prot_H-elongata_contig15967.3846.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig15967.3846.1
Unique Nameprot_H-elongata_contig15967.3846.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length526
Homology
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 552 bits (1422), Expect = 1.050e-189
Identity = 302/542 (55.72%), Postives = 359/542 (66.24%), Query Frame = 0
Query:    1 AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQTITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDV----VIERTKKPRA-AHTISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVCL-DNFEKIERATADETDDASASYCTLPA----ADESTSTCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIXXXXXXXXXXXXXXXXXXXXXXXXXFGSSFVRAVRRINKKRDAEMDLELETNVA-SAFPESPTAG--GGGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQAGSFALGG----------GELDKIALGDVSSVMTAQSTPS----------VLGAKASPSAPRSTVLDERIVKQGLNTSDV 509
            AEQ+LVASLVDDI Y D++ +G C  GC R E AVAH+T TP+  +C LQT++PFDSSTPEPGLLRA IYCEDS+G LIE+GT PCVFD+CVDFSW   D     +LTY+      ++  ++P A    ISMTDEYGDGWVGGV GYYNTW LT++T D+V   GTLADNHESAT  ECL DG+Y+FNTTA +AFADDMGWGICD  G  GEGLKFT+ +G C  ++ E I RATA+ET DA  SYC LPA     D  TSTC+ LSSG+KIDGVGL+YD+RC  A Y+GC ARSI  CR+CF D+D W   FP+ RVPDWE CPCCVAD +G+DCA+GGG  G                          FG + VR +RR+ KK+ AE  L+L+ +   SAFPESP  G  G G T+RG V  +  R RG SGHFPIPRFDSIRGRFDSGIFASN GG        +G           GEL+KI+    +   TAQSTPS              KA  +APRSTVLD R+V QG  T+D+
Sbjct:   22 AEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEFNGTCEVQTCEEPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASGGG-GGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHPGTSAFPESPGGGMGGSGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGGXXXXXXGVGARAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANXXXXXXXXXXXKAG-NAPRSTVLDGRLVAQGYTTTDM 561          
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.270e-157
Identity = 246/444 (55.41%), Postives = 286/444 (64.41%), Query Frame = 0
Query:    1 AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQTITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHTI-----------------------------------------SMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVCL-DNFEKIERATADETDDASASYCTLPAA----DESTSTCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIXXXXXXXXXXXXXXXXXXXXXXXXXFGSSFVRAVRRINKKRDAEMDLELETNVA-SAFPESPT 397
            AEQILVASLVDDI YAD++ +G C  GC R E AVAH+T TP+  +C+LQT++PFDSSTPEPGLLRA IYCEDS+G LIE+GT PCVFD+CVDFSW   D     +LTY+V +ER  KP A HTI                                         SMTDEYGDGWVGGV GYYNTW LT++T D+V   GTLADNHESAT  ECL DG+Y+FNTTA +AFADDMGWGICD  G  GEGLKFT+ +G C  ++ E I RATA+ET DA  SYC LPA     D  TSTC+ LSSG+KIDGVGL+YD+RC  A Y+GC ARSI  CR+CF D+D W   FPN RVPDWE CPCCVAD +G+DCA+GGG  G                          FG + VR  RR   KR  E DL++   +  SAFPESPT
Sbjct:  130 AEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGG-GGTDDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFRRFQNKRLDEEDLDMAGVLGTSAFPESPT 572          
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5KLX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.060e-51
Identity = 138/388 (35.57%), Postives = 182/388 (46.91%), Query Frame = 0
Query:    6 VASLVDDIVYADLISTGDCHSGCRR-----EEHAVAHITETPEVSNCELQTITPFDSSTPEP--GLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHT-------------------------------------------------ISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVC--LDNFEKI-ERATADETDDASASYCTLPAADESTSTCSTLSSGL-KIDG--VGLYYDERCTRAQYA--GCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATG 329
            + S  D IV AD+   G C +GC R     E +A   +       +CEL+     D +  +   G L     C ++ G L+ +  G C++ +CV   WK      G  LTY VV+E  + P AAHT                                                 I+ TDEYGDGWVGG+    NTW+LT+ +  SVV  GTL D H S  T  CL DGDY F TTA+AA++ +  W +C+ +G  G  L F + +  C  LD+  K    AT  ET  +   +C LPA D     C  L  G+ ++ G  VG+YYDE C        GCG   +  CRICFV+R+ W   FP+ER PDW DCPCCVAD + V C  G
Sbjct:   56 LGSTSDAIVAADIEPGGPCDAGCVRTVVNAEVYAAGEV-------DCELRVENLLDHTDEDVLGGSLNVVHSCTNAAGDLLYQDQGECLYSVCVTAEWK------GELLTYTVVVEHAE-PSAAHTVLIEVYMNEYEDLLDRPDVTVVSDSSVLCELGTSCADSSACPSGYSELVITTTDEYGDGWVGGLPDRSNTWTLTDASSSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTADAAWSSESAWNVCEVDGGMGGSLDFEMSNSACNVLDSSSKDGPPATVAET--SLGDFCALPADDP----CVDLDVGVAEVRGPSVGMYYDESCLEGGGGDTGCGGGGVTVCRICFVNREFWLADFPDERYPDWLDCPCCVADALVVTCQAG 423          
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: D7G003_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G003_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.760e-50
Identity = 122/328 (37.20%), Postives = 158/328 (48.17%), Query Frame = 0
Query:   63 GLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHT-------------------------------------------------ISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVC--LDNFEKIERATADETDDASASYCTLPAADESTSTCSTLSSGL-KIDG--VGLYYDERCTRAQ--YAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSG 334
            G L     C ++ G L+ +  G C++ +CV   WK      G  LTY VV+E  + P AAHT                                                 I+ TDEYGDGWVGG+    NTW+LT+    SVV  GTL D H S  T  CL DGDY F TTA  A++ D  W +C+ +G  G  L+F +    C  LD+  K +   A + + +S   C LPA D     C     G+ ++ G  VG+YYDE C        GCG   +  CRICFV+R+ W   FP+ER PDW DCPCCVAD +GV C  GGG++G
Sbjct:   15 GSLNVVHSCTNAEGDLLYQDQGECLYSVCVTAEWK------GELLTYTVVVEHAE-PSAAHTVLVEVYMNEYQDLLDRPDVTVVADSSVLCELGTSCAASSACPSGYSELVITTTDEYGDGWVGGLPDRSNTWALTDAASSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTAYTAWSSDSAWNVCEVDGGMGGSLEFEVSSSACNVLDSSSK-DGPPATDAETSSGDLCALPADDA----CVGFDVGVAEVSGPSVGMYYDEACLEGGGGNTGCGGGGVTACRICFVNREFWLADFPDERYPDWLDCPCCVADALGVTCQ-GGGETG 329          
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5L443_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L443_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.850e-26
Identity = 79/161 (49.07%), Postives = 99/161 (61.49%), Query Frame = 0
Query:  372 INKKRDAEMDLELETNVA-SAFPESPTAGGGGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQ----AGSFALGGG---ELDKIALGDVSSVMTAQSTPSVL---------GAKASPSAPRSTVLDERIVKQGLNTSDVGHHSGS 515
            + KK+ AE  L+L+ +   SAFP+SP   GGG T+RG V  +  R RG SGHFPIPRFDSIRGRFDSGIFASN  G       AG+   GGG   EL+KI+    +   TAQSTPS           G + + +APRSTVLD R+V +G  T+D+G  + S
Sbjct:    1 MRKKKHAEDQLDLDGHPGTSAFPDSP---GGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVAGGXXXXXVAGAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANGSGVGTGGGGRKAGNAPRSTVLDGRLVAKGYTTTDMGRPTSS 158          
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.060e-6
Identity = 26/63 (41.27%), Postives = 35/63 (55.56%), Query Frame = 0
Query:  263 DGVGLYYDERCT----RAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADI 321
            +G+G YYD  C       Q  GC A +   CR+CF +   +    P+E +PD+ DCPCCV DI
Sbjct:  431 EGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDI 493          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDR3_ECTSI1.050e-18955.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE1.270e-15755.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX8_9PHAE1.060e-5135.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G003_ECTSI2.760e-5037.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L443_9PHAE3.850e-2649.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9X3_9PHAE3.060e-641.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..338
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 339..366
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 367..526
NoneNo IPR availableTMHMMTMhelixcoord: 344..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15967contigH-elongata_contig15967:997..6240 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15967.3846.1mRNA_H-elongata_contig15967.3846.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig15967 997..6240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig15967.3846.1 ID=prot_H-elongata_contig15967.3846.1|Name=mRNA_H-elongata_contig15967.3846.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=526bp
AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQ
TITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYD
EGDGGQLTYDVVIERTKKPRAAHTISMTDEYGDGWVGGVSGYYNTWSLTN
VTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICD
ENGLGGEGLKFTIEDGVCLDNFEKIERATADETDDASASYCTLPAADEST
STCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWK
KSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIDKGVIIGVSVGIVGV
IAIAVCLSCAFGSSFVRAVRRINKKRDAEMDLELETNVASAFPESPTAGG
GGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQA
GSFALGGGELDKIALGDVSSVMTAQSTPSVLGAKASPSAPRSTVLDERIV
KQGLNTSDVGHHSGSLSFGGGGGGGG
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