mRNA_H-elongata_contig15996.3856.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15996.3856.1
Unique NamemRNA_H-elongata_contig15996.3856.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Match: A0A6H5K4C0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K4C0_9PHAE)

HSP 1 Score: 379 bits (974), Expect = 6.750e-126
Identity = 209/340 (61.47%), Postives = 254/340 (74.71%), Query Frame = 3 
Query:   21 MGVRRNVAGGLVALACGQSVEAFAIGGAFRSTV-RNAGFSGPPMA--YGAGRRPAGEANVLSDSRSGARYSTTVRMLAGTDFATCSDEDFRNYILGWTFVWSGIIPYTFIAAK---NVLGEVVTAKALPAVSKGEDSTISNQSLLLYKDPIKLIDVVNIVGRFQTYEEVQTEKTKKGLTSEYLFRDTFKASSPSLKHESLRKRKFKGWPKGPDGQPALQDAFGGDVNAMTRIIAKRPLSESAMDAVFDTFAGSPLSIVADRQETASRFFARVFKVENQLEKWRKDSTFDVRGFEQGLLVGRLLFLFTIVTVIALELAGYGVFFIEPIITRYGNPLSFLGF 1022
            M + R++ G L+ALA  +S +AFA GGA R  + R +  SG P+A      R         S SR  AR      MLAG DFATCS+ DFR YI+GWTFVWSGIIPYTFIA+K   NVLGEV+  KA   V +GED+TISNQSLLLYKDPIKL+D+VNIVGRFQT+++VQ +K   G+ S+YLFR+TFK        E+LR+ KFKGWP GPDGQPAL+DAFGGDV A++R +AKR LS++AMDAVFD+F GSPLS+VADR           FKV+NQL+ WRKD+TFD++GFEQGLLVGRLLFLFTIV+++ L LAGYGVFF++PII RYGNPL+FLGF
Sbjct:    1 MILARSLVGVLLALAGRRSADAFASGGASRHAIGRRSALSGAPVASIVSTTRSEMNRVRAASPSRGSAR------MLAGQDFATCSEADFRAYIIGWTFVWSGIIPYTFIASKAIQNVLGEVIGFKARSTVKEGEDATISNQSLLLYKDPIKLLDIVNIVGRFQTFDDVQDKKG--GVMSDYLFRNTFK--------ENLRRSKFKGWPAGPDGQPALKDAFGGDVKAVSRTMAKRELSDTAMDAVFDSFVGSPLSLVADR-----------FKVDNQLDNWRKDNTFDIKGFEQGLLVGRLLFLFTIVSLVGLLLAGYGVFFVQPIIIRYGNPLAFLGF 313
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BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Match: A0A835YTS8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS8_9STRA)

HSP 1 Score: 156 bits (395), Expect = 9.260e-41
Identity = 94/239 (39.33%), Postives = 137/239 (57.32%), Query Frame = 3 
Query:  285 NYILGW-TFVWSGIIPYTFIAAKNVLGEVVTAKALPAVSKGEDSTISNQSLLLYKDPIKLIDVVNIVGRFQTYEEVQTEKTKKGLTSEYLFRDTFKASSPSLKHESLRKRKFKGWPKGPDGQPALQDAFGGDVNAMTRIIAKRPLSESAMDAVFDTFAGSPLSIVADRQETASRFFARVFKVENQLEKWRKDS-TFDVRGFEQGLLVGRLLFLFTIVTVIALELAGYGVFFIEPIITRY 995
            N ++G+    + GI+PYT +A K++  +V   +ALPAV  GE+ T+SNQ LLLY +PI+LIDV+NIV RF++++E+Q E    G  S YL R+ FK    +L          K WP   +G P  QD F    +     +  + + +SA+D VFD F+GS  + +ADR           FKVE  L+ WR D+ +F+V  FE+ LLV R   LF    ++ L+LA + VFFI P+  R+
Sbjct:   15 NTVVGFMALAFQGILPYTIMANKSIFSDVGGFRALPAVKTGEEVTVSNQPLLLYGEPIRLIDVINIVSRFESFDELQDELRDDGNRSNYLRREYFKQKVLTLAP--------KAWPADENGVPVGQDMFA---STSVATLKNKEIRDSALDVVFDVFSGSSRAYIADR-----------FKVEYNLDSWRPDARSFNVAAFEKDLLVTRYSILFIYAVLLLLQLACWSVFFINPLALRF 231
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BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Match: A0A7S2USE2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USE2_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.130e-16
Identity = 64/181 (35.36%), Postives = 86/181 (47.51%), Query Frame = 3 
Query:  372 TAKALPAVSKGEDSTISNQSLLLYKDPIKLIDVVNIVGRFQTYEEVQTEKTKKGLTSEYLFRDTFKASSPSLKHESLRKRKFKGWPKGPDGQPALQDAFGG-DVNAMTRIIAKRPLSESAMDAVFDTFAGSPLSIVADRQETASRFFARVFKVENQLEKWRKDSTFDVRGFEQGLLVGRLL 911
            ++ AL  +S  E  T+ N  LL Y + +KL+DVVN+VGRFQ ++ V  +       +  L R+ FK        + +RK KFK WPK   GQ      F   D     + +    LSE A+DAVFDTF             +AS    R  K E Q  +WR+   FDV  FE  LL   L+
Sbjct:   64 SSHALMFMSDAESLTVKNNGLLKYGEDVKLLDVVNVVGRFQGWDGVWEQPPPGTFFASGLSRERFK--------DKVRKEKFKSWPKDSSGQSVAAKLFPELDGPKGVKQVDSMELSEVALDAVFDTF------------NSASSHTERR-KAEEQFAQWRQGDVFDVEAFESNLLKANLI 223
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BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Match: A0A7S0KA49_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0KA49_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 5.790e-12
Identity = 71/250 (28.40%), Postives = 110/250 (44.00%), Query Frame = 3 
Query:  306 FVWSGIIPYTFIAAKNVLGEVVTAKA------LPAVSKGEDST---ISNQSLLLYKDPIKLIDVVNIVGRFQTYEEVQTEKTKKGLTSEYLF----------RDTFKASSPSLKHESLRKRKFKGWPKGPDGQPALQDAFGGDV--NAMTRIIAKR--PLSESAMDAVFDTFAGSPLSIVADRQETASRFFARVFKVENQLEKWRKDSTFDVRGFEQGLLVGRLLFLFTIVTVIALELAGYGVFFIEPII 986
            F+  G+IP    A K +LG ++  +A      +  VS    S    I N  LL  ++P+KL DVV IVGR +  + V   K       + L           R  FK        +++R  KF GWP      P+  +  GG    +   R ++K+  P+ + A+DAVFDT+A        D             KV+ QL+ WR ++ FD+  F    + GR +    I+T I +++  YG  F+ P +
Sbjct:   82 FLGGGLIPPAIAANKLMLGTILGQRAGGDDDSVAKVSTSASSVSPDIPNSKLLFAREPVKLADVVAIVGRIRDVQSVADWKNLPSAKRDNLIDPENPPMWLPRGMFK--------DNIRNAKFVGWPV----DPSTGEVVGGIELKSEFEREVSKKSYPIPDVALDAVFDTWAWGSGIATPD-------------KVDVQLQAWRSNNGFDLNKFASAAVAGRSVTGAAILTFITIQVMVYGCLFVAPFL 306
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BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Match: A0A7S1BLB2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BLB2_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 5.960e-6
Identity = 59/258 (22.87%), Postives = 108/258 (41.86%), Query Frame = 3 
Query:  318 GIIPYTFIAAKNVLGEVVTAKALPAVSKGEDS----------------------TISNQSLLLYKDPIKLIDVVNIVGRFQTYEEV----QTEKTKKGLTS-----EYLFRDTFKASSPSLKHESLRKRKFKGWPKGPDGQPALQDAFGGDVNAMTRIIAKRP---LSESAMDAVFDTFA-GSPLSIVADRQETASRFFARVFKVENQLEKWRKDSTFDVRGFEQGLLVGRLLFLFTIVTVIALELAGYGVFFIEPII 986
            G+IP    A   ++  +    A P   +G+ S                      T+S   LL   +P+KL+DV+ ++GR     +V        TK    S     ++L R+T+K +        +R  K++GWP   DG P      GG++        ++    +S++A+D VFDT+A G+ ++      E  S +              + + TFD+  F+   ++GR +    I+  + +++  +G  FI P +
Sbjct:  103 GLIPALISANTRIIESLTRKGAAPPKEEGDPSKSLDPYAALPISYVSDSGASGPTLSCSPLLFSGEPVKLVDVLAVIGRISDVNDVARWSDLPSTKLPNVSSNNPPQWLPRNTYKVN--------IRAAKWRGWPVNADGSPI----GGGELQRSEEKRLRQKGAEISDAALDVVFDTWALGAGVATPDKVSEALSSYL-------------KSNGTFDLGKFQSAAVLGRAVTAAAILFFLVIQVIAFGTLFIAPFL 335
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15996.3856.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4C0_9PHAE6.750e-12661.47Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YTS8_9STRA9.260e-4139.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2USE2_9STRA1.130e-1635.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S0KA49_9STRA5.790e-1228.40Hypothetical protein n=1 Tax=Leptocylindrus aporus... [more]
A0A7S1BLB2_9STRA5.960e-622.87Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15996contigH-elongata_contig15996:283..6547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-20_002020.1
Exons9
Model size1590
Cds size1020
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929939.7417324-UTR-H-elongata_contig15996:282..8381622929939.7417324-UTR-H-elongata_contig15996:282..838Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15996 283..838 -
1691679215.9587471-UTR-H-elongata_contig15996:282..8381691679215.9587471-UTR-H-elongata_contig15996:282..838Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15996 283..838 -
1622929939.8843064-UTR-H-elongata_contig15996:6533..65471622929939.8843064-UTR-H-elongata_contig15996:6533..6547Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15996 6534..6547 -
1691679216.0333583-UTR-H-elongata_contig15996:6533..65471691679216.0333583-UTR-H-elongata_contig15996:6533..6547Himanthalia elongata Himel1 dioeciousUTRH-elongata_contig15996 6534..6547 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929939.7608943-CDS-H-elongata_contig15996:838..8811622929939.7608943-CDS-H-elongata_contig15996:838..881Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 839..881 -
1691679215.9660773-CDS-H-elongata_contig15996:838..8811691679215.9660773-CDS-H-elongata_contig15996:838..881Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 839..881 -
1622929939.7723186-CDS-H-elongata_contig15996:1355..14361622929939.7723186-CDS-H-elongata_contig15996:1355..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 1356..1436 -
1691679215.9735265-CDS-H-elongata_contig15996:1355..14361691679215.9735265-CDS-H-elongata_contig15996:1355..1436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 1356..1436 -
1622929939.7826228-CDS-H-elongata_contig15996:1900..19931622929939.7826228-CDS-H-elongata_contig15996:1900..1993Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 1901..1993 -
1691679215.9808948-CDS-H-elongata_contig15996:1900..19931691679215.9808948-CDS-H-elongata_contig15996:1900..1993Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 1901..1993 -
1622929939.7938318-CDS-H-elongata_contig15996:2243..24671622929939.7938318-CDS-H-elongata_contig15996:2243..2467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 2244..2467 -
1691679215.9885864-CDS-H-elongata_contig15996:2243..24671691679215.9885864-CDS-H-elongata_contig15996:2243..2467Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 2244..2467 -
1622929939.81289-CDS-H-elongata_contig15996:3331..34281622929939.81289-CDS-H-elongata_contig15996:3331..3428Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 3332..3428 -
1691679215.9962552-CDS-H-elongata_contig15996:3331..34281691679215.9962552-CDS-H-elongata_contig15996:3331..3428Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 3332..3428 -
1622929939.8279157-CDS-H-elongata_contig15996:3687..38331622929939.8279157-CDS-H-elongata_contig15996:3687..3833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 3688..3833 -
1691679216.0036108-CDS-H-elongata_contig15996:3687..38331691679216.0036108-CDS-H-elongata_contig15996:3687..3833Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 3688..3833 -
1622929939.8408558-CDS-H-elongata_contig15996:4235..44361622929939.8408558-CDS-H-elongata_contig15996:4235..4436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 4236..4436 -
1691679216.01107-CDS-H-elongata_contig15996:4235..44361691679216.01107-CDS-H-elongata_contig15996:4235..4436Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 4236..4436 -
1622929939.8551238-CDS-H-elongata_contig15996:4778..48961622929939.8551238-CDS-H-elongata_contig15996:4778..4896Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 4779..4896 -
1691679216.0183642-CDS-H-elongata_contig15996:4778..48961691679216.0183642-CDS-H-elongata_contig15996:4778..4896Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 4779..4896 -
1622929939.868714-CDS-H-elongata_contig15996:6516..65331622929939.868714-CDS-H-elongata_contig15996:6516..6533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 6517..6533 -
1691679216.0260167-CDS-H-elongata_contig15996:6516..65331691679216.0260167-CDS-H-elongata_contig15996:6516..6533Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15996 6517..6533 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15996.3856.1prot_H-elongata_contig15996.3856.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15996 839..6533 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15996.3856.1

>prot_H-elongata_contig15996.3856.1 ID=prot_H-elongata_contig15996.3856.1|Name=mRNA_H-elongata_contig15996.3856.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=340bp
MTMGVRRNVAGGLVALACGQSVEAFAIGGAFRSTVRNAGFSGPPMAYGAG
RRPAGEANVLSDSRSGARYSTTVRMLAGTDFATCSDEDFRNYILGWTFVW
SGIIPYTFIAAKNVLGEVVTAKALPAVSKGEDSTISNQSLLLYKDPIKLI
DVVNIVGRFQTYEEVQTEKTKKGLTSEYLFRDTFKASSPSLKHESLRKRK
FKGWPKGPDGQPALQDAFGGDVNAMTRIIAKRPLSESAMDAVFDTFAGSP
LSIVADRQETASRFFARVFKVENQLEKWRKDSTFDVRGFEQGLLVGRLLF
LFTIVTVIALELAGYGVFFIEPIITRYGNPLSFLGFLSP*
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mRNA from alignment at H-elongata_contig15996:283..6547-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15996.3856.1 ID=mRNA_H-elongata_contig15996.3856.1|Name=mRNA_H-elongata_contig15996.3856.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=6265bp|location=Sequence derived from alignment at H-elongata_contig15996:283..6547- (Himanthalia elongata Himel1 dioecious)
GTCTGAAGTTCAACATGACTATGGGGGTGAGGTAAGCGCACACAAGCAAA
ACTTACAATATATATTGGAGGCTGACAGCACAAATCCTTTATCGTATATG
ACGGCATTAACCGGTTCAAACTGTACAAGGAATACAGAATACTAGAACTT
GATCTGATGCCTGATGACAGTCCCGGATTAGTACCTGACGTACTTCATCT
TGTATTTTGAAACTACGCTCACGCTCAGCGAGGAGCGTTTCACTCCACGG
TCAATATTTGCACTCATTACGATCTAGGACATCCACGCATAGTTATTCGT
AGAGTAAACGGAGTGATACGATGGAGAGCGCGCCCGTTTTTGTTTCATGT
TCATGTGACTTTCGATTTCATGTACCAACAATATCTATACACGGAGACAC
ACAAACATATCGCCTACAATACTTACGAAAAGAGGTTGTACGTAGTTCTA
CTCGAGCTGGTAGTTCATACTCGTAACATGCCCTGGTACGAGTGGAACTT
ATCGCCTTCTACCGGAACTGCTCAGCTTTCTTTTCGATAAACCCCGTTCC
CACGGCGAGTGACGAATGGGCGGGTGGGGGTGAAACTAAAGGAGTGCTAG
AGAGTGGCCGACTATTAATATTATAGTATAACTTATTAATATTTAATATA
ACTTATTAATAATATACCTGGTAGTAGCTTTCGTTAACACCCCAAGAGTG
GATGCTTCGCTTTTTGGGACCAACTGCTCGCACCCGCTAGGCCCATCACC
ACGTTGGGTGGGGAGCCGAAAACAATTATTGTACAAATATCCTAGCGATC
CCATAATTGACGCGCTCTTATACATGTGGACCAATATCGCTTCATAAATA
TAGTATATATTAGAACGGTTTTAGGGACAAAAGCGTTACACTGAGGTGTA
CGGGTTTTCACAATGTATCCTTGGTTCAATGCTGTACCGGGTAGCATCGT
CTACGGCGAAACACCCTCCGTAGTGTTATACAATTTGAAATGTAACTGTC
GAAGACCTTCATGGGCAAAATTTTTATACAAGCATAATGTTTCGTTCGCT
GATAGGACATTTCAACACTATGGAGGAGAGGAAAATCTTCGCCGCCTCCT
GCCTTTGCAAGGAATGTGTTAAAATTTAAACCTATTATTGGCTTGCGCTA
CGAACACGAAAACCTTAGGGACTACTCGTGTTAGATGACAAGAGGTAGAG
AAGAGAGATAGTGCACCTGCGTCAGGAAAAGAGCACCCTAAATAGTTGTC
CTGGCCTCTTCAAATGCTGGCCAGAGTGATCGAGGAAAGTGGAAGATAAA
TAATATCACAATTAATTGCGATAACTCTGCCAAAACATGGCAAACAAGCA
AAAGGAGAGAGCTGGTGTTGGCTTGTGCTTCCATGGTTTACAACAGTTTT
GAAATAAGCTTAATTTTTTGCTACGCAGTTTATGAGAAATGGCACCCCCT
ATTTAAAAACCCCGTTGTCCCCTGTACACTTCTAAAACAGCGGAAGTATA
GACATAGCAGGTCACCGTTTTGGAAAGACCTCGACGAGGTGTTTGTAACA
TCGCGTTGTTTCATGTCACTTAGTCAGTCACCTACGGACGTTAACGAGTG
AATGGATGTACTGAGCATCACTGCTGTCATGACGTGCCTCTCCATGTCAA
GGAGGAACGTTGCTGGTGGCCTGGTCGCTCTGGCCTGCGGTCAATCTGTG
GAGGCCTTCGCTATCGGGGGGGCTTTTCGCTCGACCGTGCGGAATGCTGG
ATTTTCCGGCCCACCAATGGTAAATGGTGCGCCTTCCCGGTCACTACTGT
AGCATTTTTTTTGTTTTGTTTCTTACCTTTTTGCTTTCTGAGAAATGAGC
GTTTCTCGGCGGTTCAATGTGGTACATGCCAACGAGGAAGCATTATATTA
TACTATTAGATATGGTGCCGGAGCGCGCCGCGGTTGCTTCAACTCCTGGT
CATCGTGTTCGGGATCACGCGTGCATACGGATACGAGTGCTGGGGTGACG
CAGGACTTATTTTCTCACTCTAACACGATACCGTCCTGTTACTAGATCCT
TGACCGATGTGAGTAGATTCACGAACGCCGCCAACACTTTGCGGGGGGTA
ACATGACTCAGGCCTATGGCGCTGGTAGAAGACCTGCCGGGGAGGCTAAC
GTTTTATCTGACTCTCGGAGTGGGGCACGTTATTCCACCACAGTGCGCAT
GCTGGCTGGTACAGATTTCGCCACCTGCTCCGACGAAGATTTCCGCAACT
ACATCCTCGGCTGGACGTTCGTGTGGAGCGGCATCATTCCCTATACATTC
ATCGCGGCAAAGGTTGGGTGACTTGGTCTTGTAGTTGTAGGGTACCCGTT
CGTTGGATCGCCCGTAGAGAAGGGCAGAGTGCGGCAAGTAGTACATACAA
TGTTGTTCAGGTGTACATTATGAGCTCCTCACGCTAATTTTATGTTCATC
TACGGCGGGGCTGTGGTTGACAAGGTGTAGCAAACGGTAGGCGGCATTCT
TCGTGTTCGATCCATTAACATTTTAATGGGGCTGGCTTGCTGTATTTCAA
AGTCATTGCGACGGGAGAAATTCATGTGCAGCCATGTGAGCGGTCCACAT
GGCCACCCCAGGAGACGCAAATATTTCCCGATTTGTTTTTTTTACTCTAA
AAACCTTTTTGGCGAGTATCATCGCAGGTAGTGATTATGAACCTACCCGT
GCTTACATCCACAGAACGTCTTAGGTGAGGTCGTCACAGCGAAAGCTCTG
CCTGCGGTCTCCAAGGGCGAAGACTCCACCATTTCCAACCAATCGCTGCT
GCTGTATAAGGACCCCATCAAGCTCATAGATGTCGTCAATATCGTTGGGC
GTTTCCAAACGTGAGCATTGTTGGGGGGATATATTCTGCTCGTGCGCATT
ATCTTAACAGTGAACAAGCATAGCGTCCGTCGTATGTTTCGTGGTGTCCT
AATGCGTGCTCATGGATTCACCAGTGGGATTCAGTTGAAGCCACGGGCTT
ACTTGAAAGTGGGATTCAGAATCAGAGGGCTCGCTGCCTGTAACGGTTAT
TCAGACGGTGGACTTGGCTTTCGATTGCTCGTGCTCTGTGTGCCGAGGTT
ATGATCCCCGCTCGTGCAGATACGAGGAGGTACAGACAGAGAAGACGAAG
AAGGGACTGACGAGCGAATACTTATTCCGGGACACATTCAAGGCAAGCTC
TCCTTCCCTTAAGCACGTCTTGGATGTTGACGCCTTCGCCGGTGGACGAT
AAGATGTTTCATGATGCGCGGTAACGCCAACTTCGGGCTGGAGGTTCTGC
TCGTGCACGCACTCTTGCAGAGTCACCCTAACCTTTTCAGCCATGCTCTT
GCAGAGTCACCTCTAGCGTGCCCGCTTGGCGCCACCGGTGAACGTTTTCT
ATGTACCGAAAGACGTATTCCAAATCTGAGGGCTCATGTACAGTTTGTTG
TTGCCCTCTAACTGCGCATCTACTGGTTTCGCCCGGCAAAGACGCCGCGC
TTTTCCCGGTTTCGAACGTTTTCATTTATCTAAGTTCGCTGCTTATAGTA
CACGACCTTCGAATAACCGAGCGTTCGAATCATGTCGGGATGTCCTTTCG
ATTCTATAAAATCGTCTCCAATACGGTCTGTGACTGTATCGTACATGTCC
ACTCTACAAAAAATCGGTGTGGGAAAAGGGAGGCGCAAAATAATTGGTCC
ATGGGGTTACCTGAGTAGGCTACACCCGTTACTCAAGCTATCTTGAGGAC
TGCTGGCTCAGTGCCGGCGGACTCTCGGTGGTAACCGCCATCGATACGGA
ATTGCGTGACCTGATGAAATCGGGATTGGACTGATGGCGGTTGACGGTAG
AGATGGATGCCATGTGAAAAACGAGAGGATCCTGGGAGTACGCACAAGAT
TCAGCCTGGTTTGAGAGAATGAGCAGGCTGACGCGGGACGGGATGGACGA
ACCTGTCTCGCAAGACCAAATCATCAGACGCGAACGGGGACAGGGAAATC
AATTTTCCTTATTTAGCTAACCACAAGCAGGAGATAGCCATCATGTTGTT
CTTACTTTGCTATATGTGATGAACACCCAGGAGAGCCTCCGGAAACGGAA
GTTCAAGGGGTGGCCAAAGGGACCCGATGGTCAACCGGCACTTCAGGATG
CATTTGGGGGCGACGTCAATGCGATGACCAGGATTATCGCTAAGCGACCT
CTCTCGGAGAGCGCGATGGACGCGGTTTTCGATACCTTCGCAGGCAGTCC
GTTGTCGATTGTCGCAGACAGGCAAGAAACGGCCAGCAGATTCTTCGCGC
GCGTGTGCTGTCTCATATCTGCAGTTTCAGGCGGCGGATTAGTGATAGAT
AAAAATGTGCCACGGCTATATTGTCCTCGATTCCCGCTCGTCGAGTCATC
CAGATTTTAAATTGGTGCATCCGTACCTACCAGCCCTTGCTGTGGCTCTT
TTTACCCGCAGTGCTCGTGCCAGCGTGAAATAAACAGCGTCCGACACGGG
ACGCAGCGCTCACCTCCTTCGCCATGGCAACCCCTTCATGCCTACACATC
GCAGGTTTAAGGTGGAAAATCAGTTAGAAAAGTGGCGCAAGGACAGTACG
TTCGACGTCAGGGGATTTGAACAGGGCCTCCTTGTGGGACGCTTGCTGTG
AGTTGCCAAGGCGAAGCCGAACGATTTTCCTTCTCTCGATATCGCTGCGT
AGATTATTCCGTAAGGATCTGGACACTCAAGCGAAACATATAAAGAAAGC
GGACGCTATTTGTGAACAAAGTTTCGGCCATCCTCTCGAACTGTCCGCTG
TACTATTTTTTTTTTAAAATCTAGAGGGCGTGAAAGAGGCGTATTAGTAG
TATTCCCCACGGGAGTGTAATATTTTCCACGGATTGAACTACGCTTGAAA
GCTCCCAACTTTCAGCACAGAGGGATACCGTAAAAGGCAAGACGTTATGG
GCATGGCGCGAAGATCTCGTTAGCGGAACCTAAAGGGTTCGAGGAGAAGG
AAATTGACTTAAGCAAAACGTAAAGAGATATACCGGTACGGCGCTCGATA
CTTTTTTATTATTATTTTTTCTCTTGCGATTAAATTGCGTCGTGTTTATT
CCCCACGGAAGGTTTCTTTTCACGATTGTGACTGTGATCGCCTTGGAGCT
TGCTGGATACGGCGTGTTCTTCATCGAGCCGATCATCACCCGGTGAGCTT
CTCTGTAGCCCTACCGCTTTTCCTTCCGGGACATACGCTGCCCTACCGCT
TGACGCGTGAAGGTCTGTTGTTTCTGTATTAAAAAACCTGGTCGCTGTCA
ATAGCAAGAAGCTGTCACTTCCAATCGATCGATTCACCGGGCTTTAGGGC
GGATATTAACGGGATTACAAACATTTTAATTTCCAGCCGATTTAAATTTA
AATCGGGCTCTGATTGGCCGAAAGCTAGATAACGCTTAGCCTTCGTTCAA
TCAGAGCTCGATTTAAATTTAAATCGGCTGGAATTATTTTTTTGTAACCC
CGTTAATACCCGCCCTTTTACCCTAGACGAACGAACTTTGGTAGAAAATT
CTTATTCCTAATCAGTTCACGGGAAGTTGCGCAAATCCCCTCAAATATCA
TGTCGATGCTTTTCTTCTGACTATGACTATCTTTTACACCCTCCTACCCT
CGTAAAATCCCTATAGGTACGGAAACCCCTTGTCGTTCTTGGGTTTCTTA
TCTCCTTGATGGTGGAAGCTTGGTGCTTGTCGACGTCTTTCATCTGGATG
CAAGATGCTCAGAAGGATGTCAAAGATGAACATGCCTAGTTAGTTAAATG
TTTCACCCTTCGTGATCATCAGACGCCCTATATTTGCTCTGTTGATACGG
CAACTGCCCATGGCCCATGCTTTAAGCCGTCCTTAGTAATGTTGGCATGG
GTTTTTTGTTTAACATGGGCGAATGGCGAGTGACATAAAGCGCTTTCTTT
GGGATTGAAACGCTCCGTCGGACATGACTTCAAGAATATTTTGTGTAGTG
TTTCGGATTTACAGAAAAGTCATGGATGTAGCAGTGTTGTTTACCGAAGG
TCTCACATCAAGACGTCGAGACTAAGGAGTCAATTGAGGCTTACCACAAC
CAATAAAAATAACAGCGGAATGGCCCACGACGCAACCGGGCATTTGGGAG
GGTGTCATGAGCTGTGGAATCTAGGGTTTGATCCTCTCCTTCCGACATGG
CGTACGCGTGAAATAAATTGGTTTGTGATTCTAACCTCACCCTGCGAGAT
CTAGTGAGTTAAGCC
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Coding sequence (CDS) from alignment at H-elongata_contig15996:283..6547-

>mRNA_H-elongata_contig15996.3856.1 ID=mRNA_H-elongata_contig15996.3856.1|Name=mRNA_H-elongata_contig15996.3856.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=2040bp|location=Sequence derived from alignment at H-elongata_contig15996:283..6547- (Himanthalia elongata Himel1 dioecious)
ATGACTATGGGGGTGAGATGACTATGGGGGTGAGGAGGAACGTTGCTGGT
GGCCTGGTCGCTCTGGCCTGCGGTCAATCTGTGGAGGCCTTCGCTATCGG
GGGGGCTTTTCGCTCGACCGTGCGGAATGCTGGATTTTCCGGCCCACCAA
TGGAGGAACGTTGCTGGTGGCCTGGTCGCTCTGGCCTGCGGTCAATCTGT
GGAGGCCTTCGCTATCGGGGGGGCTTTTCGCTCGACCGTGCGGAATGCTG
GATTTTCCGGCCCACCAATGGCCTATGGCGCTGGTAGAAGACCTGCCGGG
GAGGCTAACGTTTTATCTGACTCTCGGAGTGGGGCACGTTATTCCACCAC
AGTGCGCATGCTGGCTGGTACAGATTTCGCCACCTGCTCCGACGAAGATT
TCCGCAACTACATCCTCGGCTGGACGTTCGTGTGGAGCGGCATCATTCCC
TATACATTCATCGCGGCAAAGGCCTATGGCGCTGGTAGAAGACCTGCCGG
GGAGGCTAACGTTTTATCTGACTCTCGGAGTGGGGCACGTTATTCCACCA
CAGTGCGCATGCTGGCTGGTACAGATTTCGCCACCTGCTCCGACGAAGAT
TTCCGCAACTACATCCTCGGCTGGACGTTCGTGTGGAGCGGCATCATTCC
CTATACATTCATCGCGGCAAAGAACGTCTTAGGTGAGGTCGTCACAGCGA
AAGCTCTGCCTGCGGTCTCCAAGGGCGAAGACTCCACCATTTCCAACCAA
TCGCTGCTGCTGTATAAGGACCCCATCAAGCTCATAGATGTCGTCAATAT
CGTTGGGCGTTTCCAAACAACGTCTTAGGTGAGGTCGTCACAGCGAAAGC
TCTGCCTGCGGTCTCCAAGGGCGAAGACTCCACCATTTCCAACCAATCGC
TGCTGCTGTATAAGGACCCCATCAAGCTCATAGATGTCGTCAATATCGTT
GGGCGTTTCCAAACATACGAGGAGGTACAGACAGAGAAGACGAAGAAGGG
ACTGACGAGCGAATACTTATTCCGGGACACATTCAAGGCAAGCTCTCCTT
CCCTTAAGCACATACGAGGAGGTACAGACAGAGAAGACGAAGAAGGGACT
GACGAGCGAATACTTATTCCGGGACACATTCAAGGCAAGCTCTCCTTCCC
TTAAGCACGAGAGCCTCCGGAAACGGAAGTTCAAGGGGTGGCCAAAGGGA
CCCGATGGTCAACCGGCACTTCAGGATGCATTTGGGGGCGACGTCAATGC
GATGACCAGGATTATCGCTAAGCGACCTCTCTCGGAGAGCGCGATGGACG
CGGTTTTCGATACCTTCGCAGGCAGTCCGTTGTCGATTGTCGCAGACAGG
CAAGAAACGGCCAGCAGATTCTTCGCGCGCGTGAGAGCCTCCGGAAACGG
AAGTTCAAGGGGTGGCCAAAGGGACCCGATGGTCAACCGGCACTTCAGGA
TGCATTTGGGGGCGACGTCAATGCGATGACCAGGATTATCGCTAAGCGAC
CTCTCTCGGAGAGCGCGATGGACGCGGTTTTCGATACCTTCGCAGGCAGT
CCGTTGTCGATTGTCGCAGACAGGCAAGAAACGGCCAGCAGATTCTTCGC
GCGCGTGTTTAAGGTGGAAAATCAGTTAGAAAAGTGGCGCAAGGACAGTA
CGTTCGACGTCAGGGGATTTGAACAGGGCCTCCTTGTGGGACGCTTGCTG
TTTAAGGTGGAAAATCAGTTAGAAAAGTGGCGCAAGGACAGTACGTTCGA
CGTCAGGGGATTTGAACAGGGCCTCCTTGTGGGACGCTTGCTGTTTCTTT
TCACGATTGTGACTGTGATCGCCTTGGAGCTTGCTGGATACGGCGTGTTC
TTCATCGAGCCGATCATCACCCGGTTTCTTTTCACGATTGTGACTGTGAT
CGCCTTGGAGCTTGCTGGATACGGCGTGTTCTTCATCGAGCCGATCATCA
CCCGGTACGGAAACCCCTTGTCGTTCTTGGGTTTCTTATCTCCTTGAGTA
CGGAAACCCCTTGTCGTTCTTGGGTTTCTTATCTCCTTGA
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