prot_H-elongata_contig16139.3923.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16139.3923.1
Unique Nameprot_H-elongata_contig16139.3923.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length282
Homology
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: D7FSX6_ECTSI (PUM-HD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSX6_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 8.890e-165
Identity = 250/277 (90.25%), Postives = 258/277 (93.14%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 281
            VEAVT+RMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAIT SLVQVA+HRHGCCVLQRCLDAAGP+LRIKLI E       VARNGL+LMQDPFGNYVVQYVLKTCSREETY LCSAPLGHVASLSTQKFSSNVMEACLERA+PE+Q+KFVEELAQQGRIRELILDQYANYVVQRALTVA NEEGLKLV AIRPHLHSMQ+       TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct:  467 VEAVTDRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEE-------VARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVANNEEGLKLVNAIRPHLHSMQS-------TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 729
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A6H5JG61_9PHAE (PUM-HD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG61_9PHAE)

HSP 1 Score: 481 bits (1239), Expect = 1.570e-159
Identity = 249/277 (89.89%), Postives = 257/277 (92.78%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 281
            VEAV +RMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAIT SLVQVA+HRHGCCVLQRCLDAAGP+LRIKLI E       VARNGL+LMQDPFGNYVVQYVLKTCSREETY LCSAPLGHVASLSTQKFSSNVMEACLERA+PE+Q+KFVEELAQQGRIRELILDQYANYVVQRALTVA NEEGLKLV AIRPHLHSMQ+       TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG
Sbjct:  855 VEAVADRMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITASLVQVAIHRHGCCVLQRCLDAAGPNLRIKLIEE-------VARNGLRLMQDPFGNYVVQYVLKTCSREETYMLCSAPLGHVASLSTQKFSSNVMEACLERALPEVQSKFVEELAQQGRIRELILDQYANYVVQRALTVASNEEGLKLVNAIRPHLHSMQS-------TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG 1117
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A3R7AAA0_9STRA (PUM-HD domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A3R7AAA0_9STRA)

HSP 1 Score: 249 bits (636), Expect = 2.190e-77
Identity = 133/270 (49.26%), Postives = 175/270 (64.81%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQ---AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLG 271
            V+ V   +  AA+NLHGTR VQKVVE+C + +      +I  +L    V+L +D NGNHV+QRALQ+MPA  N FV +A++     V  HRHGCCVLQRC+DAA P  R ++I +       V ++ +KLMQDP+GNYVVQYVL  CS  +   + +  +GHV  LS QKFSSNV+E CLE A   +   FV E+    R+  ++ DQYANYVVQRAL+VA +E  L LV A+RPHL       TS+  T  GRRI A+I+KR+P +D+G
Sbjct:  108 VQQVAHHLVAAALNLHGTRSVQKVVEICSSSSMPQLVELIVDALKDDAVRLCIDSNGNHVIQRALQYMPATYNQFVFDAVSAECTVVGTHRHGCCVLQRCVDAANPAQRREVIAQ-------VEKHAMKLMQDPYGNYVVQYVLDACSTADVVGVMTKCVGHVLELSIQKFSSNVIEKCLELAPDYLCQTFVREIIASPRMHRMLQDQYANYVVQRALSVASDENCLDLVTAMRPHL-------TSMKNTQGGRRIQARILKRFPHLDVG 363
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A7S2XV53_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV53_9STRA)

HSP 1 Score: 240 bits (612), Expect = 2.840e-75
Identity = 128/273 (46.89%), Postives = 177/273 (64.84%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRT-DAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLGEEILM 276
            ++ V   + +A++NLHGTR VQK++E CRT D Q  V+  +L P +++L LD NGNHVVQ+ +Q +   + DF+  A+  SL  VA HRHGCCVLQRCLD+A P+ R  LI         V  N L+LMQD +GNYVVQYVL   ++ + + +C   LGHV +LS QKFSSNV+E CLE+A   +    + E++    + EL+ DQ+ANYVVQR+L VA +    +LV  I+PHL  ++        TS GRRI AKI+KR+P  DLG++ L+
Sbjct:   21 LQTVKNHLVKASLNLHGTRSVQKILEHCRTNDEQVKVVREALEPHILQLCLDGNGNHVVQKGVQCLGVDQRDFLYRAVGQSLPAVACHRHGCCVLQRCLDSASPEQRRGLI-------AVVVVNALQLMQDAYGNYVVQYVLDIGTQLDAWSVCEKCLGHVHNLSIQKFSSNVVEKCLEKANDRLLNLMISEISNPSSLAELLNDQFANYVVQRSLVVAPHAVATELVDNIKPHLPQLRN-------TSGGRRIIAKILKRFPKTDLGDDFLV 279
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A1V9YPP5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YPP5_9STRA)

HSP 1 Score: 245 bits (626), Expect = 1.080e-73
Identity = 133/263 (50.57%), Postives = 173/263 (65.78%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQ-AAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYP 266
            V+ V+  +  AA+NLHGTR VQKVVE+C TD   A +I ++L    V+L +D NGNHV+QRALQ +PA  N FV +A+      V  HRHGCCVLQRC+DAA    +  +I++       V  + +KLMQDP+GNYVVQYVL  C  +ET  L +   GHV  LS QKFSSNV+E CLE A  E++  FV E+    R+  ++ DQ+ANYVVQRAL+VA +E  L LV AI+PHL +M+        TS GRRI A+I+KR+P
Sbjct:  328 VKRVSPHLVAAALNLHGTRSVQKVVEVCATDRTLATIIVKALRGDAVRLCIDSNGNHVIQRALQFLPADFNQFVFDAVATDCTVVGTHRHGCCVLQRCVDAANEAQKRAVISQ-------VELHAMKLMQDPYGNYVVQYVLDACPNDETVGLMAKCAGHVYELSVQKFSSNVVEKCLELAPYELRQAFVREIIASPRMHRMLQDQFANYVVQRALSVASDELCLDLVHAIQPHLPAMKN-------TSGGRRIQARILKRFP 576
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A833SFT8_PHYIN (Pumilio-family RNA binding repeat domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SFT8_PHYIN)

HSP 1 Score: 240 bits (613), Expect = 1.840e-72
Identity = 130/302 (43.05%), Postives = 177/302 (58.61%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELC--------------------------------RTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLGEEI 274
            +  V+  +  AA+NLHGTR VQKVVE+C                                RT +   +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + ++I +       V R  +KLMQDP+GNYVVQYVL +C+ EE + +   PLGH+  LS QKFSSNV+E CLE+A   ++ K++ E+    ++ +++ DQ+ANYVVQRAL V   E+ L LV AIRPHL +M+        TS GRRI A+I+KR+P +D+  ++
Sbjct:  153 IRRVSSNLVAAALNLHGTRSVQKVVEVCATSSSVIEEDFDEEEEGEEYGYEERPEGGKGRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANKTQKAEVIAQ-------VERQAMKLMQDPYGNYVVQYVLDSCTAEEAFGVIMKPLGHIYELSVQKFSSNVIEKCLEKAPERVRQKYIAEITSCPKMNKMLQDQFANYVVQRALCVCAEEQCLLLVKAIRPHLAAMKN-------TSGGRRITARILKRFPNMDISMDM 440
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A6G0WN87_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WN87_9STRA)

HSP 1 Score: 241 bits (616), Expect = 1.180e-71
Identity = 131/270 (48.52%), Postives = 174/270 (64.44%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAAVI---ARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLG 271
            V+ V+  +  AA+NLHGTR VQKVVE+C + +   +I     +L    V+L +D NGNHV+QRALQ MP+  N FV +A+      V  HRHGCCVLQRC+DAA    + ++I +       V ++ +KLMQDP+GNYVVQYVL  C   +   +    +GHV  LS QKFSSNV+E CLE A   ++  FV+E+    R+  ++ DQYANYVVQRAL+VA  E  L+LVAAIRPHL SM+        T  GRRI A+I+KR+P +D+G
Sbjct:  378 VQHVSFHLVAAALNLHGTRSVQKVVEICASSSHPLLIELIVDALKEDAVRLCIDSNGNHVIQRALQFMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANASQKKEVIAQ-------VEKHAMKLMQDPYGNYVVQYVLDACLPADALGVMEKCVGHVFELSIQKFSSNVIEKCLELAPDYLRQTFVKEIIASPRMYRMLQDQYANYVVQRALSVASEENCLQLVAAIRPHLASMKN-------TQGGRRIQARILKRFPHLDVG 633
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A8K1C9G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9G3_PYTOL)

HSP 1 Score: 246 bits (628), Expect = 1.950e-71
Identity = 131/282 (46.45%), Postives = 178/282 (63.12%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAA----------------VIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDL 270
            +  V+  +  AA+NLHGTR VQKVVE+C T A+                  +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + ++I +       V +  +KLMQDP+GNYVVQYVL +C+ EE Y +   PLG+V  LS QKFSSNV+E CLE+A P +  ++++E+    ++++++ DQ+ANYVVQRAL VA  ++ L LV AIRPHL +M+        TS GRRI A+I+KR+P +DL
Sbjct:  636 IRRVSGNLVAAALNLHGTRSVQKVVEVCATSAEVVELDSDGNELRRVNLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCKECTTVGTHRHGCCVLQRCLDAANDTQKREVITQ-------VEKQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVIVKPLGNVFELSIQKFSSNVIEKCLEKAPPVVLTQYIDEITTCPKMQKMLQDQFANYVVQRALCVASEDQCLALVKAIRPHLVAMKN-------TSGGRRITARILKRFPHMDL 903
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A485KML4_9STRA (Aste57867_9189 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KML4_9STRA)

HSP 1 Score: 241 bits (616), Expect = 2.280e-71
Identity = 133/270 (49.26%), Postives = 173/270 (64.07%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAAV---IARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLG 271
            V+ V   +  AA+NLHGTR VQKVVE+C + +Q A+   I  +L    V+L +D NGNHV+QRALQ+MP+  N FV +A+      V  HRHGCCVLQRC+DAA    + ++I +       V  + +KLMQDP+GNYVVQYVL  CS  +   +    + HV  LS QKFSSNV+E CLE A   ++  FV E+    R+  ++ DQYANYVVQRAL+VA  E  L LVAAIRPHL SM+        T  GRRI A+I+KR+P +D+G
Sbjct:  410 VQHVAFHLVAAALNLHGTRSVQKVVEICASSSQPALVQLIVDALKEDAVRLCIDSNGNHVIQRALQYMPSEYNQFVFDAVCAECTVVGTHRHGCCVLQRCVDAANVVQKAEVIAQ-------VEAHAMKLMQDPYGNYVVQYVLDACSAADALGVMQKCVTHVFELSIQKFSSNVIEKCLELAPDGLRQTFVREIIACPRMYRMLQDQYANYVVQRALSVASEENCLALVAAIRPHLASMKN-------TQGGRRIQARILKRFPHLDVG 665
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BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Match: A0A0N7L824_PLAHL (Rna-binding protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L824_PLAHL)

HSP 1 Score: 243 bits (620), Expect = 2.150e-70
Identity = 131/297 (44.11%), Postives = 177/297 (59.60%), Query Frame = 0 
Query:    5 VEAVTERMPEAAVNLHGTRCVQKVVELC------------------------------RTDAQAAVIARSLGPSVVKLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQRCLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSREETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQGRIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGATSSGRRIAAKIIKRYPTVDLG 271
            +  V+  +  AA+NLHGTR VQKVVE+C                              RT +   +I  +L    V+L +D NGNHV+QRALQ M    N FV +A+      V  HRHGCCVLQRCLDAA    + ++I +       V R  +KLMQDP+GNYVVQYVL +C+ EE Y +   PLGH+  LS QKFSSNV+E CLE+A   ++ +++ E+    ++ +++ DQ+ANYVVQRAL V   ++ L LV AIRPHL +M+        TS GRRI A+I+KR+PT+D+G
Sbjct:  595 IRRVSSNLVAAALNLHGTRSVQKVVEVCALSPNVIENDYHEEDCEEMRFASQGESETRRTTSLPDLIVEALKDDAVRLCIDSNGNHVIQRALQFMKPEYNQFVFDAVCQECTTVGTHRHGCCVLQRCLDAANKRQKTEVIEQ-------VERQAMKLMQDPYGNYVVQYVLDSCTAEEAYGVILKPLGHIFELSIQKFSSNVIEKCLEKAPERVRQQYIAEITTCLKLNKMLQDQFANYVVQRALCVCAEDQCLLLVKAIRPHLAAMKN-------TSGGRRITARILKRFPTMDMG 877
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16139.3923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSX6_ECTSI8.890e-16590.25PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JG61_9PHAE1.570e-15989.89PUM-HD domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A3R7AAA0_9STRA2.190e-7749.26PUM-HD domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A7S2XV53_9STRA2.840e-7546.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1V9YPP5_9STRA1.080e-7350.57Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A833SFT8_PHYIN1.840e-7243.05Pumilio-family RNA binding repeat domain-containin... [more]
A0A6G0WN87_9STRA1.180e-7148.52Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1C9G3_PYTOL1.950e-7146.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485KML4_9STRA2.280e-7149.26Aste57867_9189 protein n=1 Tax=Aphanomyces stellat... [more]
A0A0N7L824_PLAHL2.150e-7044.11Rna-binding protein n=1 Tax=Plasmopara halstedii T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001313Pumilio RNA-binding repeatSMARTSM00025pum_5coord: 123..158
e-value: 0.17
score: 21.0
coord: 197..232
e-value: 0.037
score: 23.2
coord: 7..42
e-value: 59.0
score: 6.9
coord: 80..115
e-value: 3.2E-6
score: 36.7
coord: 159..194
e-value: 0.017
score: 24.3
coord: 44..79
e-value: 6.2E-5
score: 32.4
IPR001313Pumilio RNA-binding repeatPFAMPF00806PUFcoord: 81..109
e-value: 5.8E-6
score: 25.7
coord: 130..152
e-value: 1.2E-6
score: 27.9
coord: 162..189
e-value: 0.001
score: 18.7
coord: 200..225
e-value: 2.2E-5
score: 23.9
coord: 45..71
e-value: 2.8E-6
score: 26.7
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 7..42
score: 7.287
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 80..115
score: 9.784
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 159..194
score: 6.891
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 195..232
score: 9.667
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 123..158
score: 8.897
IPR001313Pumilio RNA-binding repeatPROSITEPS50302PUMcoord: 44..79
score: 9.807
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 4..271
e-value: 3.3E-76
score: 258.8
NoneNo IPR availablePANTHERPTHR12537:SF13PUMILIO HOMOLOGY DOMAIN FAMILY MEMBER 4coord: 6..257
NoneNo IPR availablePANTHERPTHR12537RNA BINDING PROTEIN PUMILIO-RELATEDcoord: 6..257
IPR033133Pumilio homology domainPROSITEPS50303PUM_HDcoord: 1..265
score: 59.96
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 7..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16139contigH-elongata_contig16139:957..4202 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16139.3923.1mRNA_H-elongata_contig16139.3923.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16139 957..4202 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16139.3923.1 ID=prot_H-elongata_contig16139.3923.1|Name=mRNA_H-elongata_contig16139.3923.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=282bp
MGFQVEAVTERMPEAAVNLHGTRCVQKVVELCRTDAQAAVIARSLGPSVV
KLSLDPNGNHVVQRALQHMPAPRNDFVLEAITDSLVQVAVHRHGCCVLQR
CLDAAGPDLRIKLINEASFLLPTVARNGLKLMQDPFGNYVVQYVLKTCSR
EETYHLCSAPLGHVASLSTQKFSSNVMEACLERAMPEIQAKFVEELAQQG
RIRELILDQYANYVVQRALTVAGNEEGLKLVAAIRPHLHSMQASITSLGA
TSSGRRIAAKIIKRYPTVDLGEEILMLMSRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001313Pumilio_RNA-bd_rpt
IPR011989ARM-like
IPR033133PUM-HD
IPR016024ARM-type_fold