prot_H-elongata_contig161343.3919.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig161343.3919.1
Unique Nameprot_H-elongata_contig161343.3919.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length57
Homology
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: A0A6H5KTA2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTA2_9PHAE)

HSP 1 Score: 88.2 bits (217), Expect = 5.180e-19
Identity = 42/53 (79.25%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    5 QVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIGNSYPEVCQ 57
            +VPLEQYFTSDYRE +RDER NV+DAFTQ PPHLAQTG LVD IGN+YPE  Q
Sbjct:  664 KVPLEQYFTSDYRELLRDERHNVVDAFTQQPPHLAQTGLLVDHIGNAYPEDVQ 716          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: D8LEP1_ECTSI (WD-repeat protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP1_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 2.350e-15
Identity = 37/45 (82.22%), Postives = 40/45 (88.89%), Query Frame = 0
Query:    5 QVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIG 49
            +VPLEQYFTSDYRE +RDER NV+DAFTQ PPHLAQTG LVD IG
Sbjct:  957 KVPLEQYFTSDYRELLRDERHNVVDAFTQQPPHLAQTGLLVDHIG 1001          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: A0A2P6V8F8_9CHLO (WD40 YVTN repeat-like-containing domain,Bromodomain isoform n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V8F8_9CHLO)

HSP 1 Score: 59.7 bits (143), Expect = 5.580e-9
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
Query:    2 LIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLV-DLIGNSYPEVCQ 57
            L+A+ P +Q+F++DY   +RD + NVLDA TQLPPH+    + V D +GN YPE  Q
Sbjct:  823 LLARAPYDQFFSTDYNPLLRDLQHNVLDAVTQLPPHVLTGAEAVCDALGNPYPEPLQ 879          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: E1ZD54_CHLVA (Bromo domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZD54_CHLVA)

HSP 1 Score: 57.4 bits (137), Expect = 3.650e-8
Identity = 30/65 (46.15%), Postives = 38/65 (58.46%), Query Frame = 0
Query:    2 LIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHL---------AQTGQLVDLIGNSYPEVCQ 57
            L  + P +Q+F+SDY   +RD + NV+DA TQLPPHL         A  G L D +GN YPE  Q
Sbjct:  811 LFGRAPYDQFFSSDYSPLMRDLQHNVVDAETQLPPHLLEGKAGRECAARGALCDALGNPYPEPLQ 875          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: A0A7S1T5X7_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5X7_9CHLO)

HSP 1 Score: 50.4 bits (119), Expect = 7.730e-6
Identity = 23/49 (46.94%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    9 EQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIGNSYPEVCQ 57
            +Q+  +DY   +RD R NVLDA +Q+PPHL    QLV++    YPE  Q
Sbjct:   76 DQFLATDYAHLLRDSRGNVLDADSQVPPHLMPPQQLVNMSSTPYPEPYQ 124          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: A0A2P6TLB7_CHLSO (Bromodomain and WD repeat-containing 1-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TLB7_CHLSO)

HSP 1 Score: 50.4 bits (119), Expect = 1.030e-5
Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    2 LIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQ--LVDLIGNSYP 53
            L+++ P +Q+ T+DY   +RD   NV+DA TQLPPH+  TG+  L D +G  YP
Sbjct: 1052 LLSRAPYDQFLTTDYSPLLRDLHHNVVDAETQLPPHIL-TGREALCDALGTPYP 1104          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: UPI001E689B75 (bromodomain and WD repeat-containing protein 1 n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E689B75)

HSP 1 Score: 48.1 bits (113), Expect = 6.740e-5
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    2 LIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIGNSYP 53
            L+AQ+P E +F +DYR   RD     LD  T+LPPHL     LVD+ G  +P
Sbjct:  519 LLAQLPTELFFHTDYRPLARDALGGALDEQTELPPHLMPPPFLVDVEGAPHP 570          
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Match: UPI001568741B (LOW QUALITY PROTEIN: bromodomain and WD repeat-containing protein 1 n=1 Tax=Aphantopus hyperantus TaxID=2795564 RepID=UPI001568741B)

HSP 1 Score: 48.1 bits (113), Expect = 6.740e-5
Identity = 24/52 (46.15%), Postives = 31/52 (59.62%), Query Frame = 0
Query:    2 LIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIGNSYP 53
            L+AQ+P E +F +DYR   RD     LD  T+LPPHL     LVD+ G  +P
Sbjct:  556 LLAQLPTELFFHTDYRPLARDALGGALDEQTELPPHLMPPPFLVDVEGAPHP 607          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig161343.3919.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5KTA2_9PHAE5.180e-1979.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEP1_ECTSI2.350e-1582.22WD-repeat protein, putative n=1 Tax=Ectocarpus sil... [more]
A0A2P6V8F8_9CHLO5.580e-949.12WD40 YVTN repeat-like-containing domain,Bromodomai... [more]
E1ZD54_CHLVA3.650e-846.15Bromo domain-containing protein n=1 Tax=Chlorella ... [more]
A0A7S1T5X7_9CHLO7.730e-646.94Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
A0A2P6TLB7_CHLSO1.030e-546.30Bromodomain and WD repeat-containing 1-like n=1 Ta... [more]
UPI001E689B756.740e-546.15bromodomain and WD repeat-containing protein 1 n=1... [more]
UPI001568741B6.740e-546.15LOW QUALITY PROTEIN: bromodomain and WD repeat-con... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig161343contigH-elongata_contig161343:159..329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig161343.3919.1mRNA_H-elongata_contig161343.3919.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig161343 159..329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig161343.3919.1 ID=prot_H-elongata_contig161343.3919.1|Name=mRNA_H-elongata_contig161343.3919.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=57bp
MLIAQVPLEQYFTSDYREPIRDERDNVLDAFTQLPPHLAQTGQLVDLIGN
SYPEVCQ
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