prot_H-elongata_contig16069.3889.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig16069.3889.1
Unique Nameprot_H-elongata_contig16069.3889.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length213
Homology
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: B7ZGN7_9PHAE (3-isopropylmalate dehydratase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=B7ZGN7_9PHAE)

HSP 1 Score: 350 bits (897), Expect = 3.770e-120
Identity = 175/209 (83.73%), Postives = 191/209 (91.39%), Query Frame = 0
Query:    4 SSVSRQATAVDLSDARVKEMPQNRDRPDKYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIKKQDD 212
            SSV+RQA A D  D R KEMP+ R+RP KY GACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLP VY+ RFV+EG+MKTKYPIMIAG NFGCGSSREHAPIA+GAAG RVVVAESYARIFFRNSIATGELYPYEC+ERLVD+  TGDE++VDLSTDTLTNHA+GKEY L+PLGDA PVINAGGLFP+AIQTGMIKK ++
Sbjct:   41 SSVARQAAASDDMDPREKEMPKFRERPTKYTGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPSVYKTRFVEEGSMKTKYPIMIAGDNFGCGSSREHAPIALGAAGARVVVAESYARIFFRNSIATGELYPYECQERLVDIIKTGDELTVDLSTDTLTNHASGKEYPLTPLGDAAPVINAGGLFPFAIQTGMIKKLEE 249          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A6H5JPR9_9PHAE (Aconitase_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPR9_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 3.760e-117
Identity = 167/204 (81.86%), Postives = 185/204 (90.69%), Query Frame = 0
Query:    9 QATAVDLSDARVKEMPQNRDRPDKYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIKKQDD 212
            +A A  + D RVKEMP+NRDRPDKY G CFVVKDNIDTDQIIPAEYLTLVPS A+EYEKLGSYAMIGLP VY  R+V+EG+M T+YPI+IAG NFGCGSSREHAPIA+GAAG RVVVAESYARIFFRNSIATGELYPYEC+ERLVD F+TGD+V+VDL+TDTL NH TGKEY L+PLGDAGPVINAGGLFPYAI+TGMIKK D+
Sbjct:   53 EADAAAIDDPRVKEMPKNRDRPDKYTGQCFVVKDNIDTDQIIPAEYLTLVPSNANEYEKLGSYAMIGLPDVYTTRYVEEGSMATRYPIIIAGDNFGCGSSREHAPIALGAAGARVVVAESYARIFFRNSIATGELYPYECQERLVDAFTTGDDVTVDLTTDTLINHTTGKEYPLNPLGDAGPVINAGGLFPYAIKTGMIKKMDE 256          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: D8SLS4_SELML (Aconitase_C domain-containing protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8SLS4_SELML)

HSP 1 Score: 258 bits (658), Expect = 1.060e-84
Identity = 125/176 (71.02%), Postives = 149/176 (84.66%), Query Frame = 0
Query:   32 KYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMI 207
            + +G CFVV+DNIDTDQIIPAEYLTLVPSK DEYEKLGSYAM GLP  Y + F++ G  KTKY I+IAG+NFGCGSSREHAP+A+GA+G++VVVAESYARIFFRNS+ATGE+YP EC+ R+ D F  GD+V+VD+  D + NH+TGKEY+L PLGDA PVI AGG+F YA QTGMI
Sbjct:    9 QISGKCFVVRDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYAMAGLPPHYGQ-FMEPGKSKTKYSIIIAGSNFGCGSSREHAPVALGASGIQVVVAESYARIFFRNSVATGEMYPVECEARICDEFHNGDDVTVDMERDVVVNHSTGKEYALKPLGDAAPVIEAGGIFAYARQTGMI 183          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A7N0U1F4_KALFE (Aconitase_C domain-containing protein n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0U1F4_KALFE)

HSP 1 Score: 259 bits (663), Expect = 2.240e-84
Identity = 125/178 (70.22%), Postives = 149/178 (83.71%), Query Frame = 0
Query:   33 YAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIKKQ 210
            + G C+VVKDNIDTDQIIPAEYLTLVPSK DEY+KLGSYAMIGLP  Y  RF++ G  +TKY I+IAG NFGCGSSREHAP+A+GAAGV+ VVAESYARIFFRNS+ATGE+YP EC+ R+ D  STGD V+++L  + L NH+TGKE++L P+GDAGPVI AGG+F YA +TGMI  Q
Sbjct:   82 FHGVCYVVKDNIDTDQIIPAEYLTLVPSKPDEYKKLGSYAMIGLPESYRTRFIEPGESETKYSIVIAGDNFGCGSSREHAPVALGAAGVKAVVAESYARIFFRNSVATGEIYPLECEGRICDECSTGDVVTIELKENKLINHSTGKEFALKPIGDAGPVIEAGGIFAYARKTGMIPAQ 259          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A7J7Q700_9CHLO (Small subunit of isopropylmalate dehydratase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q700_9CHLO)

HSP 1 Score: 256 bits (653), Expect = 1.510e-83
Identity = 133/207 (64.25%), Postives = 160/207 (77.29%), Query Frame = 0
Query:    2 QASSVSRQATAVDLSDARVKEMPQNRDRPDKYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIK 208
            Q +++S ++ AV L +A+  + P   D P    G CFV KDNIDTDQIIPAEYLTLVPSK DEYEKLGSYA+IGLP  Y  +FV+EG MKTKY ++I G NFGCGSSREHAP+A+GAAG +VVVAESYARIFFRN ++TGELYP E   R+ +  +TG++V+VD+  + L NH TGKEY L  LGDAGPVI+AGGLF YA Q GMIK
Sbjct:    9 QRAALSSRSRAV-LVEAKTTKAP---DAPRIVRGTCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPDEYTTKFVEEGEMKTKYKVIIGGQNFGCGSSREHAPVALGAAGSQVVVAESYARIFFRNCMSTGELYPVETDVRVCEELNTGEDVTVDMEANVLINHTTGKEYQLKALGDAGPVIDAGGLFDYARQQGMIK 211          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: UPI002009A417 (3-isopropylmalate dehydratase small subunit 1-like n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009A417)

HSP 1 Score: 254 bits (648), Expect = 3.510e-83
Identity = 124/179 (69.27%), Postives = 143/179 (79.89%), Query Frame = 0
Query:   33 YAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIKKQD 211
            + G C+VV DNIDTDQIIPAEYLTLVPS  DEYEKLGSYA+IGLP  YE RFV+ GA KTKY I+I G NFGCGSSREHAP+A+GAAGV  VVAESYARIFFRNS+ATGE+YP E + RL +  +TGD V+++L    L NH TGKEY L P+GDAGPVI AGG+F YA + GMI  +D
Sbjct:    8 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSTYESRFVEPGATKTKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRNSVATGEIYPLESEGRLCEECTTGDVVTIELGESKLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKAGMIPSRD 186          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A4D9BDJ2_SALSN (3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BDJ2_SALSN)

HSP 1 Score: 255 bits (651), Expect = 1.140e-82
Identity = 125/179 (69.83%), Postives = 143/179 (79.89%), Query Frame = 0
Query:   33 YAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIKKQD 211
            + G C+VV DNIDTDQIIPAEYLTLVPS  DEYEKLGSYA+IGLP  YE RFV+ GA KTKY I+I G NFGCGSSREHAP+A+GAAGV  VVAESYARIFFRNS+ATGE+YP E + RL D  +TGD V+++L    L NH TGKEY L P+GDAGPVI AGG+F YA + GMI  +D
Sbjct:   75 FHGLCYVVGDNIDTDQIIPAEYLTLVPSNPDEYEKLGSYALIGLPSTYEARFVEPGATKTKYSIVIGGDNFGCGSSREHAPVALGAAGVAAVVAESYARIFFRNSVATGEIYPLESEGRLCDECTTGDVVTIELGESKLINHTTGKEYKLKPIGDAGPVIEAGGIFAYARKAGMIPSRD 253          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A1Y1I3V1_KLENI (3-isopropylmalate dehydratase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I3V1_KLENI)

HSP 1 Score: 254 bits (648), Expect = 1.930e-82
Identity = 127/174 (72.99%), Postives = 145/174 (83.33%), Query Frame = 0
Query:   35 GACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIK 208
            G  FVV DNIDTDQIIPAEYLTLVPSK +EYEKLGSYAM GLP  Y   F++EG MKTKYPIMI G N+GCGSSREHAP+A+GAAG++ VVAESYARIFFRNS+ATGELYP E   RL +   TGDEV+VD+  D LT+H TGK+Y+L P+G+AGPVI+AGGLF YA QTGMIK
Sbjct:   63 GPVFVVDDNIDTDQIIPAEYLTLVPSKPEEYEKLGSYAMAGLPKGYGI-FIEEGEMKTKYPIMIGGKNYGCGSSREHAPVALGAAGLKAVVAESYARIFFRNSVATGELYPVEIDTRLCEELKTGDEVTVDMENDVLTHHGTGKQYNLKPIGEAGPVIDAGGLFNYARQTGMIK 235          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A836BR91_9CHLO (Aconitase_C domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BR91_9CHLO)

HSP 1 Score: 252 bits (643), Expect = 4.990e-82
Identity = 130/203 (64.04%), Postives = 155/203 (76.35%), Query Frame = 0
Query:    8 RQATAVDLSDARV-KEMPQNRDRPDKYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGV-YEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMIK 208
            RQA     S  RV  ++ +  + P    G CFV KDNIDTDQIIPAEYLTLVPSK DEYEKLGSYA+IGLP V Y  R+V++G+MKT+YP++I G NFGCGSSREHAP+A+GAAG +V VAESYARIFFRN IATGELYP E   RL D+  TG EV+VD+  + LT+H+TGK Y L  +GDAGPVI+AGG+F +A   GMIK
Sbjct:   10 RQARPARRSTVRVCAKVDKKPNEPRIIRGKCFVTKDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPDVEYPTRYVNDGSMKTEYPVIIGGQNFGCGSSREHAPVALGAAGAKVCVAESYARIFFRNCIATGELYPCETDVRLCDVLKTGSEVTVDMEANVLTDHSTGKTYKLQDIGDAGPVIDAGGIFEFARAAGMIK 212          
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Match: A0A371HP06_MUCPR (3-isopropylmalate dehydratase small subunit 3 (Fragment) n=1 Tax=Mucuna pruriens TaxID=157652 RepID=A0A371HP06_MUCPR)

HSP 1 Score: 253 bits (647), Expect = 8.030e-82
Identity = 124/189 (65.61%), Postives = 146/189 (77.25%), Query Frame = 0
Query:   19 RVKEMPQNRDRPDKYAGACFVVKDNIDTDQIIPAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAGANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKERLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPYAIQTGMI 207
            R+  +  +      + G C+VV DNIDTDQIIPAEYLTLVPSK DEYEKLGSYA+IGLP  Y  RF+D G  KTKYPI+IAGANFGCGSSREHAP+A+GA+G   VVAESYARIFFRNS+ATGE+YP E + RL +   TGD V+++L    L NH +GKEY L P+GDAGPVI AGG+F YA +TGMI
Sbjct:   58 RIPRVQASASSSSSFHGLCYVVGDNIDTDQIIPAEYLTLVPSKPDEYEKLGSYALIGLPASYATRFIDPGETKTKYPIVIAGANFGCGSSREHAPVALGASGAAAVVAESYARIFFRNSVATGEVYPLESESRLCEECRTGDLVTIELGESKLINHTSGKEYRLKPIGDAGPVIEAGGIFAYARKTGMI 246          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig16069.3889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7ZGN7_9PHAE3.770e-12083.733-isopropylmalate dehydratase (Fragment) n=1 Tax=L... [more]
A0A6H5JPR9_9PHAE3.760e-11781.86Aconitase_C domain-containing protein n=2 Tax=Ecto... [more]
D8SLS4_SELML1.060e-8471.02Aconitase_C domain-containing protein n=3 Tax=Sela... [more]
A0A7N0U1F4_KALFE2.240e-8470.22Aconitase_C domain-containing protein n=2 Tax=Kala... [more]
A0A7J7Q700_9CHLO1.510e-8364.25Small subunit of isopropylmalate dehydratase n=1 T... [more]
UPI002009A4173.510e-8369.273-isopropylmalate dehydratase small subunit 1-like... [more]
A0A4D9BDJ2_SALSN1.140e-8269.833-isopropylmalate/(R)-2-methylmalate dehydratase s... [more]
A0A1Y1I3V1_KLENI1.930e-8272.993-isopropylmalate dehydratase n=1 Tax=Klebsormidiu... [more]
A0A836BR91_9CHLO4.990e-8264.04Aconitase_C domain-containing protein n=1 Tax=Edap... [more]
A0A371HP06_MUCPR8.030e-8265.613-isopropylmalate dehydratase small subunit 3 (Fra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011827Hydrolyase LeuD/HacB/DmdBTIGRFAMTIGR02087TIGR02087coord: 37..201
e-value: 4.6E-34
score: 115.4
IPR015928Aconitase/3-isopropylmalate dehydratase, swivelGENE3D3.20.19.10coord: 31..211
e-value: 5.8E-46
score: 158.2
IPR000573Aconitase A/isopropylmalate dehydratase small subunit, swivel domainPFAMPF00694Aconitase_Ccoord: 83..142
e-value: 6.9E-18
score: 65.2
NoneNo IPR availablePANTHERPTHR43345FAMILY NOT NAMEDcoord: 31..209
NoneNo IPR availablePANTHERPTHR43345:SF23-ISOPROPYLMALATE DEHYDRATASE SMALL SUBUNIT 2-RELATEDcoord: 31..209
NoneNo IPR availableSUPERFAMILY52016LeuD/IlvD-likecoord: 30..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig16069contigH-elongata_contig16069:2791..5394 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig16069.3889.1mRNA_H-elongata_contig16069.3889.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig16069 2791..5394 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig16069.3889.1 ID=prot_H-elongata_contig16069.3889.1|Name=mRNA_H-elongata_contig16069.3889.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=213bp
GQASSVSRQATAVDLSDARVKEMPQNRDRPDKYAGACFVVKDNIDTDQII
PAEYLTLVPSKADEYEKLGSYAMIGLPGVYEKRFVDEGAMKTKYPIMIAG
ANFGCGSSREHAPIAMGAAGVRVVVAESYARIFFRNSIATGELYPYECKE
RLVDLFSTGDEVSVDLSTDTLTNHATGKEYSLSPLGDAGPVINAGGLFPY
AIQTGMIKKQDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011827LeuD_type2/HacB/DmdB
IPR015928Aconitase/3IPM_dehydase_swvl
IPR000573AconitaseA/IPMdHydase_ssu_swvl