mRNA_H-elongata_contig160492.3877.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA) HSP 1 Score: 108 bits (269), Expect = 8.390e-26 Identity = 49/72 (68.06%), Postives = 58/72 (80.56%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP +N+ YV+NELSSTVSV+E+N A LE G TLR VQ++STIPSAFPRKLNTCGRIC+DP+GR V
Sbjct: 438 FHPTLNTVYVINELSSTVSVFEFNANIAETLEAGSSKSTLRLVQNISTIPSAFPRKLNTCGRICIDPSGRHV 509
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A835YI21_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI21_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.930e-25 Identity = 48/72 (66.67%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP +N+ YV+NELSSTVSV+E+N A LE G TLR VQS+STIPSAFP LNTCGRIC+DP+GR+V
Sbjct: 237 FHPTLNTVYVINELSSTVSVFEFNATIAETLEAGSSKSTLRLVQSISTIPSAFPGTLNTCGRICIDPSGRYV 308
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A0G4I6E3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I6E3_9ALVE) HSP 1 Score: 99.0 bits (245), Expect = 1.400e-22 Identity = 44/69 (63.77%), Postives = 57/69 (82.61%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTG 207
FHP +N+ YVVNELSSTVSV+E+++ AA L G ++ TLRF+Q++STIP+A+PRK NTCGRI VDP G
Sbjct: 237 FHPTMNTVYVVNELSSTVSVFEFDMAAADSLTEGSNVQTLRFIQNISTIPTAYPRKSNTCGRIAVDPKG 305
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A8J2APN0_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J2APN0_9DINO) HSP 1 Score: 88.6 bits (218), Expect = 6.680e-19 Identity = 43/77 (55.84%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVY---EYNVQAA--RGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP+++ YVVNEL+STV V+ EY VQ A + + + TL +Q +ST+P AFP+ LNTCGRICVDPTGRWV
Sbjct: 338 FHPSLDVCYVVNELASTVQVFRFDEYRVQEALEKSYRKQECPATLERIQEISTLPEAFPKNLNTCGRICVDPTGRWV 414
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A7S3RFJ9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RFJ9_9SPIT) HSP 1 Score: 83.2 bits (204), Expect = 9.310e-19 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP + YVVNELSS VSV+ ++ AA+ + G +PTLR VQ+V T+P A+P +NTCGRICV +GR+V
Sbjct: 26 FHPTLPFCYVVNELSSEVSVFAFSHAAAQDVMAGASLPTLRLVQTVKTVPEAWPGDMNTCGRICVHGSGRFV 97
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A7S3YTS1_9EUKA (Hypothetical protein n=4 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YTS1_9EUKA) HSP 1 Score: 87.8 bits (216), Expect = 1.130e-18 Identity = 37/72 (51.39%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FH +N AY++NE+S TV+V++++ A +E G+ P+L +QS+ST+P FP NTCGRICVDPTGR+V
Sbjct: 297 FHRELNVAYLINEMSCTVAVFKFDPSAIEKIEAGESFPSLTQIQSISTVPEGFPSMYNTCGRICVDPTGRFV 368
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A9VB49_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VB49_MONBE) HSP 1 Score: 87.0 bits (214), Expect = 1.700e-18 Identity = 42/74 (56.76%), Postives = 54/74 (72.97%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDH--MPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP +N YVVNELSSTVSV++Y+ +AA L + L F QS+ T+P AFPR LNTCGRIC+DP+G++V
Sbjct: 242 FHPELNIMYVVNELSSTVSVFDYDREAAAQLAANPSADVTILTFKQSIPTVPEAFPRSLNTCGRICLDPSGQYV 315
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: F2U7G7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7G7_SALR5) HSP 1 Score: 84.3 bits (207), Expect = 1.530e-17 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP + AYVVNELSSTV+V+ +N++ A + PTL +Q++STIPSAFPR LNTCGRI V G +V
Sbjct: 231 FHPKLPVAYVVNELSSTVAVFSFNIEQAARIAEEPEKPTLTLLQTISTIPSAFPRHLNTCGRITVTNAGTFV 302
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A6S8SF55_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8SF55_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.360e-16 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYEYNVQAARG----------LERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP N+ YVVNELSSTV+V+ N R LE+ + TL +QS++TIPSAFP+K+NTCGR+C+ +GR+V
Sbjct: 267 FHPKYNTMYVVNELSSTVAVFSVNKDLIRAINTAATNGESLEKFKGLSTLTLIQSINTIPSAFPKKMNTCGRLCLHKSGRYV 348
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Match: A0A7S1ZIT2_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIT2_TRICV) HSP 1 Score: 82.0 bits (201), Expect = 1.400e-16 Identity = 43/82 (52.44%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 FHPAVNSAYVVNELSSTVSVYE------YNVQAA----RGLERGDHMPTLRFVQSVSTIPSAFPRKLNTCGRICVDPTGRWV 216
FHP+ N AYVVNELSST++V+ Y V A +ER TLR +QS+ TIP+AFP K+NTCGRICV +GR+V
Sbjct: 295 FHPSYNVAYVVNELSSTIAVFSVDRELLYEVDRAAKNNENMERFKGRSTLRLIQSIRTIPTAFPTKMNTCGRICVHKSGRFV 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160492.3877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig160492.3877.1 >prot_H-elongata_contig160492.3877.1 ID=prot_H-elongata_contig160492.3877.1|Name=mRNA_H-elongata_contig160492.3877.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=72bp FHPAVNSAYVVNELSSTVSVYEYNVQAARGLERGDHMPTLRFVQSVSTIPback to top mRNA from alignment at H-elongata_contig160492:105..320- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig160492.3877.1 ID=mRNA_H-elongata_contig160492.3877.1|Name=mRNA_H-elongata_contig160492.3877.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=216bp|location=Sequence derived from alignment at H-elongata_contig160492:105..320- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig160492:105..320- >mRNA_H-elongata_contig160492.3877.1 ID=mRNA_H-elongata_contig160492.3877.1|Name=mRNA_H-elongata_contig160492.3877.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=432bp|location=Sequence derived from alignment at H-elongata_contig160492:105..320- (Himanthalia elongata Himel1 dioecious)back to top |