTR (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Medicago truncatula TaxID=3880 RepID=B7FLU0_MEDTR)

HSP 1 Score: 70.9 bits (172), Expect = 4.220e-14
Identity = 29/35 (82.86%), Postives = 33/35 (94.29%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ NYVEDD+NMFRF+YSKEFLRWAL PPG
Sbjct:  107 EIYTLLANNYVEDDENMFRFNYSKEFLRWALQPPG 141
[Close]
BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Match: A0A671KNT2_9TELE (Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671KNT2_9TELE)

HSP 1 Score: 70.5 bits (171), Expect = 4.370e-14
Identity = 30/35 (85.71%), Postives = 32/35 (91.43%), Query Frame = 1 
Query:    1 EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG 105
            E+YTLL+ENYVEDDDNMFRFDYS EFL WAL PPG
Sbjct:  114 ELYTLLNENYVEDDDNMFRFDYSPEFLLWALRPPG 148
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161980.3946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIW9_ECTSI1.150e-16100.00Glycylpeptide N-tetradecanoyltransferase n=1 Tax=E... [more]
A0A7S3UNW4_HETAK8.980e-1691.43Glycylpeptide N-tetradecanoyltransferase (Fragment... [more]
A0A0S7GZH8_9TELE2.240e-1482.86Glycylpeptide N-tetradecanoyltransferase (Fragment... [more]
V4AVX6_LOTGI2.700e-1488.57Glycylpeptide N-tetradecanoyltransferase n=1 Tax=L... [more]
A0A8C1EA29_CYPCA3.000e-1485.71Glycylpeptide N-tetradecanoyltransferase n=1 Tax=C... [more]
A0A7S2Z516_9CHLO3.220e-1488.57Glycylpeptide N-tetradecanoyltransferase (Fragment... [more]
G0QW95_ICHMG3.590e-1485.71Glycylpeptide N-tetradecanoyltransferase n=1 Tax=I... [more]
UPI00142582C03.690e-1488.57glycylpeptide N-tetradecanoyltransferase 2-like n=... [more]
B7FLU0_MEDTR4.220e-1482.86Glycylpeptide N-tetradecanoyltransferase n=1 Tax=M... [more]
A0A671KNT2_9TELE4.370e-1485.71Glycylpeptide N-tetradecanoyltransferase n=1 Tax=S... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig161980contigH-elongata_contig161980:977..1081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score79.3
Seed ortholog evalue3.9e-13
Seed eggNOG ortholog2880.D7FIW9
Preferred nameNMT1
KEGG koko:K00671,ko:K02218
KEGG Pathwayko04011,ko04392,map04011,map04392
GOsGO:0003674,GO:0003824,GO:0004379,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006464,GO:0006497,GO:0006498,GO:0006499,GO:0006807,GO:0006810,GO:0006839,GO:0006996,GO:0007005,GO:0007006,GO:0007275,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009966,GO:0009967,GO:0009987,GO:0010016,GO:0010064,GO:0010638,GO:0010646,GO:0010647,GO:0010821,GO:0010822,GO:0010941,GO:0010942,GO:0016020,GO:0016043,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018008,GO:0018193,GO:0018201,GO:0018377,GO:0019107,GO:0019538,GO:0019898,GO:0022400,GO:0023051,GO:0023056,GO:0031365,GO:0032101,GO:0032501,GO:0032502,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0034645,GO:0036211,GO:0040007,GO:0042157,GO:0042158,GO:0042180,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0046902,GO:0048367,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0060341,GO:0061024,GO:0065007,GO:0065008,GO:0070201,GO:0071704,GO:0071840,GO:0071944,GO:0090559,GO:1900739,GO:1900740,GO:1901028,GO:1901030,GO:1901564,GO:1901566,GO:1901576,GO:1903747,GO:1903749,GO:1903827,GO:1903829,GO:1904951,GO:1905475,GO:1905477,GO:1990904,GO:2001233,GO:2001235
EggNOG free text desc.Adds a myristoyl group to the N-terminal glycine residue of certain cellular proteins
EggNOG OGsCOG5092@1,KOG2779@2759
Ec32 ortholog descriptionAcyl-CoA N-acyltransferase
Ec32 orthologEc-07_007870.1
EC2.3.1.97,2.7.11.1
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01001
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Model size105
Cds size105
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929948.8480942-CDS-H-elongata_contig161980:976..10811622929948.8480942-CDS-H-elongata_contig161980:976..1081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig161980 977..1081 -
1691679219.732107-CDS-H-elongata_contig161980:976..10811691679219.732107-CDS-H-elongata_contig161980:976..1081Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig161980 977..1081 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig161980.3946.1prot_H-elongata_contig161980.3946.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig161980 977..1081 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig161980.3946.1

>prot_H-elongata_contig161980.3946.1 ID=prot_H-elongata_contig161980.3946.1|Name=mRNA_H-elongata_contig161980.3946.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=35bp
EVYTLLSENYVEDDDNMFRFDYSKEFLRWALTPPG
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mRNA from alignment at H-elongata_contig161980:977..1081-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig161980.3946.1 ID=mRNA_H-elongata_contig161980.3946.1|Name=mRNA_H-elongata_contig161980.3946.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=105bp|location=Sequence derived from alignment at H-elongata_contig161980:977..1081- (Himanthalia elongata Himel1 dioecious)
GAAGTTTACACCCTTCTTTCCGAGAACTATGTTGAAGACGACGACAACAT
GTTCCGCTTCGACTACTCCAAGGAGTTCCTACGATGGGCGTTAACCCCCC
CGGGT
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Coding sequence (CDS) from alignment at H-elongata_contig161980:977..1081-

>mRNA_H-elongata_contig161980.3946.1 ID=mRNA_H-elongata_contig161980.3946.1|Name=mRNA_H-elongata_contig161980.3946.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=210bp|location=Sequence derived from alignment at H-elongata_contig161980:977..1081- (Himanthalia elongata Himel1 dioecious)
GAAGTTTACACCCTTCTTTCCGAGAACTATGTTGAAGACGACGACAACAT
GTTCCGCTTCGACTACTCCAAGGAGTTCCTACGATGGGCGTTAACCCCCC
CGGGTGAAGTTTACACCCTTCTTTCCGAGAACTATGTTGAAGACGACGAC
AACATGTTCCGCTTCGACTACTCCAAGGAGTTCCTACGATGGGCGTTAAC
CCCCCCGGGT
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