prot_H-elongata_contig160873.3897.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160873.3897.1
Unique Nameprot_H-elongata_contig160873.3897.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length44
Homology
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BLAST of mRNA_H-elongata_contig160873.3897.1 vs. uniprot
Match: A0A6H5KKD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKD6_9PHAE)

HSP 1 Score: 85.9 bits (211), Expect = 1.870e-18
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 
Query:    1 MRQRWVQVGKTDEEANVPVAPSPVTDAEFDEMVRSCVRNDAMEK 44
            MRQRWVQVGKTD EANVPV PSPVTDA+FDEMVRSCVRNDAMEK
Sbjct:  255 MRQRWVQVGKTDAEANVPVTPSPVTDADFDEMVRSCVRNDAMEK 298
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BLAST of mRNA_H-elongata_contig160873.3897.1 vs. uniprot
Match: D7FTP0_ECTSI (Similar to E1a binding protein P400 (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTP0_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 1.870e-18
Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0 
Query:    1 MRQRWVQVGKTDEEANVPVAPSPVTDAEFDEMVRSCVRNDAMEK 44
            MRQRWVQVGKTD EANVPV PSPVTDA+FDEMVRSCVRNDAMEK
Sbjct:  147 MRQRWVQVGKTDAEANVPVTPSPVTDADFDEMVRSCVRNDAMEK 190
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160873.3897.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKD6_9PHAE1.870e-1893.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTP0_ECTSI1.870e-1893.18Similar to E1a binding protein P400 (Partial) (Fra... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160873contigH-elongata_contig160873:213..344 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160873.3897.1mRNA_H-elongata_contig160873.3897.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160873 213..359 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160873.3897.1 ID=prot_H-elongata_contig160873.3897.1|Name=mRNA_H-elongata_contig160873.3897.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=44bp
MRQRWVQVGKTDEEANVPVAPSPVTDAEFDEMVRSCVRNDAMEK
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