prot_H-elongata_contig160321.3873.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig160321.3873.1
Unique Nameprot_H-elongata_contig160321.3873.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length156
Homology
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GYH9_9APHY (Uncharacterized protein n=6 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GYH9_9APHY)

HSP 1 Score: 127 bits (320), Expect = 3.350e-31
Identity = 62/155 (40.00%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            + EAQAS EWP+W++A+  E D     G W++ +  K +  +G + VF+RK NK+G++ KYK RLV QG+ Q+ G+ + E+  P     SIR +L +     WE  Q+DV  AYL  D++EEIY+  PE + D   ++  L+K +YGL  +G  W
Sbjct:  910 LAEAQASPEWPEWEKAVKAEYDQLQGMGTWELQDLPKDRNAVGCKWVFQRKTNKEGQVVKYKARLVAQGYSQIPGMDFLETFAPVVRLESIRAILALAVVNNWEIGQMDVKGAYLNGDLQEEIYMRQPEGFDDGSGRICRLRKTLYGLKQSGREW 1064          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 125 bits (315), Expect = 1.580e-30
Identity = 67/154 (43.51%), Postives = 95/154 (61.69%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAG 152
            + EA  S+EWP+WK AI +EM    + G + +VE  K   ++G++ VF+ K N +G+IE YK RLV QGF QV GI + E+  P +  ASIR++L + A   WE  Q+DV  AYL  D+EEEIY+  P    +  K+  V  LK+ +YGL  +G
Sbjct:  925 LNEAMQSTEWPKWKEAIAKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEGEIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKEHLVCRLKRPLYGLKQSG 1078          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GP19_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GP19_9APHY)

HSP 1 Score: 122 bits (305), Expect = 2.630e-29
Identity = 65/154 (42.21%), Postives = 94/154 (61.04%), Query Frame = 0
Query:    1 MGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAG 152
            + EA  S+EWP+WK AI +EM    + G + +VE  K   ++G++ VF+ K N + +IE YK RLV QGF QV GI + E+  P +  ASI ++L + A   WE  Q+DV  AYL  D+EEEIY++ P    +  K+  V  LK+ +YGL  +G
Sbjct:  115 LNEAMQSTEWPKWKEAIVKEMQNLDSHGTYTLVEPPKNTNIVGSKFVFRIKHNAEREIESYKARLVAQGFTQVPGIDFNETFAPVAKLASIHLILALAACYDWELHQMDVKGAYLNGDLEEEIYMQQPPGQAEPGKEHLVCRLKRPLYGLKQSG 268          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A5K1K0E1_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ganoderma boninense TaxID=34458 RepID=A0A5K1K0E1_9APHY)

HSP 1 Score: 122 bits (305), Expect = 3.310e-29
Identity = 65/155 (41.94%), Postives = 97/155 (62.58%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW 155
            EAQAS +WPQW+RAI  EM+   A G + +V +  G  V+G+++VF RK N +G + + K R+V QGF Q+ GI + E+  P +  +S+R+++ + A  GW   QLDV  AYL  D++EEIY+  P     + ++  V  LKK++YGL  AG  W
Sbjct:  327 EAQASPDWPQWERAIEVEMENLRAHGTYDLVVKPPGAHVIGSKLVFHRKRNAEGAVTQCKVRVVAQGFAQIPGIDFNETFAPVAKPSSLRVMIALAARFGWPMIQLDVKSAYLNGDLDEEIYMRQPPGTAAAGEEHLVCRLKKSLYGLKQAGRAW 481          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A177U0B1_9BASI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Tilletia caries TaxID=13290 RepID=A0A177U0B1_9BASI)

HSP 1 Score: 120 bits (302), Expect = 4.730e-29
Identity = 58/149 (38.93%), Postives = 92/149 (61.74%), Query Frame = 0
Query:    7 SSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            S+EW QWK+A+  E+      G W +VE   G  ++G+R V+K K+++DG   +YK RLV QGF Q +GI ++E+  P +   ++R+V+++  ALG     +D+  AYL   + EE+Y++ P  Y D   +V LL++A+YGL  AG  W
Sbjct:   34 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 182          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A5N6P275_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P275_9ASTR)

HSP 1 Score: 119 bits (299), Expect = 8.490e-29
Identity = 68/155 (43.87%), Postives = 94/155 (60.65%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW 155
            +A  SSE PQWK AI  E+D  +    W++V+   G   LG R +FKRK+  DG I+KYK RLV++GFRQ +G+ Y +S  P +   SIR+VL + A    E  Q+DV  A+L  D+EEEIY+E PE +    ++  V  L K++YGL  A   W
Sbjct:  290 DAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDSYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 444          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A177VSQ5_9BASI (Integrase catalytic domain-containing protein n=1 Tax=Tilletia controversa TaxID=13291 RepID=A0A177VSQ5_9BASI)

HSP 1 Score: 120 bits (302), Expect = 8.740e-29
Identity = 58/149 (38.93%), Postives = 92/149 (61.74%), Query Frame = 0
Query:    7 SSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            S+EW QWK+A+  E+      G W +VE   G  ++G+R V+K K+++DG   +YK RLV QGF Q +GI ++E+  P +   ++R+V+++  ALG     +D+  AYL   + EE+Y++ P  Y D   +V LL++A+YGL  AG  W
Sbjct:  703 SAEWAQWKQAMDEEVASLTEMGTWVLVEPRSGHNIVGSRWVYKLKLDRDGNAARYKARLVAQGFTQREGIDFKETFAPVARLVTVRLVISVALALGLHLGSIDIKTAYLNGKLHEEVYMQQPPEYDDGTGRVCLLRRAIYGLKQAGRAW 851          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 120 bits (302), Expect = 8.870e-29
Identity = 66/155 (42.58%), Postives = 96/155 (61.94%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELP--EAYRDSRKQVGLLKKAMYGLVHAGLLW 155
            EA  S +WPQW++AI +EM        + +VE  +   V+G++ VF+ K N +GKIE YK RLV QGF Q+ GI + ++  P +  ASIR++L + A   W+  Q+DV  AYL AD+EEEI+++ P  +A R     V LL+ A+YGL  +G  W
Sbjct:  965 EAMQSPDWPQWQKAIEKEMRNLRDHHTYDLVEPPENTNVVGSKFVFRIKRNANGKIESYKARLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKEHWVCLLRHAIYGLKQSGRQW 1119          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR)

HSP 1 Score: 120 bits (301), Expect = 1.120e-28
Identity = 68/155 (43.87%), Postives = 95/155 (61.29%), Query Frame = 0
Query:    3 EAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQ--VGLLKKAMYGLVHAGLLW 155
            EA  SSE PQWK AI  E+D  +   +W++V+   G   LG R +FKRK+  DG I+KYK RLV++GFRQ +G+ Y ++  P +   SIR+VL + A    E  Q+DV  A+L  D+EEEIY+E PE +    ++  V  L K++YGL  A   W
Sbjct:  297 EAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEGFSAPGQEGKVCKLVKSLYGLKQAPKQW 451          
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Match: A0A151RGT1_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151RGT1_CAJCA)

HSP 1 Score: 115 bits (287), Expect = 1.200e-28
Identity = 56/145 (38.62%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   13 WKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKRKINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAALGWEARQLDVDMAYLEADVEEEIYVELPEAYR--DSRKQVGLLKKAMYGLVHAGLLW 155
            W +A+  EM+       W++V++ + K  +G R +F  K   DG IE+YK RLV +G+ Q  GI Y+E+  P +   ++R+VL + A  GW+  QLDV  A+L  ++EEE+Y+E+P+ ++  + R +V LLKKA+YGL  +   W
Sbjct:    6 WTQAMKEEMNALERNSTWEIVDKPRDKKAIGCRWIFTVKHKADGTIERYKARLVAKGYTQTYGIDYKETFAPVAKMNTVRVVLALTAHFGWDLHQLDVKSAFLHGNLEEEVYMEIPQGFKVQNERNKVCLLKKALYGLTQSLRAW 150          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig160321.3873.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401GYH9_9APHY3.350e-3140.00Uncharacterized protein n=6 Tax=Sparassis crispa T... [more]
A0A401GN13_9APHY1.580e-3043.51Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A401GP19_9APHY2.630e-2942.21Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5K1K0E1_9APHY3.310e-2941.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A177U0B1_9BASI4.730e-2938.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6P275_9ASTR8.490e-2943.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A177VSQ5_9BASI8.740e-2938.93Integrase catalytic domain-containing protein n=1 ... [more]
A0A401GQU1_9APHY8.870e-2942.58Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A5N6PKD3_9ASTR1.120e-2843.87Integrase catalytic domain-containing protein n=1 ... [more]
A0A151RGT1_CAJCA1.200e-2838.62Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 29..155
e-value: 1.5E-30
score: 106.6
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 11..148
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 11..148

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig160321contigH-elongata_contig160321:505..972 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig160321.3873.1mRNA_H-elongata_contig160321.3873.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig160321 415..1469 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig160321.3873.1 ID=prot_H-elongata_contig160321.3873.1|Name=mRNA_H-elongata_contig160321.3873.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=156bp
MGEAQASSEWPQWKRAITREMDGQVARGVWQVVERLKGKTVLGTRVVFKR
KINKDGKIEKYKCRLVVQGFRQVKGIHYEESSFPTSAQASIRMVLNMIAA
LGWEARQLDVDMAYLEADVEEEIYVELPEAYRDSRKQVGLLKKAMYGLVH
AGLLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like