mRNA_H-elongata_contig161545.3928.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AGZ2_9PHAE (15-cis-phytoene synthase n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A2D2AGZ2_9PHAE) HSP 1 Score: 236 bits (602), Expect = 3.340e-74 Identity = 116/125 (92.80%), Postives = 120/125 (96.00%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
W RL+EVWE KPRD+LDLA+VDVRQNYPSLPI PFKDMIDGMVMDVPGIGKNRY TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLP+E
Sbjct: 191 WTNRLQEVWEGKPRDALDLAMVDVRQNYPSLPIAPFKDMIDGMVMDVPGIGKNRYSTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPME 315
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AGZ4_9PHAE (15-cis-phytoene synthase n=1 Tax=Desmarestia viridis TaxID=62313 RepID=A0A2D2AGZ4_9PHAE) HSP 1 Score: 236 bits (601), Expect = 4.140e-74 Identity = 115/125 (92.00%), Postives = 122/125 (97.60%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA+RL++VWE KPRDSLDLALVDVRQ YPSLPI PFKDMIDGMVMDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTA+GV+EEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPL+
Sbjct: 186 WAVRLDDVWEGKPRDSLDLALVDVRQKYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTADGVTEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLQ 310
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH03_9PHAE (15-cis-phytoene synthase n=1 Tax=Punctaria latifolia TaxID=90013 RepID=A0A2D2AH03_9PHAE) HSP 1 Score: 237 bits (604), Expect = 4.970e-74 Identity = 115/125 (92.00%), Postives = 122/125 (97.60%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA+RL++VW KPRDSLDLALVDVR+NYP+LPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 236 WAVRLDDVWRGKPRDSLDLALVDVRENYPTLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 360
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: D7FT46_ECTSI (15-cis-phytoene synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT46_ECTSI) HSP 1 Score: 237 bits (605), Expect = 6.000e-74 Identity = 116/125 (92.80%), Postives = 121/125 (96.80%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA RLE VWE KP+D+LDLALVDVR+NYPSLPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 258 WATRLENVWEGKPKDALDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 382
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH06_UNDPI (15-cis-phytoene synthase n=1 Tax=Undaria pinnatifida TaxID=74381 RepID=A0A2D2AH06_UNDPI) HSP 1 Score: 235 bits (599), Expect = 1.460e-73 Identity = 116/125 (92.80%), Postives = 123/125 (98.40%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA+RL++V++ KPRDSLDLALVDVR+NYPSLPI PFKDMIDGMVMDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 210 WAVRLDDVFKGKPRDSLDLALVDVRENYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 334
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH33_SCYLO (15-cis-phytoene synthase n=1 Tax=Scytosiphon lomentaria TaxID=27967 RepID=A0A2D2AH33_SCYLO) HSP 1 Score: 235 bits (600), Expect = 2.280e-73 Identity = 115/125 (92.00%), Postives = 121/125 (96.80%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA RL++VW+ KP DSLDLALVDVR+NYPSLPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 242 WAARLDDVWKGKPTDSLDLALVDVRENYPSLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 366
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A6H5KMJ2_9PHAE (15-cis-phytoene synthase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMJ2_9PHAE) HSP 1 Score: 235 bits (599), Expect = 2.460e-73 Identity = 114/125 (91.20%), Postives = 121/125 (96.80%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
WA RL+ VWE KPRD+LDLALVDVR+NYP+LPI PFKDMIDGM+MDVPGIGKNRY+TFEELELYCYRVAGTVGLMVLPILGTA+GVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 232 WATRLDNVWEGKPRDALDLALVDVRENYPTLPIAPFKDMIDGMIMDVPGIGKNRYQTFEELELYCYRVAGTVGLMVLPILGTADGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 356
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH04_9PHAE (15-cis-phytoene synthase n=5 Tax=Sargassum TaxID=3015 RepID=A0A2D2AH04_9PHAE) HSP 1 Score: 232 bits (591), Expect = 3.600e-72 Identity = 114/125 (91.20%), Postives = 120/125 (96.00%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
W+ RLE+VW KPRDSLDLALVDVR+ YP+LPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLP+LGTA GVSEEDAK+PALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 230 WSSRLEDVWAGKPRDSLDLALVDVREIYPTLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPVLGTAPGVSEEDAKYPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 354
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A2D2AH02_9PHAE (15-cis-phytoene synthase n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A2D2AH02_9PHAE) HSP 1 Score: 228 bits (580), Expect = 4.910e-71 Identity = 111/125 (88.80%), Postives = 119/125 (95.20%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
W +RLE+VW KPRD+LDLALVDVR++YPSLPI PFKDMIDGMVMDVPGIGKNRY+TF+ELELYCYRVAGTVGLM LPIL TAEGVS+EDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE
Sbjct: 184 WTVRLEDVWRGKPRDALDLALVDVRESYPSLPIAPFKDMIDGMVMDVPGIGKNRYQTFKELELYCYRVAGTVGLMTLPILKTAEGVSQEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 308
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Match: A0A835ZE11_9STRA (15-cis-phytoene synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE11_9STRA) HSP 1 Score: 190 bits (482), Expect = 5.110e-57 Identity = 94/125 (75.20%), Postives = 105/125 (84.00%), Query Frame = 1
Query: 1 WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIGKNRYETFEELELYCYRVAGTVGLMVLPILGTAEGVSEEDAKFPALSLGIALQLTNILRDVGEDAVRGRIYLPLE 375
W RLE ++E K D+LDLALVD +Q YP+L I PFKDMI GM++DVPG GK RY TF ELE YCYRVAGTVGLM LP+LGTA+G++EE AK PALSLGIALQLTNILRDVGEDAVRGRIYLP E
Sbjct: 121 WTQRLEGIFEGKGLDALDLALVDAKQRYPTLSIRPFKDMIGGMLLDVPGAGKQRYATFSELEEYCYRVAGTVGLMTLPVLGTAKGITEEQAKEPALSLGIALQLTNILRDVGEDAVRGRIYLPQE 245 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161545.3928.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig161545.3928.1 >prot_H-elongata_contig161545.3928.1 ID=prot_H-elongata_contig161545.3928.1|Name=mRNA_H-elongata_contig161545.3928.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=125bp WALRLEEVWEEKPRDSLDLALVDVRQNYPSLPIEPFKDMIDGMVMDVPGIback to top mRNA from alignment at H-elongata_contig161545:67..1389- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig161545.3928.1 ID=mRNA_H-elongata_contig161545.3928.1|Name=mRNA_H-elongata_contig161545.3928.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1323bp|location=Sequence derived from alignment at H-elongata_contig161545:67..1389- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig161545:67..1389- >mRNA_H-elongata_contig161545.3928.1 ID=mRNA_H-elongata_contig161545.3928.1|Name=mRNA_H-elongata_contig161545.3928.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=750bp|location=Sequence derived from alignment at H-elongata_contig161545:67..1389- (Himanthalia elongata Himel1 dioecious)back to top |