mRNA_H-elongata_contig16193.3944.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: Q3V799_SCYLO (41 kDa flavoprotein n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=Q3V799_SCYLO) HSP 1 Score: 422 bits (1085), Expect = 1.030e-145 Identity = 202/285 (70.88%), Postives = 229/285 (80.35%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIGKCYDAIAFARAFLANPDLPA 855
+GLII+EATQ S DGQGYPLTPGVFT EQIAGWKKITDAVHAKG K+ CQ+WHCGR SHESYQP G+APPAPSAI G TM GPKPFP+PREMTV EIK VEQFRQG LN + AGFDGVEIH NGYLIDQFLK +SNKRTDDYGGSLENRFRFL+EIV I GKD + V LTPGGT+ D+ E AT N E++ KQL+ M I++LHIKL+DDQDERHGG +P+E IR F G++I NNR+ EKEDFGEGD+GK YDA+AF R+F+ANPDLPA
Sbjct: 54 AGLIISEATQVSTDGQGYPLTPGVFTPEQIAGWKKITDAVHAKGAKMVCQIWHCGRTSHESYQPDGKAPPAPSAIACPDGECFTMEGPKPFPVPREMTVEEIKNCVEQFRQGALNSIEAGFDGVEIHAGNGYLIDQFLKDNSNKRTDDYGGSLENRFRFLKEIVVACQEAI--GKDKVAVHLTPGGTFNGTKDKAEEATGNHEYFCKQLNGMGISYLHIKLADDQDERHGGVAIPIETIRKNFDGIIITNNRYHEKEDFGEGDLGKVYDAVAFGRSFIANPDLPA 336
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: A0A6H5L5P0_9PHAE (Oxidored_FMN domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5P0_9PHAE) HSP 1 Score: 422 bits (1085), Expect = 1.070e-145 Identity = 200/284 (70.42%), Postives = 229/284 (80.63%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIGKCYDAIAFARAFLANPDLP 852
+G+II EATQ S+DGQGYPLTPG++T EQIAGWKKIT AVHAKG K+ CQLWHCGR+SHESYQP GRAP APSA+ G TM GPKPFP+PREMT+ +IKT VEQFRQG LN M AGFDG+EIH ANGYLIDQFLK SSNKRTDDYGGSLENRFR L+EI+ I GKD + VRLTPGGT+ DE E AT N E++ +QL M + +LH+KL+DDQD RHGGK+VP+E IR F GVLI NNR+DEK+DFGEGD+GK YDA+AF RAFLANPDLP
Sbjct: 55 AGMIIAEATQVSNDGQGYPLTPGIYTPEQIAGWKKITAAVHAKGAKMVCQLWHCGRISHESYQPEGRAPLAPSALACPAGECMTMEGPKPFPVPREMTIEDIKTCVEQFRQGALNVMEAGFDGLEIHAANGYLIDQFLKDSSNKRTDDYGGSLENRFRLLKEILTACQEAI--GKDKVAVRLTPGGTFNATKDEAEEATGNHEYFCRQLSGMGLMYLHVKLADDQDVRHGGKVVPIETIRKAFDGVLITNNRYDEKDDFGEGDLGKSYDAVAFGRAFLANPDLP 336
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: K9PN47_9CYAN (12-oxophytodienoate reductase n=1 Tax=Calothrix sp. PCC 7507 TaxID=99598 RepID=K9PN47_9CYAN) HSP 1 Score: 282 bits (721), Expect = 1.690e-90 Identity = 143/285 (50.18%), Postives = 186/285 (65.26%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIG-KCYDAIAFARAFLANPDLP 852
+GLII EATQ S GQGYP TPG+ + EQ+ GWK +TDAVH +G +IF QLWH GR+SH QP G P APSAI P GN ST GPKP+ PR + +SEI VEQ+RQG N + AGFDGVEIH ANGYL+DQFL+ +N+RTD+YGG++ENR R L E+ + T D +GVRL+P GT+ D D N + F + + L+ ++A+LHI + D D RHGG IVP IR ++G LI N + ++ G+ + K D +AF F++NPDLP
Sbjct: 52 AGLIIAEATQVSPQGQGYPFTPGIHSPEQVEGWKLVTDAVHQEGGRIFLQLWHVGRISHPDLQPNGELPVAPSAIAPH-GNASTFAGPKPYVTPRALEISEIPGIVEQYRQGAANALAAGFDGVEIHSANGYLLDQFLRDGTNQRTDEYGGTVENRVRLLLEVT--EAVTSVWDTDRVGVRLSPSGTFNDIRDS--NPLETFGYAAQALNRFNLAYLHIFEAVDADIRHGGTIVPTSHIRDRYTGTLIVNGGYTREK--GDAVLANKAADLVAFGTLFISNPDLP 329
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: B2IX00_NOSP7 (NADH:flavin oxidoreductase/NADH oxidase n=40 Tax=Nostocales TaxID=1161 RepID=B2IX00_NOSP7) HSP 1 Score: 280 bits (716), Expect = 9.620e-90 Identity = 144/285 (50.53%), Postives = 186/285 (65.26%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIG-KCYDAIAFARAFLANPDLP 852
+GLII+EATQ + +GQGYP TPG+ + EQ+ GWK ITDAVH +G +IF QLWH GR+SH QP G P APSAI P G +T GPKPF PR + SEI VEQ+RQG N + AGFDGVEIH ANGYLIDQFL+ +N+RTD YGGS+ENR RFL E+ + T + +GVRL+P GT+ D D N + F + + L+ ++A+LHI + + D RHGG IVP IR F+G LI N + ++ G+ + K D +AF F++NPDLP
Sbjct: 52 AGLIISEATQVTPEGQGYPATPGIHSPEQVEGWKLITDAVHQQGGRIFLQLWHVGRISHPDLQPNGALPVAPSAIAPK-GEAATYEGPKPFVTPRALETSEIPQIVEQYRQGAANALAAGFDGVEIHSANGYLIDQFLRDRTNQRTDKYGGSIENRTRFLLEVT--EAVTSVWDSNRVGVRLSPSGTFNDIGDS--NPLETFGYAAQALNQFNLAYLHIYEATEADIRHGGIIVPTSHIRDRFTGTLIVNGGYTREK--GDAVLANKAADLVAFGTLFISNPDLP 329
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: K9WLG2_9CYAN (NADH:flavin oxidoreductase n=3 Tax=Oscillatoriales TaxID=1150 RepID=K9WLG2_9CYAN) HSP 1 Score: 279 bits (714), Expect = 1.460e-89 Identity = 142/284 (50.00%), Postives = 184/284 (64.79%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIGKCYDAIAFARAFLANPDLP 852
+GLII EATQ S GQGYP TPG+ ++EQ+ GWK +TDAVH +G +IF QLWH GR+SH QP G P APSAI P G ST GPKPF PR + +EI +EQ+RQG N + AGFDGVE+HGANGYL+DQFL+ +N+RTD+YGGSLENR R L E+ + T G D +GVRL+P GT+ D D +T F + + L+ +A+LHI ++ D RHGG VP ++R F+G L+ N +D + G+ D ++F FLANPDLP
Sbjct: 50 AGLIIAEATQVSPQGQGYPSTPGIHSAEQVEGWKLVTDAVHQQGGRIFLQLWHVGRISHPDLQPDGALPVAPSAIAPK-GEASTYEGPKPFVTPRALETAEIPEIIEQYRQGAKNALQAGFDGVEVHGANGYLLDQFLRDGTNQRTDEYGGSLENRARLLLEVT--EAVTEVWGADRVGVRLSPSGTFNDMHDSDPLST--FSYATQALNRFGLAYLHIIEVNESDLRHGGTEVPTSVLRDRFTGTLMVNGGYDWERSNAVLAKGEA-DLVSFGTLFLANPDLP 327
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: A0A1Z4S5E5_9NOSO (NADH:flavin oxidoreductase/NADH oxidase n=3 Tax=Nostocaceae TaxID=1162 RepID=A0A1Z4S5E5_9NOSO) HSP 1 Score: 279 bits (714), Expect = 1.930e-89 Identity = 143/285 (50.18%), Postives = 184/285 (64.56%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRF-DEKEDFGEGDIGKCYDAIAFARAFLANPDLP 852
+GLII+EATQ + GQGYP TPG+ + EQ+AGWK +TDAVH +G +IF QLWH GR+SH QP G P APSAI P G ST GPKPF PR + SEI VEQ+RQG N + AGFDGVEIH ANGYL+DQFL+ +N+RTD YGGS+ENR R L E+ + T G +GVRL+P GT+ D D N + F + + L+ D+A+LHI + D D RHG +VP +R ++G +I N + DEK + + K D +AF F++NPDLP
Sbjct: 52 AGLIISEATQVAPTGQGYPQTPGIHSQEQVAGWKLVTDAVHQQGGRIFLQLWHVGRISHPDLQPNGELPVAPSAITPK-GEASTYEGPKPFVTPRPLETSEIPAIVEQYRQGAANALAAGFDGVEIHSANGYLLDQFLRDGTNQRTDKYGGSIENRARLLLEVT--EAVTSVWGAKQVGVRLSPSGTFNDMRDS--NPLETFGYVAQALNQFDLAYLHIFEAIDADIRHGTTVVPTSHLRDRYTGTIIVNGGYTDEKANTVLAN--KAADLVAFGTLFISNPDLP 329
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: A0A8J7AQ03_9CYAN (Alkene reductase n=4 Tax=Nostocales TaxID=1161 RepID=A0A8J7AQ03_9CYAN) HSP 1 Score: 278 bits (710), Expect = 7.510e-89 Identity = 142/285 (49.82%), Postives = 183/285 (64.21%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIGKCY-DAIAFARAFLANPDLP 852
+GL+I EATQ + GQGYPLTPG+ + EQ+AGW+ +TDAVH +G KIF QLWH GR+SH QP G P APSAI P G ST G KPF PR + SEI VEQ+RQG N + AGFDGVEIH ANGYLIDQFL++ +N+RTD YGG++ENR RFL E+ + T + +GVRL+P GT+ D D N + F + + L+ D+ +LH+ + D D RHGG IVP +R F+G LI N + + G + K D +AF F++NPDLP
Sbjct: 52 AGLMIAEATQVAPQGQGYPLTPGIHSPEQVAGWRLVTDAVHQEGGKIFLQLWHVGRISHPDLQPDGALPVAPSAITPQ-GQASTFEGSKPFVTPRALETSEIPEIVEQYRQGAANALAAGFDGVEIHAANGYLIDQFLRNGTNQRTDKYGGAIENRTRFLLEVT--EAVTSVWDSNRVGVRLSPSGTFNDMRDS--NPLETFGYAAQALNRFDLGYLHLFEATDADIRHGGTIVPTSHLRDRFTGTLIVNGGYTRER--GNAVLAKKEADLVAFGTLFISNPDLP 329
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: UPI00168592B7 (alkene reductase n=1 Tax=Nostoc parmelioides TaxID=1521621 RepID=UPI00168592B7) HSP 1 Score: 275 bits (703), Expect = 8.300e-88 Identity = 144/285 (50.53%), Postives = 187/285 (65.61%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIGKC-YDAIAFARAFLANPDLP 852
+GLI+TE +Q S G GYP TPG+ TSEQIAGW+ +TDAVH+ G +IF QLWH GR+SH S Q G P APSAI P+ GNVST G +PF PR + EI VEQFRQG N + AGFDGVEIHGA GYLIDQFL+ +N+RTDDYGGS+ENR RFL E+ + G + +G++L+P T+ D D A F + I L++ D+ +LH+ + D RHGGK +P+ R ++SG LIAN ++ ++ G+ I K D ++F FLANPDLP
Sbjct: 54 AGLIVTEGSQVSPQGFGYPGTPGIHTSEQIAGWRLVTDAVHSAGGRIFLQLWHTGRISHPSLQLDGGLPVAPSAIAPA-GNVSTYTGSQPFVTPRALETEEIPGVVEQFRQGAKNALEAGFDGVEIHGAFGYLIDQFLQDGANQRTDDYGGSIENRARFLLEVT--EAVCSVWGANRVGIKLSPSNTFNDIHDTDPKAL--FSYAITALNSFDLGYLHLMEASAADIRHGGKAIPVADFRPFYSGTLIANGGYNREK--GDAAIAKGDADLVSFGVLFLANPDLP 331
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: UPI00034DD8A2 (alkene reductase n=1 Tax=Synechococcus sp. PCC 7336 TaxID=195250 RepID=UPI00034DD8A2) HSP 1 Score: 275 bits (703), Expect = 8.560e-88 Identity = 140/287 (48.78%), Postives = 182/287 (63.41%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIAN---NRFDEKEDFGEGDIGKCYDAIAFARAFLANPDLP 852
+GLIITEATQ S G GYP TPG+ ++ Q+ GWK +TD V G IF QLWH GR+SH S QP G+ P APSAI PS G T G +PF PR + + EI VE +RQ N M AGF GVEIH ANGYL+DQFL+ +N+RTD YGG LENR R L E+ + T G D +GVRL+PGGT+ D +D AT F++ + L+ D+A+LHIK +D++D ++GG+ VP RT F+G ++ N NR E G + D +A+ + F+ANPDLP
Sbjct: 55 AGLIITEATQISPQGVGYPSTPGIHSAAQVEGWKLVTDTVRQAGGHIFLQLWHVGRISHPSLQPNGQLPVAPSAIAPSQGEAMTYQGMQPFVTPRALELDEIPGIVEDYRQAARNAMAAGFHGVEIHAANGYLLDQFLRDGTNRRTDRYGGPLENRTRLLLEVTQ--AVTEVWGGDRVGVRLSPGGTFSDMSDSNTLAT--FDYAVAALNPFDLAYLHIKEADEKDLKYGGEFVPASRYRTHFNGPIVTNCGYNRQTGNEAIASGGV----DLVAYGQLFIANPDLP 333
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Match: A0A1U7I371_9NOSO (Alkene reductase n=7 Tax=Nostoc TaxID=1177 RepID=A0A1U7I371_9NOSO) HSP 1 Score: 275 bits (703), Expect = 8.830e-88 Identity = 142/285 (49.82%), Postives = 183/285 (64.21%), Query Frame = 1
Query: 1 SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQLWHCGRVSHESYQPGGRAPPAPSAIPPSWGNVSTMNGPKPFPIPREMTVSEIKTTVEQFRQGVLNCMTAGFDGVEIHGANGYLIDQFLKSSSNKRTDDYGGSLENRFRFLREIVRWKFPTIFQGKDGLGVRLTPGGTYCDATDEPENATDNFEFYIKQLDAMDIAFLHIKLSDDQDERHGGKIVPMELIRTWFSGVLIANNRFDEKEDFGEGDIG-KCYDAIAFARAFLANPDLP 852
+GLII+EATQ + +GQGYP TPG+ + EQ+ GWK +TDAVH +G +IF QLWH GR+SH QPGG P APSAI + G ST GPKPF PR + SEI VEQ+RQ N + AGFDGVEIH ANGYLIDQFL+ +N+RTD YGGS+ENR RFL E+ + T + +GVR +P GT+ D D N + F + + L+ ++A+LHI + D D RHGG +VP IR F+ LI N + ++ G I K D +AF F++NPDLP
Sbjct: 52 AGLIISEATQVTPEGQGYPGTPGIHSPEQVEGWKLVTDAVHQQGGRIFLQLWHVGRISHPDLQPGGVLPVAPSAIA-AKGEASTFEGPKPFVTPRALETSEIPQVVEQYRQAAANALAAGFDGVEIHAANGYLIDQFLRDGTNQRTDKYGGSVENRTRFLLEVT--EAVTSVWDSNRVGVRFSPSGTFNDIRDS--NPLETFGYAAQALNQFNLAYLHIFEATDADIRHGGVVVPTSHIRDRFTNTLIVNGGYTREK--GNAVIANKAADLVAFGTLFISNPDLP 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16193.3944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig16193.3944.1 >prot_H-elongata_contig16193.3944.1 ID=prot_H-elongata_contig16193.3944.1|Name=mRNA_H-elongata_contig16193.3944.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=285bp SGLIITEATQFSDDGQGYPLTPGVFTSEQIAGWKKITDAVHAKGTKIFCQback to top mRNA from alignment at H-elongata_contig16193:4428..6940+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig16193.3944.1 ID=mRNA_H-elongata_contig16193.3944.1|Name=mRNA_H-elongata_contig16193.3944.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2513bp|location=Sequence derived from alignment at H-elongata_contig16193:4428..6940+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig16193:4428..6940+ >mRNA_H-elongata_contig16193.3944.1 ID=mRNA_H-elongata_contig16193.3944.1|Name=mRNA_H-elongata_contig16193.3944.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1710bp|location=Sequence derived from alignment at H-elongata_contig16193:4428..6940+ (Himanthalia elongata Himel1 dioecious)back to top |