prot_H-elongata_contig161714.3937.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig161714.3937.1
Unique Nameprot_H-elongata_contig161714.3937.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length108
Homology
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: D7FX13_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX13_ECTSI)

HSP 1 Score: 159 bits (402), Expect = 6.270e-47
Identity = 73/95 (76.84%), Postives = 86/95 (90.53%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPALLPGLPGGSVVYLLYAYILFAFATAAPKLYLHMLRQRKKQL 95
            RYPFYAL+IA MCPP L+W+RY+AF++LYPLGFA ELGTWIVGLPH+KA+GLP + PGLP GS +Y+LYAYI+FAFA  APKLY+HMLRQRKKQL
Sbjct:  135 RYPFYALNIAGMCPPVLQWLRYSAFVLLYPLGFAGELGTWIVGLPHIKAVGLPGV-PGLPEGSSIYVLYAYIVFAFAIGAPKLYMHMLRQRKKQL 228          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A835Z8Y0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.990e-23
Identity = 49/98 (50.00%), Postives = 68/98 (69.39%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPALLPGLPGGSVVYLLYAYILFAFATAAPKLYLHMLRQRKKQLAPP 98
            RYP+YA ++  +CP  L W+RY+AF++LYPLGFA+E+G ++V  PHMKA G    + GLP G    +L AY+LFA A  A  L+ +ML+ RK+QL  P
Sbjct:   89 RYPYYATNLLEICPDFLHWLRYSAFMLLYPLGFAAEVGCFVVAYPHMKA-GDKYRIEGLPEGGQFAVLGAYMLFAHAIGALTLFKYMLKARKRQLRQP 185          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A7S1B590_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B590_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.210e-14
Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPALLPGLPGGSVVYLLYAYILFAFATAAPKLYLHMLRQRKKQL 95
            RYPFYA S+   CP  L+W+RY+ FIV YPLGF SE+G  I      K          + G  + +L+ +Y+   +    P+LY +M RQR+K L
Sbjct:  119 RYPFYATSVGGFCPKFLQWLRYSQFIVFYPLGFVSEIGVIIAATIKKKQ--------NMFGIDIRWLIASYLFIIYGYYGPQLYWYMFRQRRKSL 205          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A6I8PHZ0_ORNAN (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=3 Tax=Monotremata TaxID=9255 RepID=A0A6I8PHZ0_ORNAN)

HSP 1 Score: 75.9 bits (185), Expect = 2.340e-14
Identity = 43/100 (43.00%), Postives = 57/100 (57.00%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPAL-LPGLPGGSVVYLLYAY-ILFAFATAAPKLYLHMLRQRKKQLAPP 98
            RY FY  S+    P  +KW RYT FI LYP+G   EL T    LP ++  GL ++ LP     S  Y  +   ++F++    P+LY HMLRQR+K LAPP
Sbjct:  150 RYSFYTFSLLDHLPYLIKWTRYTLFIALYPMGVTGELLTIYAALPFVRRAGLYSVSLPNKYNFSFDYHAFLILVMFSYIPLFPQLYFHMLRQRRKLLAPP 249          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: W5M3L3_LEPOC (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5M3L3_LEPOC)

HSP 1 Score: 75.5 bits (184), Expect = 3.060e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPAL-LPGLPGGSVVYLLYAYI-LFAFATAAPKLYLHMLRQRKKQLAPPREADKA 104
            RY FY  S+    P  +KW RYT FIVLYP+G   EL T    LP+++  G+ ++ LP     S  Y  +  + + ++    P+LY HMLRQRKK LAP     KA
Sbjct:  145 RYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVTGELLTIYAALPYVRETGMYSIRLPNKFNFSFDYYTFLILTMVSYIPLFPQLYFHMLRQRKKVLAPAEGYSKA 250          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: D9IVF2_STRIE (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=5 Tax=Echinacea TaxID=7674 RepID=D9IVF2_STRIE)

HSP 1 Score: 74.3 bits (181), Expect = 5.100e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPALLPGLPGGSVV----YLLYAYILFAFATAAPKLYLHMLRQRKK 93
            RY FY  ++    P  L W+RYT FIVLYP+G   EL T  + LP++K+ GL +L   LP    +    Y +  +++  +    P+LY HMLRQRKK
Sbjct:  112 RYAFYVFALLNRLPYVLMWLRYTLFIVLYPIGVTGELWTIYLALPYVKSTGLYSL--ELPNDYNISFDYYSVLIFLMILYIPIFPRLYSHMLRQRKK 206          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A7M7N2M7_STRPU (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7N2M7_STRPU)

HSP 1 Score: 74.3 bits (181), Expect = 5.980e-14
Identity = 40/97 (41.24%), Postives = 56/97 (57.73%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPALLPGLPGGSVV----YLLYAYILFAFATAAPKLYLHMLRQRKK 93
            RY FY  ++    P  L W+RYT FIVLYP+G   EL T  + LP++K+ GL +L   LP    +    Y +  +++  +    P+LY HMLRQRKK
Sbjct:  122 RYAFYVFALLNRLPYVLMWLRYTLFIVLYPIGVTGELWTIYLALPYVKSTGLYSL--ELPNDYNISFDYYSVLIFLMILYIPIFPRLYSHMLRQRKK 216          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A8J7TJ93_ATRSP (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Atractosteus spatula TaxID=7917 RepID=A0A8J7TJ93_ATRSP)

HSP 1 Score: 75.5 bits (184), Expect = 6.930e-14
Identity = 44/106 (41.51%), Postives = 59/106 (55.66%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPAL-LPGLPGGSVVYLLYAYI-LFAFATAAPKLYLHMLRQRKKQLAPPREADKA 104
            RY FY  S+    P  +KW RYT FIVLYP+G   EL T    LP+++  G+ ++ LP     S  Y  +  + + ++    P+LY HMLRQRKK LAP     KA
Sbjct:  225 RYSFYTFSLLNHLPYLIKWARYTLFIVLYPMGVTGELLTIYAALPYVRETGMYSIRLPNKFNFSFDYYTFLILTMVSYIPLFPQLYFHMLRQRKKVLAPAEGYSKA 330          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: A0A061S8X2_9CHLO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8X2_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.290e-13
Identity = 42/101 (41.58%), Postives = 61/101 (60.40%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPAL-LPGLPGGSVVYLLYAYILFA-FATAAPKLYLHMLRQRKKQLAPPR 99
            RYP+YA ++   CP AL W+RYTAFI LYP+G  +E+   +  LP  K  G+ +L +P     +  Y ++ + L A +  A  +LY  +LR R K+LAPPR
Sbjct:  109 RYPWYAATLLGRCPHALTWLRYTAFIPLYPVGVLAEVWIILEALPIAKESGMYSLRMPNWANFAFDYPMFLWALLAVYPFAWLQLYAQLLRSRSKKLAPPR 209          
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Match: D2V547_NAEGR (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2V547_NAEGR)

HSP 1 Score: 73.6 bits (179), Expect = 1.460e-13
Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 0
Query:    1 RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKALGLPAL-LPGLPGGSVVYLLYAYI-LFAFATAAPKLYLHMLRQRKKQLAPPRE 100
            RY FYA  +  +CP  + W+RYT FIVLYPLG +SEL      L ++K     +L +P     S    ++ +I +F++    P+LY++M  QRKK LAPP++
Sbjct:  139 RYSFYAFKLYDICPHFIVWLRYTTFIVLYPLGVSSELALTYFRLNYLKEHRPMSLTMPNAYNMSFDSYIFVWIVMFSYLPGFPQLYMYMFAQRKKVLAPPKD 240          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161714.3937.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX13_ECTSI6.270e-4776.84Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835Z8Y0_9STRA1.990e-2350.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7S1B590_9STRA1.210e-1440.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A6I8PHZ0_ORNAN2.340e-1443.00Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
W5M3L3_LEPOC3.060e-1441.51Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
D9IVF2_STRIE5.100e-1441.24Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A7M7N2M7_STRPU5.980e-1441.24Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A8J7TJ93_ATRSP6.930e-1441.51Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A061S8X2_9CHLO1.290e-1341.58Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
D2V547_NAEGR1.460e-1340.20Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 1..96
e-value: 8.1E-23
score: 81.0
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 1..100
NoneNo IPR availablePANTHERPTHR11035:SF35VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEcoord: 1..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 44..62
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 86..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..43
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 63..85
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig161714contigH-elongata_contig161714:128..1071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig161714.3937.1mRNA_H-elongata_contig161714.3937.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig161714 128..1086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig161714.3937.1 ID=prot_H-elongata_contig161714.3937.1|Name=mRNA_H-elongata_contig161714.3937.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=108bp
RYPFYALSIARMCPPALKWMRYTAFIVLYPLGFASELGTWIVGLPHMKAL
GLPALLPGLPGGSVVYLLYAYILFAFATAAPKLYLHMLRQRKKQLAPPRE
ADKAKTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007482Tyr_Pase-like_PTPLA