prot_H-elongata_contig16069.3890.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16069.3890.1
Unique Nameprot_H-elongata_contig16069.3890.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length168
Homology
BLAST of mRNA_H-elongata_contig16069.3890.1 vs. uniprot
Match: D8LRL0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRL0_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 6.270e-65
Identity = 101/169 (59.76%), Postives = 132/169 (78.11%), Query Frame = 0
Query:    1 TSEAPSAKGVDVDDISGKRLLLEFSAFGFYNRTCQLELKPNGDCLFSKGMVTREKGAWRVEEEEGKEYLQFSAPLTELYTEIFEVPSSLLFWRVPLSRMGDGTIDMQGGQIISERKTLFGLKTNFIDEGSFKARAFASDEEFPNID-FDIREIDVPVRVRMDVRGGGGG 168
            T+   +++ V+VD+ISG+RL++EF AFG++ RTCQLEL  +GDC+FSKGMV +EKGAWRVEEEEG +YLQFS PLTE+Y  +F+VPS+LLFWRVPL +  DG++ +QGGQIISE+ +LFGLKT FIDEG+FKAR  A+DEEFP  D  D   + +P  +    + G GG
Sbjct:  117 TNNQLTSEAVEVDEISGRRLIVEFKAFGYFKRTCQLELLKSGDCVFSKGMVAKEKGAWRVEEEEGTDYLQFSCPLTEMYGVMFDVPSALLFWRVPLRKGADGSVVLQGGQIISEKNSLFGLKTTFIDEGTFKARVLANDEEFPVPDKIDFSSVPIPAGLAKLKKKGKGG 285          
BLAST of mRNA_H-elongata_contig16069.3890.1 vs. uniprot
Match: A0A7S1TVR3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVR3_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.220e-16
Identity = 39/86 (45.35%), Postives = 53/86 (61.63%), Query Frame = 0
Query:   56 GAWRVEEEEGKEYLQFSAPLTELYTEIFEVPSSLLFWRVPLSRMGDGTIDMQGGQIISERKTLFGLKTNFIDEGSFKARAFASDEE 141
            G WRVE EEG +YLQ   P  E+Y E++ +    LFWR  L +  +G I    G+IISE+K+L GLKT+F+ EG+FK       +E
Sbjct:    5 GPWRVETEEGIDYLQVIMPTKEIYRELYNIKGDDLFWRAELQKDAEGNITGVDGKIISEKKSLLGLKTDFVLEGTFKMTPLTDQKE 90          
BLAST of mRNA_H-elongata_contig16069.3890.1 vs. uniprot
Match: A0A8J2STJ2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STJ2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.410e-16
Identity = 54/141 (38.30%), Postives = 80/141 (56.74%), Query Frame = 0
Query:   15 ISGKRLLLEFSAFGFYNRTCQLELKPNGDCLFSKGMVTREKGAWRV---EEEEGKE----YLQFSAPLTELYTEIFEVPSSLLFWRVPLSRMGDGTIDMQGGQIISE-----RKTLFGLK--TNFIDEGSFKARAFASDEE 141
            ++  +L+L+F+ FGF +R C L L   G   FS GMV+   G WRV   + E+G+     YL+FS P+TE+Y+E++ VPS ++FWR  ++  G G + +  G  ISE     RK +  L     F  EG F ARA A  ++
Sbjct:   45 LADTQLVLKFACFGFKDRDCLLTLGSGGTATFSAGMVSDGPGEWRVVAGDPEDGENPRDAYLEFSQPVTEVYSELYNVPSGVVFWRGRVANEG-GRLAIVDGVAISESSDTSRKLVAKLTGGAGFQKEGDFTARAVAPGDD 184          
BLAST of mRNA_H-elongata_contig16069.3890.1 vs. uniprot
Match: F0YEC8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEC8_AURAN)

HSP 1 Score: 84.0 bits (206), Expect = 2.090e-16
Identity = 54/162 (33.33%), Postives = 77/162 (47.53%), Query Frame = 0
Query:    2 SEAPSAKGVDV----DDISG----KRLLLEFSAFGFYNRTCQLELKPNGDCLFSKGMVTREKGAWRVE-------EEEGKEYLQFSAPLTELYTEIFEVPSSLLFWRVPLSRMGDGTIDMQGGQIISERKTLFGLKTN-------FIDEGSFKARAFASDEE 141
            + AP   GV +     D++     +RL+L F+ FGFY R C LEL  +G C +S GM++   G WRV        E     YL+FS P+TE+Y E++ VPS  +FWR  +   G G   + G  I         L +        F  EG+F  R    D++
Sbjct:   32 ARAPRGAGVSLRASPSDVAAALGDERLVLNFACFGFYERDCLLELDGDGTCEYSAGMISDGPGEWRVVGGDPDGGESPADAYLEFSQPMTEIYRELYNVPSGTVFWRGRVVPSGGGYAVVDGVAISEAESQTSKLLSKVVLRGGGFQKEGTFTGRLVLPDDD 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16069.3890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRL0_ECTSI6.270e-6559.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1TVR3_9STRA1.220e-1645.35Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2STJ2_9STRA1.410e-1638.30Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0YEC8_AURAN2.090e-1633.33Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16069contigH-elongata_contig16069:6432..7666 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16069.3890.1mRNA_H-elongata_contig16069.3890.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16069 6432..7666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16069.3890.1 ID=prot_H-elongata_contig16069.3890.1|Name=mRNA_H-elongata_contig16069.3890.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=168bp
TSEAPSAKGVDVDDISGKRLLLEFSAFGFYNRTCQLELKPNGDCLFSKGM
VTREKGAWRVEEEEGKEYLQFSAPLTELYTEIFEVPSSLLFWRVPLSRMG
DGTIDMQGGQIISERKTLFGLKTNFIDEGSFKARAFASDEEFPNIDFDIR
EIDVPVRVRMDVRGGGGG
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