prot_H-elongata_contig159870.3854.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig159870.3854.1
Unique Nameprot_H-elongata_contig159870.3854.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length51
Homology
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BLAST of mRNA_H-elongata_contig159870.3854.1 vs. uniprot
Match: D8LTR5_ECTSI (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTR5_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 1.990e-21
Identity = 40/52 (76.92%), Postives = 49/52 (94.23%), Query Frame = 0 
Query:    1 MAVLRIGTQEVRSRYA-RADGNPAWREKLMLCWDGNMPLNLDVYGGKEHIGQ 51
            MAVLRIG QEVRS+++ R+DG+P+W EKLMLCWDGNMPLN+D+YGGK+HIGQ
Sbjct:  335 MAVLRIGGQEVRSKWSKRSDGSPSWSEKLMLCWDGNMPLNIDIYGGKDHIGQ 386
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BLAST of mRNA_H-elongata_contig159870.3854.1 vs. uniprot
Match: A0A6H5L6N3_9PHAE (Arf-GAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N3_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.670e-17
Identity = 34/46 (73.91%), Postives = 43/46 (93.48%), Query Frame = 0 
Query:    7 GTQEVRSRYAR-ADGNPAWREKLMLCWDGNMPLNLDVYGGKEHIGQ 51
            G QEVRS++++ +DG+P+W EKLMLCWDGNMPLN+DVYGGK+HIGQ
Sbjct:  371 GGQEVRSKWSKKSDGSPSWSEKLMLCWDGNMPLNIDVYGGKDHIGQ 416
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig159870.3854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LTR5_ECTSI1.990e-2176.92Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5L6N3_9PHAE1.670e-1773.91Arf-GAP domain-containing protein n=1 Tax=Ectocarp... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig159870contigH-elongata_contig159870:355..1206 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig159870.3854.1mRNA_H-elongata_contig159870.3854.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig159870 343..1206 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig159870.3854.1 ID=prot_H-elongata_contig159870.3854.1|Name=mRNA_H-elongata_contig159870.3854.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=51bp
MAVLRIGTQEVRSRYARADGNPAWREKLMLCWDGNMPLNLDVYGGKEHIG
Q
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