prot_H-elongata_contig16150.3927.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16150.3927.1
Unique Nameprot_H-elongata_contig16150.3927.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length392
Homology
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A2N9IFW4_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IFW4_FAGSY)

HSP 1 Score: 189 bits (481), Expect = 1.460e-49
Identity = 141/428 (32.94%), Postives = 210/428 (49.07%), Query Frame = 0
Query:    1 MESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAANPRSLGSLTARRRWWKISTSRK---EARY---------------------WLRRGLPTFSKADE------------------PRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEA------VQKFME-----PSMMAGAVNVFEDNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRVVLLITHLA 375
            M   + + W+KA E+ M  M  N V     +P+     G   +YKRK+   GK+E YK RLV +G+ Q  G+ Y + + P     SIR+ L+ AA  D E+   D K AFL  +I EE+Y++ P  +     A   R++ S+   + W     + K   EA Y                     ++ + L  FS  D                   P+  EE+E++RN PY  AVG LM+    T  DI  A   V+R+  NPGP H  AV  I++YL  TK + + +G +   L ++ YTDS+F++ +D R+S+SG V  L KGAI W S  Q+ T   T+EAE +A SEA      ++KF++     PS+ +  + +  DN G+I  A    A +RTKHI+ + H++ D      V     ITH+A
Sbjct:  555 MNDKDVEHWKKAMESEMDSMYTNQVWTLVDKPEGIKPIGCKWIYKRKLGPTGKVETYKARLVAKGYTQKVGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFH-ISWARIKRAMSSI---KMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVHLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSNFQSDIDDRKSISGFVFTLGKGAISWRSCKQDTTADSTTEAEYIAASEAAKEAVWIRKFIQELGVVPSIES-PIKIHCDNNGAIANAVEPRAHKRTKHIERRFHLIHDIIHRGDVE----ITHIA 971          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A5AHF5_VITVI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AHF5_VITVI)

HSP 1 Score: 176 bits (446), Expect = 8.620e-47
Identity = 137/423 (32.39%), Postives = 202/423 (47.75%), Query Frame = 0
Query:    1 MESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPE----------EY--QDFP----GAAN---------PRSLGSLTARRRW---WKISTSRKEARYWLRRGLPTFSKADE------PRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEA------VQKFMEP----SMMAGAVNVFEDNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRVVLLITHLADDQP 379
            MES +  KW +A    +  +  N V      P      G   ++K K +  G IE+YK RLV +GF Q EG+ Y   + P     S+R+ +   A  D EL   D K AFL  ++DE++Y+E PE          EY  ++F     G AN          RS G L   ++    W +     ++      G+    K D+      PRN  E+E+++  PY  AVG LM+  T T  DI+       R+  +PG  H KA  K+M+YL  TKD+ +TY R    L +  Y+DSD+  CLD+ +S SG V MLA GAI W S  Q +T S T EAE VA  EA      ++ F+        +A  + ++ DN  ++  + N   S  +KH+D+K+ +V++    Q V +  + T L    P
Sbjct:   51 MESDDSSKWMEAMNEELKSIAHNDVWDLIELPNSCKPVGCKWIFKTKRDAKGNIERYKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMTLVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGDLGLLHETKEYLSKNFHMVDMGEANYVIGIEIFRDRSRGVLGLSQKGYIDWVLERFNMQS---CSSGIAPILKGDKLSKMQCPRNNMEREQMKKIPYASAVGSLMYAQTCTRPDISFVVGMFGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYKRSE-QLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQSITASSTMEAEFVACFEASSHALWLRNFISGLGVVDSIAKPLRIYCDNTAAVFFSKNGKFSSGSKHMDLKYLVVKERVQKQQVSIENIRTTLMVGDP 469          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A438CBX1_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438CBX1_VITVI)

HSP 1 Score: 172 bits (436), Expect = 2.050e-45
Identity = 124/385 (32.21%), Postives = 186/385 (48.31%), Query Frame = 0
Query:    2 ESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAANPRSLGSLTARRRWWKISTSRKEARYWLRRGLP---------TFSKADEPRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEA------VQKFMEPSMMAGAVN----VFEDNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRV 367
            +S   +KW +A +  M  M +N V      PK     G   ++K K +  G I +YK RLV +GF Q E + Y + + P  +  S R+ +   A  D EL   D K  FL  +IDE +Y+  PE ++           GS        K    +  +R+ +    P          FS    P+N  EK+++  FPY   VG LM+    T  DIA     + R+  N G  H K V ++MQYL  TKD+ +TY R    L +  Y+DSDF  CLD+RRS SG + MLA GA+ W S  Q +  S T EAE +A  EA      ++ F+    +   +     +  DN+ +   + N  +S ++KHID+K  +V++   VQ+++V
Sbjct:   63 QSSNSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEAIDYKETFSPVSSKDSFRIIMTLVAHYDLELHQMDVKTTFLNSNIDETIYMVQPENFESNDSKQLINRNGSRGILGLSQKAYIDKVLSRFGMSNCAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASVVGSLMYAQVCTCPDIAYIVGMLGRYLSNLGMDHWKKVKQVMQYLQRTKDYMLTYHRSS-HLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLIASSTMEAEFIACYEASNHGIWLRNFVTQLRIVDGIEKPLRINCDNKAAELYSKNNRSSSKSKHIDIKFLIVKER--VQSLQV 444          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 176 bits (447), Expect = 5.020e-45
Identity = 135/425 (31.76%), Postives = 194/425 (45.65%), Query Frame = 0
Query:    1 MESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAAN-PRSLGSLTARRRWW---------KISTSRKEA------------------------------------RYWLR----------RGLPTFSKADEPR--NPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEAVQ---------KFMEPSMMAGAVNVFEDNEGSIKLATNKHASRRTKHIDVKHHMVRD 358
            M S E ++WR+A E     +++N    +T  P  +      +++K+K + DGK+ +YK RLV +GF Q  G+ Y + Y P     SIR   + AA +D E+  FD K AFL  ++DEE+++++P    D        +SL  L    R W         K +    EA                                     Y LR          +G+ T  +A +    N  +     N PYREAVG LM+ A +T  DI  A   V+R+ E     H  AV +I++Y   T D+GI Y        +  Y+DSDF A  DTRRS SG V +   G I W S  Q++    T+EAE VA S+A +         K +  + +  A  +  DN+GSIKL  N    +RTKHIDV+ H +RD
Sbjct:  572 MASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVTDAGNVVKLQKSLYGLKQSPRQWNKRFHQFLCKFNFISSEADRCVYKGNIEGERVLLALYVDDGLVMAKTQQAVEMKNYLLRVAKRFNMEDAKGISTPMEAGKYLVINNNDTSAGMNVPYREAVGSLMFAACVTRPDIMFAVAVVSRYLEQSATEHWTAVKRIIRYAKETADYGIVYDG-ATAEPLVIYSDSDFAADPDTRRSTSGYVTVHCGGPISWQSIRQKIVALSTTEAEYVAASDATKEAIWIRRLMKSVGAAAVGHATELRLDNQGSIKLIKNPEFHKRTKHIDVRFHFIRD 995          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A5ASB2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5ASB2_VITVI)

HSP 1 Score: 168 bits (425), Expect = 4.470e-44
Identity = 121/374 (32.35%), Postives = 182/374 (48.66%), Query Frame = 0
Query:    2 ESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAANPRSLGSLTARRRWWK--ISTSRKE------ARYWLRRGLP---TFSKADE------PRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEAVQKFMEPSMMAGAVNVFEDNEGSIKLATNKHASRRTKHIDVKHHMVRD 358
            +S + +KW +A +  M  M +N V      PK     G   ++K K +    I +YK RLV +GF Q E + Y + + P  +  S R+ +A  A  D EL   D K  FL  +IDE +Y+       D     N   +  +   R   +  +  S+K       +R+ +    P     +K D+      P+N  EK+++  FPY  AVG L++    T  DIA     + R+  NPG  H K   ++M+YL  TKD+ +TY R    L +  Y+DSDF  CLD+RRS SG + MLA GA+ W S  Q +  S T EAE +A  EA           G   +  DN+G+   + N  +S ++KHID+K  +V++
Sbjct:   42 QSSDSEKWIEAMKDEMKSMKDNGVWDLVKLPKGVKPIGCKWIFKTKRDSKDNIVRYKARLVAKGFTQKEDIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTTFLNGNIDETIYMRFLSSKFDMKDLGNASFMLGIQIHRDSSRGILGLSQKAYIDKVLSRFGMSNCAPGDMPLAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLIYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYHRSS-HLEIVGYSDSDFIGCLDSRRSTSGYIFMLAGGAVSWKSVKQTLIASSTMEAEFIACYEASNH--------GIWLINCDNKGAELYSKNNRSSSKSKHIDIKFLVVKE 406          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A438D4E2_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438D4E2_VITVI)

HSP 1 Score: 172 bits (437), Expect = 5.780e-44
Identity = 122/382 (31.94%), Postives = 194/382 (50.79%), Query Frame = 0
Query:   43 LYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPG---------------------AANPRSL-----GSLTARRRWWKISTSRKEARYWLRRGLPTFS---KADE------PRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEA------VQKFMEPSMMAGAVN----VFEDNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRVVLLITHLADDQP 379
            ++K K +  G IE+YK RLV +GF Q EG+ YT+ + P     S+R+ LA  A  D EL+  D K AFL  +++EE+Y++ PE +    G                     A N + L     G L   +  +    ++   R+ ++   P+ S   K D       P+N  E+E+++N PY  AVG LM+    T  DIA A   + R+  N G  H KA  K+M+YL  TKD+ + Y R+   L +  Y+DSDF  C+D+R+S SG + +LA GAI W S  Q +T + T EAE ++  EA      ++ F+    +  +++    ++ DN  ++ +A N  +  R+KHID+K+  +R+    + V +  + T L    P
Sbjct:  395 VFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSSDGEQLVSGSKVCFLVLYVDDILLATNDKGLLHEIKGILGLSQETY---INKVLERFRMKNCSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNLGIDHWKAAKKVMRYLQGTKDYKLMY-RRTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILASGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLKSFISGLRVMDSISRPLSIYCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRERVKEKKVVIEHISTELMIADP 772          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A4Z0A825_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A825_9AGAM)

HSP 1 Score: 167 bits (423), Expect = 1.750e-43
Identity = 120/376 (31.91%), Postives = 197/376 (52.39%), Query Frame = 0
Query:    5 EWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAANPRS-LGSLTARRRWWKISTSRKEARYWLRRGL-PTF--SKADEPRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEAVQKFMEPSMMAGAV-NVFE-------DNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRVV 368
            EW KW +A E  +  M +    K   +P    + G   ++K K +  G I KYK RLV QGF Q+ GV +T  + P    +SIR+    AA  + EL   D K A+L  D+DEE+Y++ P  +   PG  + R+ + ++ AR   + +  S+      L   L P+F  + A  P   ++ EE+RN PYREA+G LM+ A  T  DIA A   +++F +NPG  H +    +++YL  TK+  +TY R      +  Y+D+D+ +  D R  +SG V ++  GA+ W S+ Q +    ++EAE VA++ A ++ +      G +   F+       DN+ ++ LA +     RTKHI +++H +R+  +   + +V
Sbjct:   93 EWPKWEEAIEDELVRMEKMGTWKLVEKPDRVNIVGSKWVFKIKRDAAGTIIKYKARLVAQGFSQIPGVDFTDTFAPVAKLSSIRILAVLAAHFNWELHQMDVKNAYLNGDLDEEIYMKQPPGFPA-PGQEHKRAYIDTILAR---FNLEDSKP-----LDTALDPSFQLTTAQSPSTLQQYEEMRNVPYREAIGSLMYAALGTRPDIAYAVTTLSQFMQNPGRMHWEGAKCVLRYLKATKEEWLTY-RGDAKTGIMGYSDADWGSS-DHRHFISGYVFLVDSGAVSWSSKKQPIVALLSTEAEYVAMTHAAKEAVWMRAFLGEMLTPFDMPTLLHCDNQSAMTLAKDNIFHSRTKHIAIRYHFIRNIIEHDEIDLV 457          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A0J7KHD5_LASNI (Retrotransposon ty1-copia subclass n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KHD5_LASNI)

HSP 1 Score: 171 bits (434), Expect = 2.670e-43
Identity = 133/398 (33.42%), Postives = 197/398 (49.50%), Query Frame = 0
Query:    9 WRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPE------------EYQDFPGAANPRSLGS------LTARR----RWWKISTSRKEARYWLR----------RGLPT-------FSKADEPRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITY-GRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEAVQKFMEPSMMAGAVNVFE--------DNEGSIKLATNKHASRRTKHIDVKHHMVRD 358
            W+KA +  +  +++N        P  +       ++K K    G+I +YK RLV +G+ Q   V YT+ Y P     S+R  LA AA +D E+   D K AFL   +DEE+Y+ +P+            +  D+       ++GS      L  +R    R  KIS    +  Y LR          +G+ T        S   E  N  +K ++   P+REAVG LM+ A ++  DI  A   V+R+ ENPG  H +AV +I++Y   T  +GI Y G    GL +  Y+DSD+    DTRRS SG V +LA GA+ W S+ Q +    T+EAE VA S+A ++ +    +  +V V +        DN+GSIKL  N    +RTKHIDV+ H +R+
Sbjct:  503 WQKAVDEELASLMKNGTWCEADLPPGRQAISAKWVFKLKRGPSGEIVRYKARLVARGYAQRPNVDYTETYSPVVRYESVRALLAIAAQQDMEIAQGDVKTAFLYGTLDEEIYMTVPDGAPNAGQVTAVDKVMDYLMTEFEVTIGSTEYFIGLEIKRDCIVRTIKIS----QRNYLLRVAEKIGLADAKGISTPAESRVYLSTTSEDNN--DKRDMEKVPFREAVGSLMFAACVSRPDIMFAVSVVSRYLENPGLEHWQAVKRIIRYAKETAAYGIVYDGHNTDGLII--YSDSDYATDPDTRRSTSGYVTVLAGGAVSWMSQRQRIVALSTTEAEYVAASDATKEAIWIRRLLESVGVNKKGPIEMRLDNQGSIKLIKNPEFHKRTKHIDVRFHYIRE 892          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A6H5L0Z9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Z9_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.210e-43
Identity = 110/332 (33.13%), Postives = 170/332 (51.20%), Query Frame = 0
Query:   78 YLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEELYIEIPEEY--------------------QDFPGAANPRSLGSLTARRRWW--------------KISTSRKEARYWLRRG--------LPTFSKADEPRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQG-CGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEAVQ---------KFMEPSMMAGAVNVFEDNEGSIKLATNKHASRRTKHIDVKHHMVR 357
            Y PT A +S+R+  A A  ++  LRHFD KQAF++ D+DE++++ +PE                      +D       ++LG L    RW+              KIS         +  G        LP   K  E    ++ EE+ ++P+RE +G LMW AT T  DIA+A RAV R+  +P   H +A + I+ Y++ T + GIT+ R    GL ME + D+D+ +    RRS+SG ++M   G I W+SR Q+     T+EAE V+L++ ++         +FM P      + VFEDN+G+I+LA N  ++  +KHI V+HH +R
Sbjct:   12 YAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSDDIFSIGEEERCDQFGRDLNTMVPVKNLGDL----RWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEF---DQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHCRAGLGILGYVVRTSELGITFRRGSVAGLSMEVFADADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIHVRHHFIR 336          
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Match: A0A438GKY6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GKY6_VITVI)

HSP 1 Score: 169 bits (427), Expect = 2.610e-42
Identity = 132/433 (30.48%), Postives = 207/433 (47.81%), Query Frame = 0
Query:    1 MESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQDGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGELRHFDAKQAFLKVDIDEE----------LYIE-----------IPEEYQDFPGAANPRSLGSLTA-------RRRWWKISTSRKEA-------RYWLRRGLPTFS---KADE------PRNPEEKEEIRNFPYREAVGVLMWTATMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQGCGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTSEAENVALSEA------VQKFMEPSMMAGAVN----VFEDNEGSIKLATNKHASRRTKHIDVKHHMVRDASDVQTVRVVLLITHLADDQP 379
            M   E + W  A +  M  M  N V      P      G   ++K K +  G IE+YK +LV +GF Q EG+ YT+ + P     S+R+ LA  A  D EL+  D K AFL  +++EE          LY++           + E  Q      + + +G  +        R R+  I    +E        R+ ++   P+ S   K D       P+N  E+E+++N PY  AVG LM+    T  DIA A   + R+  NPG  H KA  K+M+YL  TKD+ + Y R+   L +  Y+DSDF  C+D+R+S SG + +LA GAI W S  Q +T + T EAE ++  EA      ++ F+    +  +++    ++ DN  ++ +A N  +  R+KHID+K+  +R+    + V +  + T L    P
Sbjct:  892 MNCKESELWYNAMKDEMSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKAKLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVSGSKVCFFVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETHINKVLERFRMKNCSPSVSPIVKGDSFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMY-RRTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRSVKQTMTATSTMEAEFISCFEATSHGVWLKSFISGLRVMDSISRPLSIYCDNSAAVFMAKNNKSGSRSKHIDIKYLAIRERVKEKKVVIEHISTELMIADP 1323          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16150.3927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2N9IFW4_FAGSY1.460e-4932.94CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A5AHF5_VITVI8.620e-4732.39Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438CBX1_VITVI2.050e-4532.21Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K690_LASNI5.020e-4531.76Retrovirus-related pol polyprotein from transposon... [more]
A5ASB2_VITVI4.470e-4432.35Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]
A0A438D4E2_VITVI5.780e-4431.94Retrovirus-related Pol polyprotein from transposon... [more]
A0A4Z0A825_9AGAM1.750e-4331.91Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0J7KHD5_LASNI2.670e-4333.42Retrotransposon ty1-copia subclass n=1 Tax=Lasius ... [more]
A0A6H5L0Z9_9PHAE3.210e-4333.13Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A438GKY6_VITVI2.610e-4230.48Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 31..125
e-value: 2.2E-17
score: 63.5
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 189..359
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 189..359

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16150contigH-elongata_contig16150:6376..7596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16150.3927.1mRNA_H-elongata_contig16150.3927.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16150 6355..7596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16150.3927.1 ID=prot_H-elongata_contig16150.3927.1|Name=mRNA_H-elongata_contig16150.3927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=392bp
MESLEWDKWRKAEETYMCGMVENCVCKRTTRPKDKLVAGKTLLYKRKVEQ
DGKIEKYKCRLVTQGFWQVEGVHYTKKYLPTPATASIRMFLATAAAKDGE
LRHFDAKQAFLKVDIDEELYIEIPEEYQDFPGAANPRSLGSLTARRRWWK
ISTSRKEARYWLRRGLPTFSKADEPRNPEEKEEIRNFPYREAVGVLMWTA
TMTWMDIASATRAVTRFYENPGPAHKKAVMKIMQYLLHTKDWGITYGRQG
CGLRMEAYTDSDFRACLDTRRSMSGAVLMLAKGAIGWYSRMQEVTPSGTS
EAENVALSEAVQKFMEPSMMAGAVNVFEDNEGSIKLATNKHASRRTKHID
VKHHMVRDASDVQTVRVVLLITHLADDQPDLVAFCSWSAGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like