prot_H-elongata_contig16136.3921.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16136.3921.1
Unique Nameprot_H-elongata_contig16136.3921.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length777
Homology
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: D7FT16_ECTSI (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT16_ECTSI)

HSP 1 Score: 347 bits (889), Expect = 2.420e-106
Identity = 194/315 (61.59%), Postives = 210/315 (66.67%), Query Frame = 0
Query:  494 GLTAAGEPSKPQG---------KPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQ---PTSENPFDPFLGPSSGAEETK--------------FSDEAFDKAEQPEIKTP-LPAV-----TKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHELLSWHEVVIS 776
            G TAAG+PS+  G         KPMARFVTDVSVADGSPLPPNTRF KTWCMRNDG + FP GCK++PVGGD+M+GPEDGV VE R PGEEFHVSV LTTP  SGRYIGYWRLRT EGQ FGHRVWADVLVTGGTADL+ EG+VDGDWDLVNMQRLSKAVEDT KD   AAA A               P     GQ   P S    D   G   G EE+K               +D   ++   P +  P  P+V     TKWHRELCSLAEMGFENT RN+ LLEKHV   G PGMERVLHELLSW EV I 
Sbjct:  271 GATAAGKPSRNSGDTGGNKSSAKPMARFVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPSGCKIVPVGGDLMAGPEDGVAVEQRGPGEEFHVSVPLTTPPLSGRYIGYWRLRTAEGQKFGHRVWADVLVTGGTADLVDEGTVDGDWDLVNMQRLSKAVEDTGKDDAAAAAAAVEPTAPENIPSTVQTPSY-APGQAWDPASAKAQDADSGADRGFEESKSXXXXXXXXXXXXSVADPLPEQQAAPVVVAPSAPSVPPTMATKWHRELCSLAEMGFENTQRNVQLLEKHVVNSGSPGMERVLHELLSWREVSIQ 584          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6H5JHM7_9PHAE (N_BRCA1_IG domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM7_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 2.090e-30
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = 0
Query:  512 FVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVS-VTLTTPMQSGR 590
            FVTDVSVADGSPLPPNTRF KTWCMRNDG + FP GCK++PVGGD+M+GPEDGV +E R PGEEFHVS VT  T   +GR
Sbjct:   44 FVTDVSVADGSPLPPNTRFVKTWCMRNDGPVTFPAGCKIVPVGGDLMAGPEDGVAIEQRGPGEEFHVSNVTSATGPITGR 123          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S3XSC8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSC8_HETAK)

HSP 1 Score: 131 bits (330), Expect = 8.870e-30
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 0
Query:  493 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 620
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:   74 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 198          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6S9FPI1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FPI1_HETAK)

HSP 1 Score: 131 bits (330), Expect = 1.430e-28
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 0
Query:  493 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 620
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:  255 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 379          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S4D636_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D636_HETAK)

HSP 1 Score: 131 bits (330), Expect = 5.710e-28
Identity = 65/128 (50.78%), Postives = 82/128 (64.06%), Query Frame = 0
Query:  493 RGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTA 620
            R   AA  P K + KPMARFV DV++ DG+ + P   F KTW MRNDG + FP G +L+ VGGD+M G    V      PGEEF + + L  P++ GRYIGYWRL+ PEG +FGHR+W DV V  G +
Sbjct:  464 RQPVAAAAPGK-KDKPMARFVADVTIPDGTEVAPGASFTKTWKMRNDGAVAFPAGARLVNVGGDLMEGAPRPVGAH--GPGEEFALGLELQAPLRPGRYIGYWRLQAPEGHHFGHRLWVDVRVAEGAS 588          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S1G709_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G709_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.020e-26
Identity = 65/132 (49.24%), Postives = 80/132 (60.61%), Query Frame = 0
Query:  497 AAGEPSKPQGKPM--ARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAEG 626
            AA EPS P   P   A FV  V+    + + P TRF K W +RN G + +P G +L+ VG   MSGP +GV VE   PG E  V+V LT P +SGR+  YWRL TP+G  FGHRVWADV+V    AD  A+G
Sbjct:   23 AAVEPSAPPAPPTFRAHFVEHVTFQVKTTVAPGTRFEKVWRLRNVGDVQWPEGTRLVHVGNHDMSGPTEGVAVEAAHPGAEVDVAVELTAPAESGRHYSYWRLVTPDGVRFGHRVWADVVVAD-AADPPADG 153          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A6H5JIQ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ9_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 2.270e-25
Identity = 80/161 (49.69%), Postives = 85/161 (52.80%), Query Frame = 0
Query:  637 MQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQ---PTSENPFDPFLGPSSGAEETKFSDEAF------------DKAEQPEIKTP-LPAV-----TKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHELLSWHEVVIS 776
            MQRLSKAVEDT KD   AAA A               P     GQ   P S    D   G   G EETK SDEA             ++   P +  P  P+V     TKWHRELCSLAEMGFENT RN+ LLEKHV   G PGMERVLHELLSW EV I 
Sbjct:    1 MQRLSKAVEDTGKDDTPAAATAVEPTAPDNIPTTVETPSY-APGQAWDPESAKTRDTDTGADRGFEETKSSDEATAGGDGVGYVAAPEQQAAPVVVAPSAPSVPPTMATKWHRELCSLAEMGFENTQRNVQLLEKHVVNSGSPGMERVLHELLSWREVSIQ 160          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: A0A7S3TLQ9_9SPIT (Hypothetical protein n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3TLQ9_9SPIT)

HSP 1 Score: 112 bits (281), Expect = 5.360e-22
Identity = 90/291 (30.93%), Postives = 135/291 (46.39%), Query Frame = 0
Query:  492 PRGLTAAGEPSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGV--TVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQN-FGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKDTKIAAADAAAVAXXXXXXXXXPAPGVNVVGQPTSENPFDPFLGPSSGAEETKF-SDEAFDKAEQPEIKTPLPAVTKWHRELCSLAEMGFENTTRNIALLEKHVAAPGKPGMERVLHEL-----LSWHEV 773
            PRG  A  +  KP  KP ARF++DVS+ +G+ + P T+F K W +RN G + +  G KL+ VGGD +S        +  P  PGEE  V+V +  P + GRY+GYWRL  P G+  FG RVW  + V    AD      +  D +L  +    K   + A+     A D A             AP ++        +   P   P     ET+  S +  D     E  +  P      + L  LA+MGFE+   N ++++KH+ + G   +++ + EL     L W E+
Sbjct:  408 PRGEEAPSKLEKPN-KPCARFISDVSIHEGTQMMPKTKFTKIWKIRNSGDVPWWPGSKLVFVGGDQLSADSSVPLPSAAPVQPGEEVDVAVDMEAPQEPGRYVGYWRLTGPMGRRKFGQRVWVHMQVV---ADPNEPTRIPSDEELCKLNDEMKLQREKAE-----ADDEADEGEDNTPPARTGAPSMDTADNAAVPSTSGPKPIPRKTPVETEEPSAQDADPCPSAEATSTPPVEVVKTKALDDLAQMGFEDEQLNASVIDKHMTSDGSLDLDKCVAELTDLADLEWDEM 689          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: D3B745_POLPP (ZZ-type zinc finger-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B745_POLPP)

HSP 1 Score: 110 bits (276), Expect = 1.110e-21
Identity = 52/111 (46.85%), Postives = 71/111 (63.96%), Query Frame = 0
Query:  505 QGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLV 615
            + K +AR+V+D++V DGS   PN  F K W +RNDG   +P    L+   GD +  P DG+TV+P  PG++  V + LTTP   GRYIGYW+L TPEG  FG R++ D+ V
Sbjct:  286 KNKHLARYVSDITVKDGSVFGPNVPFTKIWRIRNDGREAWPENSTLVWSSGDRLGSP-DGITVDPVLPGQDIDVGLNLTTPSAPGRYIGYWKLVTPEGLGFGQRLYVDIFV 395          
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Match: F4PSP5_CAVFA (ZZ-type zinc finger-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PSP5_CAVFA)

HSP 1 Score: 110 bits (275), Expect = 1.730e-21
Identity = 55/117 (47.01%), Postives = 72/117 (61.54%), Query Frame = 0
Query:  509 MARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKLMPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTPEGQNFGHRVWADVLVTGGTADLMAE 625
            ++R+V+D++  DGS L P   F K W +RNDG   +P    L  V GD MS P DGVTVEP  PG +  V++ L  P   GRYIGYW+L TPEG  +G R++ADV V G   ++  E
Sbjct:  324 LSRYVSDMATKDGSLLTPGQGFTKIWRLRNDGNQQWPENTTLSFVSGDRMSSP-DGVTVEPALPGNDVDVAINLVAPSTPGRYIGYWKLFTPEGNAYGQRLFADVYVEGKKEEVAVE 439          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16136.3921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FT16_ECTSI2.420e-10661.59N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JHM7_9PHAE2.090e-3075.00N_BRCA1_IG domain-containing protein n=1 Tax=Ectoc... [more]
A0A7S3XSC8_HETAK8.870e-3050.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6S9FPI1_HETAK1.430e-2850.78Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S4D636_HETAK5.710e-2850.78Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A7S1G709_9STRA2.020e-2649.24Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A6H5JIQ9_9PHAE2.270e-2549.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3TLQ9_9SPIT5.360e-2230.93Hypothetical protein n=3 Tax=Eukaryota TaxID=2759 ... [more]
D3B745_POLPP1.110e-2146.85ZZ-type zinc finger-containing protein n=1 Tax=Pol... [more]
F4PSP5_CAVFA1.730e-2147.01ZZ-type zinc finger-containing protein n=1 Tax=Cav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 504..620
e-value: 5.6E-33
score: 115.5
IPR032350Next to BRCA1, central domainPFAMPF16158N_BRCA1_IGcoord: 518..615
e-value: 5.0E-29
score: 101.0
NoneNo IPR availablePANTHERPTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDcoord: 145..752

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16136contigH-elongata_contig16136:2522..6203 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16136.3921.1mRNA_H-elongata_contig16136.3921.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16136 2513..6203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16136.3921.1 ID=prot_H-elongata_contig16136.3921.1|Name=mRNA_H-elongata_contig16136.3921.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=777bp
MVRFDSEQEFVAALHDLKSWKSCMRVEVTVLKTAPSSPTFRADTSTEAAK
RATDAATGEQRDGTVVSKVVEPFPSEGDSMISFVSDEAASSSATNSASTS
SAPSTISAAASTHSPEASVATEPPETLVLESRVPPLAAPSPAGSSASAAQ
SVASGDPLATTPTAQAKAFLTQVLPGLADVLARSMYAAQMMPNTMLPPSS
EASRNAEAFGPTAAGLAAAAATAAATAASMASSVSSVAENVRAAVDPSQF
TPSEAAQAPAYPSTAPPDYAPIPDEAPAAGNSRSSRSYTPAQTWRSRRSP
QLGGWGDGRRNCPRWMKDLARRQQQQEQLAGGMGYDLPLGVEVVRGAPPP
WCGPRMQRRKQDTASSAADGHKAVEDPVKKSETESNGIEAPTPPISVESS
NHCSTDVAHAVAESTSPEDANAVQAKSASKMVEKVDEVEKKPTNEDPNAV
FLTAVDAPEPPDYHDLLAASMRSLASSMSTSHSVNAAPQDKPRGLTAAGE
PSKPQGKPMARFVTDVSVADGSPLPPNTRFAKTWCMRNDGMMIFPHGCKL
MPVGGDIMSGPEDGVTVEPRAPGEEFHVSVTLTTPMQSGRYIGYWRLRTP
EGQNFGHRVWADVLVTGGTADLMAEGSVDGDWDLVNMQRLSKAVEDTAKD
TKIAAADAAAVAAADTSTAAAPAPGVNVVGQPTSENPFDPFLGPSSGAEE
TKFSDEAFDKAEQPEIKTPLPAVTKWHRELCSLAEMGFENTTRNIALLEK
HVAAPGKPGMERVLHELLSWHEVVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR032350N_BRCA1_central