prot_H-elongata_contig161545.3928.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-elongata_contig161545.3928.1
Unique Name	prot_H-elongata_contig161545.3928.1
Type	polypeptide
Organism	Himanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length	125

Homology

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AGZ2_9PHAE (15-cis-phytoene synthase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2D2AGZ2_9PHAE)

HSP 1 Score: 236 bits (602), Expect = 3.340e-74
Identity = 116/125 (92.80%), Postives = 120/125 (96.00%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            W  RL+EVWE KPRD+LDLA+VDVRQNYPSLPI PFKDMIDGMVMDVPGIGKNRY TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLP+E
Sbjct:  191 WTNRLQEVWEGKPRDALDLAMVDVRQNYPSLPIAPFKDMIDGMVMDVPGIGKNRYSTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPME 315

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AGZ4_9PHAE (15-cis-phytoene synthase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2D2AGZ4_9PHAE)

HSP 1 Score: 236 bits (601), Expect = 4.140e-74
Identity = 115/125 (92.00%), Postives = 122/125 (97.60%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA+RL++VWE KPRDSLDLALVDVRQ YPSLPI PFKDMIDGMVMDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTA+GV+EEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPL+
Sbjct:  186 WAVRLDDVWEGKPRDSLDLALVDVRQKYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTADGVTEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLQ 310

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH03_9PHAE (15-cis-phytoene synthase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A2D2AH03_9PHAE)

HSP 1 Score: 237 bits (604), Expect = 4.970e-74
Identity = 115/125 (92.00%), Postives = 122/125 (97.60%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA+RL++VW  KPRDSLDLALVDVR+NYP+LPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  236 WAVRLDDVWRGKPRDSLDLALVDVRENYPTLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 360

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: D7FT46_ECTSI (15-cis-phytoene synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT46_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 6.000e-74
Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA RLE VWE KP+D+LDLALVDVR+NYPSLPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  258 WATRLENVWEGKPKDALDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 382

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH06_UNDPI (15-cis-phytoene synthase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A2D2AH06_UNDPI)

HSP 1 Score: 235 bits (599), Expect = 1.460e-73
Identity = 116/125 (92.80%), Postives = 123/125 (98.40%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA+RL++V++ KPRDSLDLALVDVR+NYPSLPI PFKDMIDGMVMDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  210 WAVRLDDVFKGKPRDSLDLALVDVRENYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 334

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH33_SCYLO (15-cis-phytoene synthase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A2D2AH33_SCYLO)

HSP 1 Score: 235 bits (600), Expect = 2.280e-73
Identity = 115/125 (92.00%), Postives = 121/125 (96.80%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA RL++VW+ KP DSLDLALVDVR+NYPSLPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  242 WAARLDDVWKGKPTDSLDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 366

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A6H5KMJ2_9PHAE (15-cis-phytoene synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ2_9PHAE)

HSP 1 Score: 235 bits (599), Expect = 2.460e-73
Identity = 114/125 (91.20%), Postives = 121/125 (96.80%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            WA RL+ VWE KPRD+LDLALVDVR+NYP+LPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTA+GVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  232 WATRLDNVWEGKPRDALDLALVDVRENYPTLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTADGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 356

[Close]

BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH04_9PHAE (15-cis-phytoene synthase n=5 Tax=Sargassum TaxID=3015 RepID=A0A2D2AH04_9PHAE)

HSP 1 Score: 232 bits (591), Expect = 3.600e-72
Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            W+ RLE+VW  KPRDSLDLALVDVR+ YP+LPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLP+LGTA GVSEEDAK+PALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  230 WSSRLEDVWAGKPRDSLDLALVDVREIYPTLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKYPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 354

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH02_9PHAE (15-cis-phytoene synthase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2D2AH02_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 4.910e-71
Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            W +RLE+VW  KPRD+LDLALVDVR++YPSLPI PFKDMIDGMVMDVPGIGKNRY+TF+ELELYCYRVAGTVGLM LPIL TAEGVS+EDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct:  184 WTVRLEDVWRGKPRDALDLALVDVRESYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFKELELYCYRVAGTVGLMTLPILKTAEGVSQEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 308

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BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A835ZE11_9STRA (15-cis-phytoene synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE11_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.110e-57
Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 0

Query:    1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 125
            W  RLE ++E K  D+LDLALVD +Q YP+L I PFKDMI GM++DVPG GK RY TF ELE YCYRVAGTVGLM LP+LGTA+G++EE AK PALSLGIALQLTNILRDVGEDAVRGRIYLP E
Sbjct:  121 WTQRLEGIFEGKGLDALDLALVDAKQRYPTLSIRPFKDMIGGMLLDVPGAGKQRYATFSELEEYCYRVAGTVGLMTLPVLGTAKGITEEQAKEPALSLGIALQLTNILRDVGEDAVRGRIYLPQE 245

The following BLAST results are available for this feature:

BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot

BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A2D2AGZ2_9PHAE	3.340e-74	92.80	15-cis-phytoene synthase n=1 Tax=Ishige okamurae T...	[more]
A0A2D2AGZ4_9PHAE	4.140e-74	92.00	15-cis-phytoene synthase n=1 Tax=Desmarestia virid...	[more]
A0A2D2AH03_9PHAE	4.970e-74	92.00	15-cis-phytoene synthase n=1 Tax=Punctaria latifol...	[more]
D7FT46_ECTSI	6.000e-74	92.80	15-cis-phytoene synthase n=1 Tax=Ectocarpus silicu...	[more]
A0A2D2AH06_UNDPI	1.460e-73	92.80	15-cis-phytoene synthase n=1 Tax=Undaria pinnatifi...	[more]
A0A2D2AH33_SCYLO	2.280e-73	92.00	15-cis-phytoene synthase n=1 Tax=Scytosiphon lomen...	[more]
A0A6H5KMJ2_9PHAE	2.460e-73	91.20	15-cis-phytoene synthase n=1 Tax=Ectocarpus sp. CC...	[more]
A0A2D2AH04_9PHAE	3.600e-72	91.20	15-cis-phytoene synthase n=5 Tax=Sargassum TaxID=3...	[more]
A0A2D2AH02_9PHAE	4.910e-71	88.80	15-cis-phytoene synthase n=1 Tax=Dictyopteris undu...	[more]
A0A835ZE11_9STRA	5.110e-57	75.20	15-cis-phytoene synthase n=1 Tax=Tribonema minus T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF00494	SQS_PSY	coord: 12..125 e-value: 2.2E-32 score: 112.6
None	No IPR available	PANTHER	PTHR31480	FAMILY NOT NAMED	coord: 1..124
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10		coord: 1..125 e-value: 7.1E-44 score: 152.0
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 4..125
IPR019845	Squalene/phytoene synthase, conserved site	PROSITE	PS01045	SQUALEN_PHYTOEN_SYN_2	coord: 98..123

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-elongata_contig161545	contig	H-elongata_contig161545:67..1389 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-elongata_contig161545.3928.1	mRNA_H-elongata_contig161545.3928.1	Himanthalia elongata Himel1 dioecious	mRNA	H-elongata_contig161545 67..1389 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-elongata_contig161545.3928.1 ID=prot_H-elongata_contig161545.3928.1|Name=mRNA_H-elongata_contig161545.3928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp
WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGI
GKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGI
ALQLTNILRDVGEDAVRGRIYLPLE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008949	Isoprenoid_synthase_dom_sf
IPR019845	Squalene/phytoene_synthase_CS