mRNA_H-elongata_contig16092.3898.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig16092.3898.1
Unique NamemRNA_H-elongata_contig16092.3898.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: D8LBE8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBE8_ECTSI)

HSP 1 Score: 509 bits (1311), Expect = 3.340e-164
Identity = 381/674 (56.53%), Postives = 449/674 (66.62%), Query Frame = 1 
Query:  367 EGSRRNAIEYRSDSPTSRHDGARPGDGDATHGSGGRSRGARNDEYGRGAQSDDDGDNDNLKGDPESSPRRALSSSRGPTIVISLGTVALYRHTCTFLPIPQDEFALISVPLDTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKANIGSNTSLERGEALRGKRYNRGAKGGPASMGSNSGSGDERKPTSRSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRHRNRAAAADDGSDFDEAEHEEHXXXXXXXXXRYNRIRNTARSGRPFTAAKPRSMNRSGGR--------------------DRYGGGEHVKSSGRMSITYTRREGGGXXXXXXXX-EYDKIKDRERARERADYPSKGAIGKDRDGMKGDGFTSASRNRERDSEVGGSRSKRREVGNYFASGVDSDDRL-ASGSTRDRVDRSKDKNGSQASGKKDEAMIKSSWAAQMLKAKDRPNLVHWRDELVAITKDSSEDFEDATLSVELMKMRCDVCYHEKADGDKFCWNADCWMSPVFNGYFKAERDNNRNGMNNPSPHRAGYINTFGRETIIDSSLTSALQAPVWWIETKRKRKLEAHEVLSEDPALYRWQCWASGVHDPNSRDPTFINEAQFEAEGCNEKA----TTLAPGPARNTSGTRLPHE 2310
            EGSRRN  + R +       GAR GDGDAT+G+  R+RG R D   RGA S+DD DN++ K D +   R  LSS+         G     R         +DEF LISVPLDTWVGR+VRITTPRHNGTTGLVHRTGNGWVNLQT+LGDVAKRAYDLVVIP+E+ANIGS   + + +A RGKRY  G KGG A++GSNSGSG           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                F+       XXXXXXXX RY+              AK R+++R GGR                    DRYGGGE VKSSGRMSIT+TR++GGG         EYD++  RE          KG  G+DRDGMKGD F    R++E+DS+VGGSR+KRR+V ++ ++G DS+D++ A GS R+RVDRS +K    A+ KKDE +IKSSW  QM KAK+RPNLVHWRDELVAITKDSSEDFEDATLSVELM++RCDVCYHEK+DGDKFCWN  CWMSPVF+GY      N+      P    AGYINTFGRET+ID +LTSALQAPV W+ETKRKRKLEAHEV SEDPALYRWQCWAS   +PNS+DPTF+ + +F A G  + A       +  P+  + G  + H+
Sbjct:    2 EGSRRNIADDRGE-------GARSGDGDATNGAS-RNRGLRQDHPERGAASEDD-DNEDSKADSDGIRRGPLSSASDRP----KGHATSDR---------KDEFPLISVPLDTWVGRFVRITTPRHNGTTGLVHRTGNGWVNLQTALGDVAKRAYDLVVIPEERANIGSIGGMLKADAARGKRYRGGPKGG-AAVGSNSGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------FEXXXXXXXXXXXXXXXHRYD------------GGAKMRNVSRGGGRGFPXXXXXXXXXXXXXREKGDRYGGGEPVKSSGRMSITFTRQDGGGGAKQRGRGGEYDRM--REXXXGGRGEALKGGAGRDRDGMKGDSFLPIGRHKEKDSDVGGSRAKRRDVISHCSAG-DSEDKVGAGGSYRERVDRSSNK--LVAANKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDATLSVELMRVRCDVCYHEKSDGDKFCWNEKCWMSPVFSGYCHTGA-NDEVIAPTPVQQSAGYINTFGRETLIDPALTSALQAPVKWLETKRKRKLEAHEVFSEDPALYRWQCWASLSKNPNSKDPTFVEDPRFRAAGRGDSADNGRNVSSSKPSPESGGDMVRHD 625
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A6H5JHP0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP0_9PHAE)

HSP 1 Score: 378 bits (971), Expect = 4.160e-116
Identity = 308/534 (57.68%), Postives = 360/534 (67.42%), Query Frame = 1 
Query:  316 PAARVSTERNMPTRVAAEGSRRNAIEYRSDSPTSRHDGARPGDGDATHGSGGRSRGARNDEYGRGAQSDDDGDNDNLKGDPESSPRRALSSSRGPTIVISLGTVALYRHTCTFLPIPQDEFALISVPLDTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKANIGSNTSLERGEALRGKRYNRGAKGGPASMGSNSGSGDERKPTSRSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTRHRNRAAAADDGSDFDEAEHEEHXXXXXXXXXRYN---RIRNTARSG-RPFTAA-KPRSMNRSGGR---DRYGGGEHVKSSGRMSITYTRREGGGXXXXXXXX-EYDKIKDRERARERADYPSKGAIGKDRDGMKGDGFTSASRNRERDSEVGGSRSKRREVGNYFASGVDSDDRL-ASGSTRDRVDRSKDKNGSQASGKKDEAMIKSSWAAQMLKAKDRPNLVHWRDELVAITKDSSEDFEDATLSVELMKMRCDVCYHEKA 1887
            PA RV  ERN+P RV+ EGSRRN  + R +       GAR GDGDAT G+  R+RG R D   RGA S+DD DN++ K D +   R  LSS+               R         +DEF LISVPLDTWVGR+VRITTPRHNGTTGLVHRTGNGWVNLQT+LGDVAKRAYDLVVIP+E+AN+GS   + + +A RGKRY  G KGG A++GSNSGSGDERK    SRN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                        H         RY+    +RN +R G R F    + R+M + G R   DRYGGGE VKSSGRMSIT+TR++GGG         EYD++  RE          KG  G+DRDGMKGD F    R++E+DS+VGGSR+KRR+V ++ A+G DS+D+L A GS R+RVDRS +K    A  KKDE +IKSSW  QM KAK+RPNLVHWRDELVAITKDSSEDFED TLSVELM++RCDVCYHEK+
Sbjct:    9 PATRVPPERNVPARVSMEGSRRNIADDRGE-------GARSGDGDATTGAS-RNRGLRQDHPERGAASEDD-DNEDSKADSDGIRRGPLSSASD-------------RPKGHATSDSKDEFPLISVPLDTWVGRFVRITTPRHNGTTGLVHRTGNGWVNLQTALGDVAKRAYDLVVIPEERANVGSIGGMLKADAARGKRYRGGPKGG-AAVGSNSGSGDERKGGGPSRNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH---------RYDGGANMRNVSRGGGRGFPGGGRSRTMAKGGVREKGDRYGGGEPVKSSGRMSITFTRQDGGGGAKQRGRGGEYDRM--REXXXGGRGEALKGGAGRDRDGMKGDNFIPIGRHKEKDSDVGGSRTKRRDVISHSAAG-DSEDKLGAGGSYRERVDRSSNK--LVAVNKKDEEVIKSSWVHQMQKAKERPNLVHWRDELVAITKDSSEDFEDVTLSVELMRVRCDVCYHEKS 505
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A835Z2T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T4_9STRA)

HSP 1 Score: 127 bits (319), Expect = 3.390e-26
Identity = 69/206 (33.50%), Postives = 98/206 (47.57%), Query Frame = 1 
Query: 1726 WAAQMLKAKDRPNLVHWRDELVAITKDSSEDFEDATLSVELMKMRCDVCYHEKADGDKFCWNADCWMSPVFNGYFK------------------------------AERDNNRNGMNNPSPH--RAG----------------YINTFGRETIIDSSLTSALQAPVWWIETKRKRKLEAHEVLSEDPALYRWQCWASGVHDPNSRD 2199
            W  Q+ + ++RPNL HWRD++ A  ++  +D E   L+ +LM +RC VCY EK DGD+FCWN++C  SP+F  + K                               ++D +    +  +P   R+G                Y NTF R T++D +L   L APV W+E KR++           PALYRWQCWAS   DP   D
Sbjct:  569 WDVQIQRGRERPNLTHWRDQIDASAREPDQDPEAVDLNFDLMPLRCCVCYVEKPDGDRFCWNSECLASPIFEEFVKPIPGVPSASLVKEDHKDASKGFGGGDKSVGVKKDPDAMDTDEGAPRAQRSGSLTTKGEEGDEEKKLPYENTFKRTTLVDDALAYVLHAPVKWLEAKRRKGTPFESFSLASPALYRWQCWASLEDDPAVSD 774
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A7R9UGB2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGB2_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 7.650e-8
Identity = 30/64 (46.88%), Postives = 41/64 (64.06%), Query Frame = 1 
Query:  667 QDEFALISVPLDTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEK 858
                 L +V  D W+ + VRI   R  G TG V R+GNGWV LQT++G+VAKRAY+L ++P  +
Sbjct:  104 HGSMLLSAVDADVWINKLVRIKGGRFTGHTGRVLRSGNGWVQLQTAMGEVAKRAYELQLLPSSE 167
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A6U4F2P5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F2P5_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 2.040e-7
Identity = 34/81 (41.98%), Postives = 51/81 (62.96%), Query Frame = 1 
Query:  682 LISVPLDTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKANIGSNTSLERGEALRGKRYNR 924
            L +V  +TW  + V+I   R  G TG V R+GNGWV LQT++G+VAKRAY+L ++P  + N     S   G++ + ++ NR
Sbjct:  100 LSTVDAETWNNKMVKIKAGRFTGHTGRVLRSGNGWVQLQTAMGEVAKRAYELQLLPASEQN--KQPSGPSGDSEKSRKRNR 178
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A7S3M8E2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8E2_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.020e-6
Identity = 26/58 (44.83%), Postives = 39/58 (67.24%), Query Frame = 1 
Query:  700 DTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKANIGS 873
            ++WVG+ V++ + RH G  G V  +GNGWV ++TS+G+VAKRAY+L V+        S
Sbjct:  207 ESWVGQRVQVASGRHAGQQGTVVSSGNGWVQIETSVGEVAKRAYELQVVSHHSGGAAS 264
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BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Match: A0A7S4E8A6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E8A6_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.250e-5
Identity = 25/58 (43.10%), Postives = 40/58 (68.97%), Query Frame = 1 
Query:  688 SVPLDTWVGRYVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKA 861
            +V  + WVG +VR+   R  G  G + R+GNGWV L+T+ G++AKRAY+L ++ ++ A
Sbjct:  191 AVDAERWVGTHVRVRVGRLGGQVGRILRSGNGWVQLRTARGEIAKRAYELELVDEKDA 248
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16092.3898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LBE8_ECTSI3.340e-16456.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JHP0_9PHAE4.160e-11657.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z2T4_9STRA3.390e-2633.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7R9UGB2_9STRA7.650e-846.88Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6U4F2P5_9STRA2.040e-741.98Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3M8E2_9STRA6.020e-644.83Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4E8A6_9STRA2.250e-543.10Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16092contigH-elongata_contig16092:1214..6965 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons9
Model size3362
Cds size2370
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929943.8361375-UTR-H-elongata_contig16092:1213..19381622929943.8361375-UTR-H-elongata_contig16092:1213..1938Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16092 1214..1938 -
1691679217.707858-UTR-H-elongata_contig16092:1213..19381691679217.707858-UTR-H-elongata_contig16092:1213..1938Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16092 1214..1938 -
1622929944.007282-UTR-H-elongata_contig16092:6698..69651622929944.007282-UTR-H-elongata_contig16092:6698..6965Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16092 6699..6965 -
1691679217.8278925-UTR-H-elongata_contig16092:6698..69651691679217.8278925-UTR-H-elongata_contig16092:6698..6965Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig16092 6699..6965 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929943.8466105-CDS-H-elongata_contig16092:1938..23281622929943.8466105-CDS-H-elongata_contig16092:1938..2328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 1939..2328 -
1691679217.7274783-CDS-H-elongata_contig16092:1938..23281691679217.7274783-CDS-H-elongata_contig16092:1938..2328Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 1939..2328 -
1622929943.863934-CDS-H-elongata_contig16092:2578..27431622929943.863934-CDS-H-elongata_contig16092:2578..2743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 2579..2743 -
1691679217.7408266-CDS-H-elongata_contig16092:2578..27431691679217.7408266-CDS-H-elongata_contig16092:2578..2743Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 2579..2743 -
1622929943.8758535-CDS-H-elongata_contig16092:3055..32501622929943.8758535-CDS-H-elongata_contig16092:3055..3250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3056..3250 -
1691679217.7532258-CDS-H-elongata_contig16092:3055..32501691679217.7532258-CDS-H-elongata_contig16092:3055..3250Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3056..3250 -
1622929943.8979979-CDS-H-elongata_contig16092:3561..37471622929943.8979979-CDS-H-elongata_contig16092:3561..3747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3562..3747 -
1691679217.7618532-CDS-H-elongata_contig16092:3561..37471691679217.7618532-CDS-H-elongata_contig16092:3561..3747Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3562..3747 -
1622929943.9223738-CDS-H-elongata_contig16092:3889..45161622929943.9223738-CDS-H-elongata_contig16092:3889..4516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3890..4516 -
1691679217.7699845-CDS-H-elongata_contig16092:3889..45161691679217.7699845-CDS-H-elongata_contig16092:3889..4516Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 3890..4516 -
1622929943.942427-CDS-H-elongata_contig16092:5356..54961622929943.942427-CDS-H-elongata_contig16092:5356..5496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 5357..5496 -
1691679217.7782614-CDS-H-elongata_contig16092:5356..54961691679217.7782614-CDS-H-elongata_contig16092:5356..5496Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 5357..5496 -
1622929943.9635384-CDS-H-elongata_contig16092:5704..60501622929943.9635384-CDS-H-elongata_contig16092:5704..6050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 5705..6050 -
1691679217.787207-CDS-H-elongata_contig16092:5704..60501691679217.787207-CDS-H-elongata_contig16092:5704..6050Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 5705..6050 -
1622929943.9798982-CDS-H-elongata_contig16092:6199..63601622929943.9798982-CDS-H-elongata_contig16092:6199..6360Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 6200..6360 -
1691679217.8039582-CDS-H-elongata_contig16092:6199..63601691679217.8039582-CDS-H-elongata_contig16092:6199..6360Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 6200..6360 -
1622929943.9954264-CDS-H-elongata_contig16092:6538..66981622929943.9954264-CDS-H-elongata_contig16092:6538..6698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 6539..6698 -
1691679217.8177388-CDS-H-elongata_contig16092:6538..66981691679217.8177388-CDS-H-elongata_contig16092:6538..6698Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig16092 6539..6698 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16092.3898.1prot_H-elongata_contig16092.3898.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig16092 1939..6698 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig16092.3898.1

>prot_H-elongata_contig16092.3898.1 ID=prot_H-elongata_contig16092.3898.1|Name=mRNA_H-elongata_contig16092.3898.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=790bp
MANSPPTTGSNSDHLTPAARVSTERNMPTRVAAEGSRRNAIEYRSDSPTS
RHDGARPGDGDATHGSGGRSRGARNDEYGRGAQSDDDGDNDNLKGDPESS
PRRALSSSRGPTIVISLGTVALYRHTCTFLPIPQDEFALISVPLDTWVGR
YVRITTPRHNGTTGLVHRTGNGWVNLQTSLGDVAKRAYDLVVIPKEKANI
GSNTSLERGEALRGKRYNRGAKGGPASMGSNSGSGDERKPTSRSRNSRSN
VNTGNNSSSEGDEGDSSGQDDNDDGDGDEHDNRGRPTRHRNRAAAADDGS
DFDEAEHEEHDEDDGENDERYNRIRNTARSGRPFTAAKPRSMNRSGGRDR
YGGGEHVKSSGRMSITYTRREGGGGKGRSRANEYDKIKDRERARERADYP
SKGAIGKDRDGMKGDGFTSASRNRERDSEVGGSRSKRREVGNYFASGVDS
DDRLASGSTRDRVDRSKDKNGSQASGKKDEAMIKSSWAAQMLKAKDRPNL
VHWRDELVAITKDSSEDFEDATLSVELMKMRCDVCYHEKADGDKFCWNAD
CWMSPVFNGYFKAERDNNRNGMNNPSPHRAGYINTFGRETIIDSSLTSAL
QAPVWWIETKRKRKLEAHEVLSEDPALYRWQCWASGVHDPNSRDPTFINE
AQFEAEGCNEKATTLAPGPARNTSGTRLPHEGNRFRGYEDLTDSERGTKE
RIGKGPTLESGLEALEVAHSRSGLRGNASGMFSGASTSHRTSRSAEDDLR
GHRFGLIDSRPMDPEGSEAGGNRQSVSLRRDVGGGRPWS*
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mRNA from alignment at H-elongata_contig16092:1214..6965-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig16092.3898.1 ID=mRNA_H-elongata_contig16092.3898.1|Name=mRNA_H-elongata_contig16092.3898.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5752bp|location=Sequence derived from alignment at H-elongata_contig16092:1214..6965- (Himanthalia elongata Himel1 dioecious)
CAGGCAGGAAACGGCATACCCGCGAGGCCACACGGTGCGCCTTGAGCCCG
AACAAGAGTCCTCAACGCTGCGCTTGTTTTGAGCTGTGACGAAAATAATA
CCACACAGTACAGAGCCTGACTGCGCCAGATATAAGCGAGTATATGTGGT
GGGTGACCCGTGGACAGAGATCTTCTACCTAAAACTGACAAAATTTGAAG
TAGCCTGCAGACGACAGCAGCAACCACACCAGCAGCAACAACAGTATCAG
CAACCACACTAGCCAGCATGGCCAATTCACCGCCCACAACAGGTTCGAAC
TCGGACCACCTCACACCTGCAGCAAGAGTCTCTACCGAGCGCAACATGCC
GACTCGTGTCGCGGCTGAGGGCTCTAGGCGCAATGCCATCGAATATAGGA
GCGATTCTCCAACCTCCCGGCATGACGGTGAGAGGCAGATTGTCCATGGT
CACCCTTCTACATGGGATCTGCAGCAACTCGCGCTACCTACACGTACTTG
GTCCTTGATGTAGTGTTATTGGTGTTTTTCATACTGTTATCCGCTGTCCT
TTGCACTGTTGTGTCTCACGTAATTGCTCGGTTTGTGGCTATTTGCCCTT
TCCAGGGGCAAGGCCAGGTGACGGTGATGCCACACATGGTAGCGGTGGTC
GCAGTAGGGGAGCAAGGAACGATGAGTATGGACGAGGAGCGCAATCCGAT
GATGACGGAGACAACGACAATTTGAAGGGTGACCCCGAAAGCTCGCCTCG
AAGGGCACTCTCATCGGTGAGGAGAGATGAGAAACAAGCAAAATACTACA
CCATTTTACTGGGGTACTCGAAACGAATGAGCACACTGAACATTCCACAA
GCGTCACCTGGTAGGAGGTACATATTAGTTCATTTAAAATTAAAACCCTC
CGAGCATCCACGCAGTCCAGGGGACCAACTATCGTGATATCCCTTGGCAC
CGTGGCATTGTATCGACACACTTGCACTTTTCTGCCTATCCCACAGGATG
AATTCGCGCTCATCTCTGTCCCACTCGACACGTGGGTTGGGAGATACGTC
CGAATCACTACCCCGAGACACAACGGCACGACGGGTCTGGTTCACCGGAC
AGGTAACGGCTGGGTCAACCTACAAACATCTCTGGGAGATGTCGCCAAGC
GAGCTTACGATCTCGTCGTCATCCCGAAGGAGAAGGCCAACATAGGTTCC
AACACCTCTTTGGAGAGAGGAGAGGCCTTGCGCGGGAAGAGATACAATAG
GGGCGCGAAAGGTTTGAAGGATAATCTGCTGCAGTCAGCTTCTCCCTACT
CTTATCCCGACAAAATATTGAATCGGGTTTTTTACCCCGTATCGTTCTCT
TTGGAATACCGAACACACGTCACATGACCGAAGACTGGTTGGAGGGACAT
TTTCTATCTTCGTGCGAATAATCACAACATCATACTGTACCGGTGATAAA
ATATCGCATCACCCTCCAGGTGGTCCGGCAAGCATGGGTAGTAATTCGGG
CTCAGGAGATGAGCGGAAACCAACTTCCAGGAGTCGTAACTCACGCTCGA
ATGTGAACACAGGAAACAACTCAAGCTCTGAAGGCGATGAAGGCGATTCC
AGTGGCCAGGTGGGAGACGTGAGAAGTGAGAAGGCGATTCTTTGTTTCTT
CTCGGAATGTTGTTTTAACTGACTGATTGGATGACTATACACAAGGAGAG
AGAGGTTGTTGCAGCTCTAAAAATACTGCTCGAATTATGTGCAGTCCCTG
AGGATAGTATTATATTATAATAATCCTTTTGAATTTTAGGTTGCGGTGTC
ATAGCGCCCGTCTTCTCTGTTTTACCCTTTATACTTTATATCCTGTACTG
TCTTACGTGTGGTATGATGGGGGAACCGGGAAAATTTCGATAATGCGGTA
CGATCGGCGAGAAACTGACTACAGAGATCGAGTGTACACTGCGGCTTCAG
CAGCAGTTGCTGGAACGGTTCGTGTTTGGATCCTTCTTGTTGGCGAGGAC
TGCCTCAAAATGCATGATCACTCGCTACATGCTACAGTATGTCCAACCCT
TCCCACACACAGTTCACTCCCTTTACTCTGGTTTGTCCTCCTCATATGAT
AAATAATGAATAATCACATTTGACAATTTTGTCCTTAAATGTTGACAAAA
TGTCCATATTCGAACCTGATGATAGTTGGTCCCCTGGACTACACCTCCCA
TGGTGCTAAGAAGGCGTGGATTTTGTTTTTTCATTATATAGACGTGCCCC
GATATCTGCTTTTATCTATAAAATACTACATCACGTGACGTTTGTAATAT
TACTTTCATACGAGAATTGAATAACAGCTATGTAGCAGGAGCGACTTTGC
TTCACTCGACGCGATTCTATGCGATGCAATTTGGAGATGATACAGTCAAG
GTGCATCTCTAGTGACATGCAAATACTCAAATGTTCACATCTCTTTCAGG
ATGATAACGACGACGGAGACGGAGACGAGCATGACAACAGAGGTCGTCCT
ACTCGCCATAGGAACAGGGCTGCCGCCGCGGACGACGGCAGCGACTTCGA
TGAGGCTGAACACGAAGAACACGATGAAGATGACGGTGAAAACGATGAGC
GCTACAACAGGATACGAAACACCGCTAGGAGTGGCAGGCCTTTCACTGCC
GCTAAGCCTCGCTCAATGAACAGAAGCGGAGGCAGGGATAGGTACGGAGG
CGGCGAACACGTAAAGTCGTCCGGCAGAATGTCGATCACGTACACTCGTC
GCGAAGGAGGGGGTGGCAAGGGGAGGAGTAGGGCTAACGAATACGACAAA
ATAAAAGACCGGGAGCGTGCCAGGGAGAGGGCGGACTACCCGTCCAAGGG
TGCCATCGGCAAGGATAGAGACGGAATGAAGGGGGATGGCTTCACGTCTG
CCTCGAGGAACAGGGAGCGAGACTCCGAGGTGGGAGGATCTCGTTCCAAG
CGAAGAGAGGTGGGAAATTATTTCGCCTCGGGTGTCGACTCCGATGATAG
GCTAGCTTCCGGTTCAACTCGAGATCGCGTGGACCGCTCCAAGGATAAGA
ATGGCTCCCAAGCTTCGGGCAAGAAGGTGCATGTCAAGGTCTCAAAACTT
ATATTTTGAAAGATGGCAGTAAAAAGGGACTCCGTTTGTGACCGTTTCGC
ACGATCAAGCGGTCATACGCGATTCGTTCGTTGCTAATCCCAGCACCCCG
CCTGATTCTGTTTCCTAGGACGAAGCGATGATCAAGTCATCGTGGGCGGC
ACAAATGCTGAAAGCTAAGGATCGCCCGAATCTAGTCCACTGGCGTGACG
AACTAGTAGCGATAACAAAAGACAGCAGCGAAGACTTCGAAGACGCCACC
CTCAGCGTCGAGCTCATGAAAATGCGATGTGATGTATGCTATCATGAGAA
AGCGGTGAGGATCCGAGACGTGTCTTGTGCCTCGCATCTATGGGACCTAC
GTATCGAGTAGCTTGTGGAGAGGCTATCCGGTATTACCTTACTGGAAAAC
GTTTTCAGCAGATTACATTGTTGACGCTCGCGTTTAAAAGGGTCGGTAAA
GACAAAGGCTTAATGATTATTAATATTTGTGATTATTCGCTACTCGAAGA
AACGTTGGGACGCTCAGTCTTGAAGCTCTTGTCTTTGAAGCCATATTATT
ACCGACTTACTTTTGACATCAACATCCTTTTGTTTCGATTATGTTTTGAT
ATCCATCGCGTTCAGGACGGCGACAAATTCTGCTGGAATGCAGATTGCTG
GATGTCACCTGTCTTCAATGGCTACTTCAAGGCGGAAAGGGACAACAATA
GAAACGGCATGAACAACCCGTCACCTCACAGGGCGGGATACATCAACACT
TTCGGGAGAGAAACGATTATTGATTCTTCGCTGACCAGCGCTTTGCAGGC
GCCTGTATGGGTGAGTTACTGGGGTCGGCATGCAGAAAAAAGGCGCCGGG
CCCTGGTTCCGAGATGATGTGTTATTGATAGCTATTAACCGTACCGTACC
ATGAAGTTTGACCAGCATATAATGATATTGAGATGCCCAGATTTAGCGAG
GTATAAGCTAAAATAGTCTGACGATTAAGTAATCAATTAAGGGATTTGTA
GAACAGCATTTCGCTCTCGGATAAAGTTACAGTACCTGCAGTTGCTTGCC
GTGCCGTGCTAAAGAGTCGATGACGCCTCCCGTCCTCGCGCATACCTCCT
AATAAATCGTGCACTACGCCAGTGGATTGAAACCAAGAGGAAGCGCAAGC
TTGAGGCGCACGAAGTTTTGTCCGAAGACCCAGCCCTCTACCGCTGGCAG
TGCTGGGCATCGGGCGTACATGACCCCAACTCAAGAGATCCCACCTTCAT
CAACGAAGCGCAGTTTGAGGCTGAAGGCTGCAACGAGGTCCGTCGTGTTA
AGAGTGGAGGGCATGCTGGTCACCTTATTTTCACTATTCTAGAGTTAGGG
GGCCTTCATAAATTTAATTGCTAGTTTTAACTCTCATTTCTGTGGAGGCG
GACACTTTCTCACACTCTTACTGCTCTAATGGCTGGGATATCCTATTTAT
CATACACTCTTGAGTGTGTGTAGCCTAGTACATTCTTGGTGATCGTTTTT
TTTCTTTACCTTCTTTTTATATTCCTTCGATTCGCAGAAAGCGACAACTT
TGGCTCCAGGTCCCGCTCGCAATACGTCTGGGACGAGGCTACCGCACGAA
GGGAATCGGTTTAGGGGTTACGAGGACCTCACCGACTCCGAGCGTGGGAC
CAAGGAGCGTATCGGCAAGGGTCCCACTCTTGAGAGTGGACTGGAAGCGT
TGGAAGTCGCCCACTCGCGCTCGGGCCTAAGAGGCAACGCTTCGGGAATG
TTTAGTGGAGCCTCCACGTCGCACAGGACCAGTCGGTCTGCTGAAGATGA
CCTCCGTGGTCACCGATTCGGTCTCATTGACAGCCGTCCAATGGACCCGG
AAGGAAGTGAGGCGGGTGGGAATCGGCAGAGTGTATCGCTCAGGCGTGAT
GTCGGCGGGGGTCGCCCGTGGTCGTGATAAATGATATTGCACCAGCCGTG
AGGCAGTCGTGGTGCGCTTAACACAGTAGCAGAGGAGTTTACGCGCTGCA
GCGTTGTCCGGGCGTGAGGTCTGATGGTTTTAGTGTAATGTGGTGTGGTG
TGGCGTGCTGTTCTAGAGTTTCCTGGGTGCGAAATTGTCAGGGTGTACGG
TTCCGGGCAAATCAAGGCAGTTTCTCGTACGTTGTACAGCACGACTTCAG
GGGTACAGCATCAAGTTCCAAAGCGAAGAACATCGCACAGGACAGGACGT
ACCCATGTATGAAATGCGGTGGTATATATTTTCTGGTGTGCATTGCGGTA
CATTCATGAGTTTGAGAAGATAAAAACGTCAGGAAGATGTGAGTCGATTA
TTGTTGGAATTGCTTTCAAGAGTTCTTTTTGGTCGCAATAAACCGAGGAA
AGTAAAAAATTATGTCGAAAACGAAAGCATCATGCCGGGTGGAACCTTCT
TGGAAGTATTCGTACAGATAGTTAAGTGTTGGTTATGTACTACATACAGA
AATACAAAGCAGCTTTTGTGTTGGAGGTATCGTAAGAAACGGTAATATCT
ATTCCGCGCAAAAGCCTCACGGGCTTCGCGATCACAAGTTGCAAGATACC
ATTAGATTCATATGAGGTACATGAGGACTGGGCTGCGAGAGGAGGCAAAC
ATTTTGTTCTCGAAGGAAGAACACCCAAGTTGTAAACATAATTTATTCCC
GT
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Coding sequence (CDS) from alignment at H-elongata_contig16092:1214..6965-

>mRNA_H-elongata_contig16092.3898.1 ID=mRNA_H-elongata_contig16092.3898.1|Name=mRNA_H-elongata_contig16092.3898.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4740bp|location=Sequence derived from alignment at H-elongata_contig16092:1214..6965- (Himanthalia elongata Himel1 dioecious)
ATGGCCAATTCACCGCCCACAACAGGTTCGAACTCGGACCACCTCACACC
TGCAGCAAGAGTCTCTACCGAGCGCAACATGCCGACTCGTGTCGCGGCTG
AGGGCTCTAGGCGCAATGCCATCGAATATAGGAGCGATTCTCCAACCTCC
CGGCATGACGATGGCCAATTCACCGCCCACAACAGGTTCGAACTCGGACC
ACCTCACACCTGCAGCAAGAGTCTCTACCGAGCGCAACATGCCGACTCGT
GTCGCGGCTGAGGGCTCTAGGCGCAATGCCATCGAATATAGGAGCGATTC
TCCAACCTCCCGGCATGACGGGGCAAGGCCAGGTGACGGTGATGCCACAC
ATGGTAGCGGTGGTCGCAGTAGGGGAGCAAGGAACGATGAGTATGGACGA
GGAGCGCAATCCGATGATGACGGAGACAACGACAATTTGAAGGGTGACCC
CGAAAGCTCGCCTCGAAGGGCACTCTCATCGGGGCAAGGCCAGGTGACGG
TGATGCCACACATGGTAGCGGTGGTCGCAGTAGGGGAGCAAGGAACGATG
AGTATGGACGAGGAGCGCAATCCGATGATGACGGAGACAACGACAATTTG
AAGGGTGACCCCGAAAGCTCGCCTCGAAGGGCACTCTCATCGTCCAGGGG
ACCAACTATCGTGATATCCCTTGGCACCGTGGCATTGTATCGACACACTT
GCACTTTTCTGCCTATCCCACAGGATGAATTCGCGCTCATCTCTGTCCCA
CTCGACACGTGGGTTGGGAGATACGTCCGAATCACTACCCCGAGACACAA
CGGCACGACGGGTCTGGTTCACCGGACAGGTAACGGCTGGGTCAACCTAC
AAACATCTCTGGGAGATGTCGCCAAGCGAGCTTACGATCTCGTCGTCATC
CCGAAGGAGAAGGCCAACATAGGTTCCAACACCTCTTTGGAGAGAGGAGA
GGCCTTGCGCGGGAAGAGATACAATAGGGGCGCGAAAGTCCAGGGGACCA
ACTATCGTGATATCCCTTGGCACCGTGGCATTGTATCGACACACTTGCAC
TTTTCTGCCTATCCCACAGGATGAATTCGCGCTCATCTCTGTCCCACTCG
ACACGTGGGTTGGGAGATACGTCCGAATCACTACCCCGAGACACAACGGC
ACGACGGGTCTGGTTCACCGGACAGGTAACGGCTGGGTCAACCTACAAAC
ATCTCTGGGAGATGTCGCCAAGCGAGCTTACGATCTCGTCGTCATCCCGA
AGGAGAAGGCCAACATAGGTTCCAACACCTCTTTGGAGAGAGGAGAGGCC
TTGCGCGGGAAGAGATACAATAGGGGCGCGAAAGGTGGTCCGGCAAGCAT
GGGTAGTAATTCGGGCTCAGGAGATGAGCGGAAACCAACTTCCAGGAGTC
GTAACTCACGCTCGAATGTGAACACAGGAAACAACTCAAGCTCTGAAGGC
GATGAAGGCGATTCCAGTGGCCAGGTGGTCCGGCAAGCATGGGTAGTAAT
TCGGGCTCAGGAGATGAGCGGAAACCAACTTCCAGGAGTCGTAACTCACG
CTCGAATGTGAACACAGGAAACAACTCAAGCTCTGAAGGCGATGAAGGCG
ATTCCAGTGGCCAGGATGATAACGACGACGGAGACGGAGACGAGCATGAC
AACAGAGGTCGTCCTACTCGCCATAGGAACAGGGCTGCCGCCGCGGACGA
CGGCAGCGACTTCGATGAGGCTGAACACGAAGAACACGATGAAGATGACG
GTGAAAACGATGAGCGCTACAACAGGATACGAAACACCGCTAGGAGTGGC
AGGCCTTTCACTGCCGCTAAGCCTCGCTCAATGAACAGAAGCGGAGGCAG
GGATAGGTACGGAGGCGGCGAACACGTAAAGTCGTCCGGCAGAATGTCGA
TCACGTACACTCGTCGCGAAGGAGGGGGTGGCAAGGGGAGGAGTAGGGCT
AACGAATACGACAAAATAAAAGACCGGGAGCGTGCCAGGGAGAGGGCGGA
CTACCCGTCCAAGGGTGCCATCGGCAAGGATAGAGACGGAATGAAGGGGG
ATGGCTTCACGTCTGCCTCGAGGAACAGGGAGCGAGACTCCGAGGTGGGA
GGATCTCGTTCCAAGCGAAGAGAGGTGGGAAATTATTTCGCCTCGGGTGT
CGACTCCGATGATAGGCTAGCTTCCGGTTCAACTCGAGATCGCGTGGACC
GCTCCAAGGATAAGAATGGCTCCCAAGCTTCGGGCAAGAAGGATGATAAC
GACGACGGAGACGGAGACGAGCATGACAACAGAGGTCGTCCTACTCGCCA
TAGGAACAGGGCTGCCGCCGCGGACGACGGCAGCGACTTCGATGAGGCTG
AACACGAAGAACACGATGAAGATGACGGTGAAAACGATGAGCGCTACAAC
AGGATACGAAACACCGCTAGGAGTGGCAGGCCTTTCACTGCCGCTAAGCC
TCGCTCAATGAACAGAAGCGGAGGCAGGGATAGGTACGGAGGCGGCGAAC
ACGTAAAGTCGTCCGGCAGAATGTCGATCACGTACACTCGTCGCGAAGGA
GGGGGTGGCAAGGGGAGGAGTAGGGCTAACGAATACGACAAAATAAAAGA
CCGGGAGCGTGCCAGGGAGAGGGCGGACTACCCGTCCAAGGGTGCCATCG
GCAAGGATAGAGACGGAATGAAGGGGGATGGCTTCACGTCTGCCTCGAGG
AACAGGGAGCGAGACTCCGAGGTGGGAGGATCTCGTTCCAAGCGAAGAGA
GGTGGGAAATTATTTCGCCTCGGGTGTCGACTCCGATGATAGGCTAGCTT
CCGGTTCAACTCGAGATCGCGTGGACCGCTCCAAGGATAAGAATGGCTCC
CAAGCTTCGGGCAAGAAGGACGAAGCGATGATCAAGTCATCGTGGGCGGC
ACAAATGCTGAAAGCTAAGGATCGCCCGAATCTAGTCCACTGGCGTGACG
AACTAGTAGCGATAACAAAAGACAGCAGCGAAGACTTCGAAGACGCCACC
CTCAGCGTCGAGCTCATGAAAATGCGATGTGATGTATGCTATCATGAGAA
AGCGGACGAAGCGATGATCAAGTCATCGTGGGCGGCACAAATGCTGAAAG
CTAAGGATCGCCCGAATCTAGTCCACTGGCGTGACGAACTAGTAGCGATA
ACAAAAGACAGCAGCGAAGACTTCGAAGACGCCACCCTCAGCGTCGAGCT
CATGAAAATGCGATGTGATGTATGCTATCATGAGAAAGCGGACGGCGACA
AATTCTGCTGGAATGCAGATTGCTGGATGTCACCTGTCTTCAATGGCTAC
TTCAAGGCGGAAAGGGACAACAATAGAAACGGCATGAACAACCCGTCACC
TCACAGGGCGGGATACATCAACACTTTCGGGAGAGAAACGATTATTGATT
CTTCGCTGACCAGCGCTTTGCAGGCGCCTGTATGGGACGGCGACAAATTC
TGCTGGAATGCAGATTGCTGGATGTCACCTGTCTTCAATGGCTACTTCAA
GGCGGAAAGGGACAACAATAGAAACGGCATGAACAACCCGTCACCTCACA
GGGCGGGATACATCAACACTTTCGGGAGAGAAACGATTATTGATTCTTCG
CTGACCAGCGCTTTGCAGGCGCCTGTATGGTGGATTGAAACCAAGAGGAA
GCGCAAGCTTGAGGCGCACGAAGTTTTGTCCGAAGACCCAGCCCTCTACC
GCTGGCAGTGCTGGGCATCGGGCGTACATGACCCCAACTCAAGAGATCCC
ACCTTCATCAACGAAGCGCAGTTTGAGGCTGAAGGCTGCAACGAGTGGAT
TGAAACCAAGAGGAAGCGCAAGCTTGAGGCGCACGAAGTTTTGTCCGAAG
ACCCAGCCCTCTACCGCTGGCAGTGCTGGGCATCGGGCGTACATGACCCC
AACTCAAGAGATCCCACCTTCATCAACGAAGCGCAGTTTGAGGCTGAAGG
CTGCAACGAGAAAGCGACAACTTTGGCTCCAGGTCCCGCTCGCAATACGT
CTGGGACGAGGCTACCGCACGAAGGGAATCGGTTTAGGGGTTACGAGGAC
CTCACCGACTCCGAGCGTGGGACCAAGGAGCGTATCGGCAAGGGTCCCAC
TCTTGAGAGTGGACTGGAAGCGTTGGAAGTCGCCCACTCGCGCTCGGGCC
TAAGAGGCAACGCTTCGGGAATGTTTAGTGGAGCCTCCACGTCGCACAGG
ACCAGTCGGTCTGCTGAAGATGACCTCCGTGGTCACCGATTCGGTCTCAT
TGACAGCCGTCCAATGGACCCGGAAGGAAGTGAGGCGGGTGGGAATCGGC
AGAGTGTATCGCTCAGGCGTGATGTCGGCGGGGGTCGCCCGTGGTCGTGA
AAAGCGACAACTTTGGCTCCAGGTCCCGCTCGCAATACGTCTGGGACGAG
GCTACCGCACGAAGGGAATCGGTTTAGGGGTTACGAGGACCTCACCGACT
CCGAGCGTGGGACCAAGGAGCGTATCGGCAAGGGTCCCACTCTTGAGAGT
GGACTGGAAGCGTTGGAAGTCGCCCACTCGCGCTCGGGCCTAAGAGGCAA
CGCTTCGGGAATGTTTAGTGGAGCCTCCACGTCGCACAGGACCAGTCGGT
CTGCTGAAGATGACCTCCGTGGTCACCGATTCGGTCTCATTGACAGCCGT
CCAATGGACCCGGAAGGAAGTGAGGCGGGTGGGAATCGGCAGAGTGTATC
GCTCAGGCGTGATGTCGGCGGGGGTCGCCCGTGGTCGTGA
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