mRNA_H-elongata_contig15967.3846.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig15967.3846.1
Unique NamemRNA_H-elongata_contig15967.3846.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: D8LDR3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDR3_ECTSI)

HSP 1 Score: 552 bits (1422), Expect = 1.050e-189
Identity = 302/542 (55.72%), Postives = 359/542 (66.24%), Query Frame = 1 
Query:    1 AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQTITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDV----VIERTKKPRA-AHTISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVCL-DNFEKIERATADETDDASASYCTLPA----ADESTSTCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIXXXXXXXXXXXXXXXXXXXXXXXXXFGSSFVRAVRRINKKRDAEMDLELETNVA-SAFPESPTAG--GGGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQAGSFALGG----------GELDKIALGDVSSVMTAQSTPS----------VLGAKASPSAPRSTVLDERIVKQGLNTSDV 1527
            AEQ+LVASLVDDI Y D++ +G C  GC R E AVAH+T TP+  +C LQT++PFDSSTPEPGLLRA IYCEDS+G LIE+GT PCVFD+CVDFSW   D     +LTY+      ++  ++P A    ISMTDEYGDGWVGGV GYYNTW LT++T D+V   GTLADNHESAT  ECL DG+Y+FNTTA +AFADDMGWGICD  G  GEGLKFT+ +G C  ++ E I RATA+ET DA  SYC LPA     D  TSTC+ LSSG+KIDGVGL+YD+RC  A Y+GC ARSI  CR+CF D+D W   FP+ RVPDWE CPCCVAD +G+DCA+GGG  G                          FG + VR +RR+ KK+ AE  L+L+ +   SAFPESP  G  G G T+RG V  +  R RG SGHFPIPRFDSIRGRFDSGIFASN GG        +G           GEL+KI+    +   TAQSTPS              KA  +APRSTVLD R+V QG  T+D+
Sbjct:   22 AEQVLVASLVDDITYTDIVPSGTCADGCVRYEQAVAHVTGTPDQLDCGLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEFNGTCEVQTCEEPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDVDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWLSRFPSSRVPDWELCPCCVADTLGIDCASGGG-GGTDEGVIIGVSVGIAGVIAIACCLSCAFGPTIVRFLRRMRKKKHAEDQLDLDGHPGTSAFPESPGGGMGGSGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVGGGXXXXXXGVGARAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANXXXXXXXXXXXKAG-NAPRSTVLDGRLVAQGYTTTDM 561
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5L5M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M6_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.270e-157
Identity = 246/444 (55.41%), Postives = 286/444 (64.41%), Query Frame = 1 
Query:    1 AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQTITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHTI-----------------------------------------SMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVCL-DNFEKIERATADETDDASASYCTLPAA----DESTSTCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIXXXXXXXXXXXXXXXXXXXXXXXXXFGSSFVRAVRRINKKRDAEMDLELETNVA-SAFPESPT 1191
            AEQILVASLVDDI YAD++ +G C  GC R E AVAH+T TP+  +C+LQT++PFDSSTPEPGLLRA IYCEDS+G LIE+GT PCVFD+CVDFSW   D     +LTY+V +ER  KP A HTI                                         SMTDEYGDGWVGGV GYYNTW LT++T D+V   GTLADNHESAT  ECL DG+Y+FNTTA +AFADDMGWGICD  G  GEGLKFT+ +G C  ++ E I RATA+ET DA  SYC LPA     D  TSTC+ LSSG+KIDGVGL+YD+RC  A Y+GC ARSI  CR+CF D+D W   FPN RVPDWE CPCCVAD +G+DCA+GGG  G                          FG + VR  RR   KR  E DL++   +  SAFPESPT
Sbjct:  130 AEQILVASLVDDITYADIVPSGTCADGCVRYEQAVAHVTGTPDQLDCDLQTVSPFDSSTPEPGLLRALIYCEDSSGTLIEQGTRPCVFDVCVDFSWSSGDXXXXXELTYEVRVERDSKPSAPHTIYVDLSVAIDPTSTNTNADSCQYNGTCEVQTCEAPNAYGAVISMTDEYGDGWVGGVDGYYNTWQLTDLTTDTVWSKGTLADNHESATIKECLADGEYMFNTTATSAFADDMGWGICDNYGAAGEGLKFTVLNGACDGESAELIARATAEETSDAGDSYCVLPAPESDEDYRTSTCTALSSGMKIDGVGLFYDDRCNSADYSGCFARSIPACRLCFWDKDLWMSRFPNSRVPDWELCPCCVADTLGIDCASGGG-GGTDDGVIIGISVGIAGVIAIACCLSCAFGPTIVRFFRRFQNKRLDEEDLDMAGVLGTSAFPESPT 572
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5KLX8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX8_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.060e-51
Identity = 138/388 (35.57%), Postives = 182/388 (46.91%), Query Frame = 1 
Query:   16 VASLVDDIVYADLISTGDCHSGCRR-----EEHAVAHITETPEVSNCELQTITPFDSSTPEP--GLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHT-------------------------------------------------ISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVC--LDNFEKI-ERATADETDDASASYCTLPAADESTSTCSTLSSGL-KIDG--VGLYYDERCTRAQYA--GCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATG 987
            + S  D IV AD+   G C +GC R     E +A   +       +CEL+     D +  +   G L     C ++ G L+ +  G C++ +CV   WK      G  LTY VV+E  + P AAHT                                                 I+ TDEYGDGWVGG+    NTW+LT+ +  SVV  GTL D H S  T  CL DGDY F TTA+AA++ +  W +C+ +G  G  L F + +  C  LD+  K    AT  ET  +   +C LPA D     C  L  G+ ++ G  VG+YYDE C        GCG   +  CRICFV+R+ W   FP+ER PDW DCPCCVAD + V C  G
Sbjct:   56 LGSTSDAIVAADIEPGGPCDAGCVRTVVNAEVYAAGEV-------DCELRVENLLDHTDEDVLGGSLNVVHSCTNAAGDLLYQDQGECLYSVCVTAEWK------GELLTYTVVVEHAE-PSAAHTVLIEVYMNEYEDLLDRPDVTVVSDSSVLCELGTSCADSSACPSGYSELVITTTDEYGDGWVGGLPDRSNTWTLTDASSSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTADAAWSSESAWNVCEVDGGMGGSLDFEMSNSACNVLDSSSKDGPPATVAET--SLGDFCALPADDP----CVDLDVGVAEVRGPSVGMYYDESCLEGGGGDTGCGGGGVTVCRICFVNREFWLADFPDERYPDWLDCPCCVADALVVTCQAG 423
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: D7G003_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G003_ECTSI)

HSP 1 Score: 196 bits (498), Expect = 2.760e-50
Identity = 122/328 (37.20%), Postives = 158/328 (48.17%), Query Frame = 1 
Query:  187 GLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYDEGDGGQLTYDVVIERTKKPRAAHT-------------------------------------------------ISMTDEYGDGWVGGVSGYYNTWSLTNVTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICDENGLGGEGLKFTIEDGVC--LDNFEKIERATADETDDASASYCTLPAADESTSTCSTLSSGL-KIDG--VGLYYDERCTRAQ--YAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADIVGVDCATGGGDSG 1002
            G L     C ++ G L+ +  G C++ +CV   WK      G  LTY VV+E  + P AAHT                                                 I+ TDEYGDGWVGG+    NTW+LT+    SVV  GTL D H S  T  CL DGDY F TTA  A++ D  W +C+ +G  G  L+F +    C  LD+  K +   A + + +S   C LPA D     C     G+ ++ G  VG+YYDE C        GCG   +  CRICFV+R+ W   FP+ER PDW DCPCCVAD +GV C  GGG++G
Sbjct:   15 GSLNVVHSCTNAEGDLLYQDQGECLYSVCVTAEWK------GELLTYTVVVEHAE-PSAAHTVLVEVYMNEYQDLLDRPDVTVVADSSVLCELGTSCAASSACPSGYSELVITTTDEYGDGWVGGLPDRSNTWALTDAASSSVVAEGTLHDWHFSGMTKLCLQDGDYSFETTAYTAWSSDSAWNVCEVDGGMGGSLEFEVSSSACNVLDSSSK-DGPPATDAETSSGDLCALPADDA----CVGFDVGVAEVSGPSVGMYYDEACLEGGGGNTGCGGGGVTACRICFVNREFWLADFPDERYPDWLDCPCCVADALGVTCQ-GGGETG 329
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5L443_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L443_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 3.850e-26
Identity = 79/161 (49.07%), Postives = 99/161 (61.49%), Query Frame = 1 
Query: 1114 INKKRDAEMDLELETNVA-SAFPESPTAGGGGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQ----AGSFALGGG---ELDKIALGDVSSVMTAQSTPSVL---------GAKASPSAPRSTVLDERIVKQGLNTSDVGHHSGS 1545
            + KK+ AE  L+L+ +   SAFP+SP   GGG T+RG V  +  R RG SGHFPIPRFDSIRGRFDSGIFASN  G       AG+   GGG   EL+KI+    +   TAQSTPS           G + + +APRSTVLD R+V +G  T+D+G  + S
Sbjct:    1 MRKKKHAEDQLDLDGHPGTSAFPDSP---GGGNTLRGAVLTHGNRDRGRSGHFPIPRFDSIRGRFDSGIFASNVAGGXXXXXVAGAHVGGGGPSGELEKISAEQANVSTTAQSTPSGANGSGVGTGGGGRKAGNAPRSTVLDGRLVAKGYTTTDMGRPTSS 158
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BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Match: A0A6H5J9X3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9X3_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 3.060e-6
Identity = 26/63 (41.27%), Postives = 35/63 (55.56%), Query Frame = 1 
Query:  787 DGVGLYYDERCT----RAQYAGCGARSIEGCRICFVDRDQWKKSFPNERVPDWEDCPCCVADI 963
            +G+G YYD  C       Q  GC A +   CR+CF +   +    P+E +PD+ DCPCCV DI
Sbjct:  431 EGIGDYYDPACELVEGEEQLGGCNADASSLCRMCFFNTPLYVAKHPDEDLPDYPDCPCCVLDI 493
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig15967.3846.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LDR3_ECTSI1.050e-18955.72Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L5M6_9PHAE1.270e-15755.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX8_9PHAE1.060e-5135.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G003_ECTSI2.760e-5037.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L443_9PHAE3.850e-2649.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9X3_9PHAE3.060e-641.27Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig15967contigH-elongata_contig15967:997..6240 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size1578
Cds size1578
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig15967.3846.1prot_H-elongata_contig15967.3846.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig15967 997..6240 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929938.9309013-CDS-H-elongata_contig15967:996..14701622929938.9309013-CDS-H-elongata_contig15967:996..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 997..1470 -
1691679215.6572626-CDS-H-elongata_contig15967:996..14701691679215.6572626-CDS-H-elongata_contig15967:996..1470Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 997..1470 -
1622929938.94524-CDS-H-elongata_contig15967:1705..21931622929938.94524-CDS-H-elongata_contig15967:1705..2193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 1706..2193 -
1691679215.675621-CDS-H-elongata_contig15967:1705..21931691679215.675621-CDS-H-elongata_contig15967:1705..2193Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 1706..2193 -
1622929938.9647267-CDS-H-elongata_contig15967:2723..29671622929938.9647267-CDS-H-elongata_contig15967:2723..2967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 2724..2967 -
1691679215.6845837-CDS-H-elongata_contig15967:2723..29671691679215.6845837-CDS-H-elongata_contig15967:2723..2967Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 2724..2967 -
1622929938.9795077-CDS-H-elongata_contig15967:5868..62401622929938.9795077-CDS-H-elongata_contig15967:5868..6240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 5869..6240 -
1691679215.6923833-CDS-H-elongata_contig15967:5868..62401691679215.6923833-CDS-H-elongata_contig15967:5868..6240Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig15967 5869..6240 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig15967.3846.1

>prot_H-elongata_contig15967.3846.1 ID=prot_H-elongata_contig15967.3846.1|Name=mRNA_H-elongata_contig15967.3846.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=526bp
AEQILVASLVDDIVYADLISTGDCHSGCRREEHAVAHITETPEVSNCELQ
TITPFDSSTPEPGLLRASIYCEDSTGALIEEGTGPCVFDICVDFSWKDYD
EGDGGQLTYDVVIERTKKPRAAHTISMTDEYGDGWVGGVSGYYNTWSLTN
VTDDSVVRSGTLADNHESATTLECLGDGDYIFNTTANAAFADDMGWGICD
ENGLGGEGLKFTIEDGVCLDNFEKIERATADETDDASASYCTLPAADEST
STCSTLSSGLKIDGVGLYYDERCTRAQYAGCGARSIEGCRICFVDRDQWK
KSFPNERVPDWEDCPCCVADIVGVDCATGGGDSGIDKGVIIGVSVGIVGV
IAIAVCLSCAFGSSFVRAVRRINKKRDAEMDLELETNVASAFPESPTAGG
GGGTIRGTVNPNQARGRGNSGHFPIPRFDSIRGRFDSGIFASNTGGATQA
GSFALGGGELDKIALGDVSSVMTAQSTPSVLGAKASPSAPRSTVLDERIV
KQGLNTSDVGHHSGSLSFGGGGGGGG
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mRNA from alignment at H-elongata_contig15967:997..6240-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig15967.3846.1 ID=mRNA_H-elongata_contig15967.3846.1|Name=mRNA_H-elongata_contig15967.3846.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=5244bp|location=Sequence derived from alignment at H-elongata_contig15967:997..6240- (Himanthalia elongata Himel1 dioecious)
GCAGAACAGATCCTCGTGGCGAGCCTTGTTGATGATATTGTGTACGCCGA
TCTTATCTCGACGGGTGATTGCCACTCCGGGTGCAGGCGTGAGGAGCACG
CCGTGGCGCACATAACCGAAACTCCCGAAGTTTCTAATTGCGAGCTCCAG
ACCATTACCCCCTTCGACTCTTCGACCCCAGAGCCAGGGCTCCTACGAGC
TTCTATCTACTGTGAAGACTCGACTGGGGCGCTAATCGAGGAGGGCACGG
GGCCATGCGTTTTTGATATTTGCGTGGACTTCTCGTGGAAGGACTATGAT
GAAGGAGATGGTGGGCAGCTCACGTACGACGTCGTGATCGAAAGGACAAA
GAAGCCTCGTGCGGCACACACGGTGTACATCGATCTCTCCGTTGCAATCG
ACCCAACCGCCTCCAACACCAATGTGGACTCGTGTGCCGCCAATGGAACG
TGTGCCAGCACGATCTGCGATGCCCCATTTCCCTACACCGCCACTGTGAG
TACTGCGTGCGCAATCTAATCGAATTATGCGTACATACTAGGGTTGTGTG
TTGTTTACATCCTCTTGTTTACTTTCCGAAAAATCAAAAGCCTGGACGCC
AAAGAGAAGGGAGCAGTGATGCGATAACTCTTCGGAGGTGGGTGGGAGAG
TCGTTAGTTTACTGGTCCCTTTTTTCTAAAATGTGAGAGGACTTTGTGCG
ATTTGAGGGCGTCTGTCCTCGAGACTTCGTTTTTTCCAATCTAAAGTCTG
GAAAATTACTTTGTTCGATCTCCCCAGCCGTGGGTTCTTGTGTTGATGCG
TGTCTGGTGAGAGTGGATGTGTTGCGGCATCCTAGTTGCTGGCAACTCTC
CAACCATGCAGGAGCATTTGATGTGCCTCCTATCTGGTTATATGAAGGGA
AGTTCTCTGGTGTTTATAGCGGTAGCACGTTTCCTCTCTCCTGTTTTACA
TAAACAAAAATACCCCGTCTAGACCCAATATATTTCTTATCGATAAAGCA
TTATGACTGCGTTTCAAGTTTTATATTCATATTCAAATTAGGCTTTAAAA
AACCCCATCGAGTTCCAATGGAGTTAAGAATACGTTGATCTGTTTGTAAA
GTTATAAGCCGTTTTATCTCTCGAGATTTTTGTTTCACTACTGCAGACTC
AAGTGTGGAGTCCTCTCGACCTTGCTCAATTCAGTCGCCACCCTCAGCTT
CAAATATGTTTTTTCCGAGAATCCCTTTAATTGGTAATGGTCGCCGTTGT
TCCAGCGTAAGCCTTCGAAGTAGGTTTCCGCCCACCCCGACGCTCGTCGT
ATTTTACTCCGAATTTACAACAGACCCCAGAATGCTCAAAGAGAGTTTGA
ATTTCAAGTATTTTAACAAGAAAAATAGAGCTAGACTAGTCCATACAATC
GCTATTTTACCATTTTTGATTCTTAACCCCTCTGGAACTGGATTTGAAGT
TTTCTATTGAATTGAACATATAAAAAGCAGATTGAGTTCCATAGGGGTTT
AATTGCCCTTTCTTTTATGATCGAAGTTCTAGGAACCGACCTCGAAGTGA
ATAAGTAATGCAACAACATGCTATGTAACTAGGGCATGACTTACAATATT
AGCCTTTCTTTCCTTGTAAATGGTGAGGTGACTGTAGCGAGGAGCCCGTG
GACGCCCTGGCGAAATCTGAGACCGACATCAGAATTGTCAAAATAAGTTT
TATCTATAAATACGTGTTTGAACTGATGACCTAGTTTACAGCCGTATCAA
AAAATCATACGCTGCATTCTTGTTTTCAAAAGAACCAAGGATAAGTTACT
GGAAGGGCTCAACCGATTTTTGCGTTTACAGTAATTAATAGTTGCAACAT
TTGTGCACAAGGTGGTCAAGAGGTCGTCGAGACGTTAGCGTCTCCGCCCT
CCAGATCTCTGATGACTCTACCTCAACGACCAACCTGGGTGGAGCTGACC
CTGTAATCGAACCATTTGGAATTGTACCGCTCCAGTGCTTTCTTGAAGAC
AGCAGTCGTCATGAGCAATCAATTGGTTAGGCAGGCGGGGGGCATGTGAT
GCTAGACAGCTCGTACATTCGATCAACACTACCGATCAAGTTTCAGGGGA
CCTGGCCCGTTTGAGATCTCGTTACGCCTCCTATTACGATCACAAGTCTC
TGTATGTCAGCCTGAGAGCACTTGTTGCAGCTTTGTTACTAAGCTCAAAA
AGCCTTTTCGTTGCGTTGGTTCCGTTTTCGGAGAGCTCACAAATAGCTTT
TTTTCTTTTCTTTTAATCGCTGCTTGTGAATCATCGATAGGTTTAGCTAT
AAATTTTAGTCTATTTCCGAGTTCGTGGTAGAATGATATTCGTATATTAT
CAAGCCTCATATTCAATCAACGAGACAACATTTTCTTTGTAAAAGTCTAA
AATCGCGATAAATATAAATATCTCTTGAGTTGTTAAAAATATATATATAT
TCATACTATAGTTTACCCAAGACATCCAAAACATCTATTATAGAGGAATA
GTTCTATATAAAGGACATTATGAATAAATAAAAGTATCTCGTGTGTTAAT
TGTCAATTGTGTAATATACTGAGATTATTTAGGCAACCAGCAAAAAGGAA
AGGAAAATGTATCACCCTCTCCCCTTTCTACTAATAAATACTATAAATTA
AGTACGCTATTCATACTACTTTTGACCGAGACCTGCCTCAGTACATCGAA
AGACGTCACTGGCACCTGCTGTGGCAGCCGAGTCTGCGTCGAACCCCTCC
GTCCCGTCCACACGCCCCGCGACTGGTTTTTCCGTCTGGTCCATCACACG
TTAGCGACGAAAACCGTGAAATGTGTGTTGGCACTGCTGGTGTAGATCCG
TTGAGCAAAACTTTTCGCCTCGAGGTTTATTCTTCAGCCTCTGAACGTAT
TGCCCGCGGGAACCAGCGGACATGAGCCCGATAATTATTCGGCGTAGGAA
GAATTCTTGGCACGAGTGCCTATTTTTTTTTTTTTTTTTTTTATGGCACT
TTTGGGGTTGTTTATAATTTTCTTAAGGCGGGCCCGGCGTTTGCGATGAC
TCCTGGCTTGTGAGCACCGCGGTTCAAAAGGAATCTTGAGCAAGAAAACA
CTACGGAAGAGTATAAACAAATATAGCTTTTAAGAGCATATATAATCGGT
ATCGATCTTGCAACCCAGTAAGAGTCGTTCTAAGAAGCACTTCTTCCGTG
TTGTGTCTTTAGCGATTTTTACTAACTCCTCGTGCCCCCTGCTCGTGCGT
CTCCCACGCGCCGCCTCAAACAGATTTCCATGACGGATGAGTATGGTGAC
GGATGGGTCGGCGGGGTCTCCGGTTACTACAACACATGGAGCCTCACTAA
CGTAACAGACGACTCGGTAGTGAGGAGCGGAACCCTCGCCGACAATCACG
AAAGCGCCACGACCCTGGAGTGCCTCGGAGACGGCGATTACATCTTCAAC
ACGACGGCAAACGCAGCTTTCGCCGATGACATGGGCTGGGGCATCTGCGA
TGAAAATGGCCTCGGCGGTAAGAGCCGGGGGAAGGAGAAAGAAATAAGCG
TCAAACGAACGATTCGAGCGATAACGCGCGTTTGTTTCCCGAGTGCGACA
GGAGGTTAAGATGGCATAGAGTCAAGTCAGCACCCTCGGGTGGTACACAA
ACGTAAAACTGGTTACTTTTTTTCTGCGGGCAAACAAAAGATTGGGGTTG
GGATTGTTTGCAACTAACGTTTGGGTAAATAGGCGGTGCATCTTATCGTC
GATCCGAAGAGGTCCAGAAGATTTATTTATTTATTGTCCCCAAGTTCGAT
TTGGTGTCAGACGCACCCGACACTTCAATGTCCAACATGCCTCAGTAGAC
CTTCAACGACAACATGAAACCAGGCGACGGATTTTACCCAGCGTTTTTGC
CGCCTCAGTGTAAAGAGTGCACACACGCTACTGTAGGAGGCGCTTCTATG
GGGGGATACAAGACGAAATAGAAGTAGGGGGAAAACATAACCCACGTGTT
GCCCGTTACTTGCCTGCGTCGCCACTCAACACACCTACGATCCACAGGTG
AGGGCTTGAAGTTCACCATCGAGGATGGCGTTTGCTTAGACAACTTTGAG
AAGATCGAGCGCGCCACCGCAGACGAGACGGACGACGCTTCCGCCTCGTA
TTGTACACTTCCCGCGGCGGATGAGAGCACTTCAACGTGCTCCACCCTGT
CCTCGGGCCTCAAGATCGACGGCGTGGGCCTCTACTACGACGAGCGCTGC
ACCAGGGCACAGTACGCCGGGTGCGGTGCGCGGTCGATCGAAGGCTGTCG
CATTTGCTTCGTCGACAGGGATCAGTGGAAGAAGAGCTTCCCTAACGAGC
GTGTACCCGACTGGGAGGACTGCCCATGCTGCGTGGCTGACATCGTAGGA
GTAGATTGCGCCACCGGCGGCGGCGACAGCGGAATTGATAAGGGTGTTAT
AATCGGCGTCAGCGTCGGGATCGTCGGTGTCATCGCGATCGCTGTCTGCC
TGTCGTGCGCCTTCGGAAGCTCCTTTGTCCGGGCCGTGAGTACTCTTTTA
TCTATAGTCGTTGTGTAAAGAGTTGGTTCGTTCGGCGATGTCCCCCGAGA
TCTGAACCATCGTACCCTTCCCACCAGATTAATGTATAAGGCAGACCCTA
CACGTAGCTCGCCAGTGATCGCTCGCTTCGCCGCCTTGGTTGGCAAACGC
CTTTACCCTCCTCCATATTTGCTTCCATAAAACTAATCAACGAAATTGGA
TTGGTATATGAACGGGACAGGTCCGCCGTATAAACAAGAAGAGGGACGCC
GAAATGGACCTCGAGCTCGAGACCAACGTCGCCAGCGCTTTCCCAGAGTC
CCCTACGGCAGGTGGCGGAGGAGGTACTATCCGTGGCACGGTAAACCCCA
ACCAGGCTCGCGGCCGCGGAAACTCGGGCCATTTCCCCATCCCGCGCTTC
GACTCCATCCGTGGCCGCTTCGATTCGGGAATATTTGCGTCCAACACAGG
AGGGGCAACTCAGGCAGGATCGTTTGCGTTGGGTGGCGGTGAATTGGACA
AGATTGCGTTAGGAGACGTCTCGAGTGTCATGACTGCACAGTCGACGCCG
TCGGTCCTCGGAGCCAAGGCCTCCCCCAGTGCCCCGCGCTCGACCGTGCT
CGACGAGCGTATTGTAAAGCAGGGGCTGAACACGAGCGATGTAGGACACC
ATTCCGGTTCGCTTTCCTTCGGGGGAGGAGGAGGCGGTGGCGGA
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Coding sequence (CDS) from alignment at H-elongata_contig15967:997..6240-

>mRNA_H-elongata_contig15967.3846.1 ID=mRNA_H-elongata_contig15967.3846.1|Name=mRNA_H-elongata_contig15967.3846.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=3156bp|location=Sequence derived from alignment at H-elongata_contig15967:997..6240- (Himanthalia elongata Himel1 dioecious)
GCAGAACAGATCCTCGTGGCGAGCCTTGTTGATGATATTGTGTACGCCGA
TCTTATCTCGACGGGTGATTGCCACTCCGGGTGCAGGCGTGAGGAGCACG
CCGTGGCGCACATAACCGAAACTCCCGAAGTTTCTAATTGCGAGCTCCAG
ACCATTACCCCCTTCGACTCTTCGACCCCAGAGCCAGGGCTCCTACGAGC
TTCTATCTACTGTGAAGACTCGACTGGGGCGCTAATCGAGGAGGGCACGG
GGCCATGCGTTTTTGATATTTGCGTGGACTTCTCGTGGAAGGACTATGAT
GAAGGAGATGGTGGGCAGCTCACGTACGACGTCGTGATCGAAAGGACAAA
GAAGCCTCGTGCGGCACACACGGCAGAACAGATCCTCGTGGCGAGCCTTG
TTGATGATATTGTGTACGCCGATCTTATCTCGACGGGTGATTGCCACTCC
GGGTGCAGGCGTGAGGAGCACGCCGTGGCGCACATAACCGAAACTCCCGA
AGTTTCTAATTGCGAGCTCCAGACCATTACCCCCTTCGACTCTTCGACCC
CAGAGCCAGGGCTCCTACGAGCTTCTATCTACTGTGAAGACTCGACTGGG
GCGCTAATCGAGGAGGGCACGGGGCCATGCGTTTTTGATATTTGCGTGGA
CTTCTCGTGGAAGGACTATGATGAAGGAGATGGTGGGCAGCTCACGTACG
ACGTCGTGATCGAAAGGACAAAGAAGCCTCGTGCGGCACACACGATTTCC
ATGACGGATGAGTATGGTGACGGATGGGTCGGCGGGGTCTCCGGTTACTA
CAACACATGGAGCCTCACTAACGTAACAGACGACTCGGTAGTGAGGAGCG
GAACCCTCGCCGACAATCACGAAAGCGCCACGACCCTGGAGTGCCTCGGA
GACGGCGATTACATCTTCAACACGACGGCAAACGCAGCTTTCGCCGATGA
CATGGGCTGGGGCATCTGCGATGAAAATGGCCTCGGCGATTTCCATGACG
GATGAGTATGGTGACGGATGGGTCGGCGGGGTCTCCGGTTACTACAACAC
ATGGAGCCTCACTAACGTAACAGACGACTCGGTAGTGAGGAGCGGAACCC
TCGCCGACAATCACGAAAGCGCCACGACCCTGGAGTGCCTCGGAGACGGC
GATTACATCTTCAACACGACGGCAAACGCAGCTTTCGCCGATGACATGGG
CTGGGGCATCTGCGATGAAAATGGCCTCGGCGGTGAGGGCTTGAAGTTCA
CCATCGAGGATGGCGTTTGCTTAGACAACTTTGAGAAGATCGAGCGCGCC
ACCGCAGACGAGACGGACGACGCTTCCGCCTCGTATTGTACACTTCCCGC
GGCGGATGAGAGCACTTCAACGTGCTCCACCCTGTCCTCGGGCCTCAAGA
TCGACGGCGTGGGCCTCTACTACGACGAGCGCTGCACCAGGGCACAGTAC
GCCGGGTGCGGTGCGCGGTCGATCGAAGGCTGTCGCATTTGCTTCGTCGA
CAGGGATCAGTGGAAGAAGAGCTTCCCTAACGAGCGTGTACCCGACTGGG
AGGACTGCCCATGCTGCGTGGCTGACATCGTAGGAGTAGATTGCGCCACC
GGCGGCGGCGACAGCGGAATTGATAAGGGTGTTATAATCGGCGTCAGCGT
CGGGATCGTCGGTGTCATCGCGATCGCTGTCTGCCTGTCGTGCGCCTTCG
GAAGCTCCTTTGTCCGGGCCGTGAGGGCTTGAAGTTCACCATCGAGGATG
GCGTTTGCTTAGACAACTTTGAGAAGATCGAGCGCGCCACCGCAGACGAG
ACGGACGACGCTTCCGCCTCGTATTGTACACTTCCCGCGGCGGATGAGAG
CACTTCAACGTGCTCCACCCTGTCCTCGGGCCTCAAGATCGACGGCGTGG
GCCTCTACTACGACGAGCGCTGCACCAGGGCACAGTACGCCGGGTGCGGT
GCGCGGTCGATCGAAGGCTGTCGCATTTGCTTCGTCGACAGGGATCAGTG
GAAGAAGAGCTTCCCTAACGAGCGTGTACCCGACTGGGAGGACTGCCCAT
GCTGCGTGGCTGACATCGTAGGAGTAGATTGCGCCACCGGCGGCGGCGAC
AGCGGAATTGATAAGGGTGTTATAATCGGCGTCAGCGTCGGGATCGTCGG
TGTCATCGCGATCGCTGTCTGCCTGTCGTGCGCCTTCGGAAGCTCCTTTG
TCCGGGCCGTCCGCCGTATAAACAAGAAGAGGGACGCCGAAATGGACCTC
GAGCTCGAGACCAACGTCGCCAGCGCTTTCCCAGAGTCCCCTACGGCAGG
TGGCGGAGGAGGTACTATCCGTGGCACGGTAAACCCCAACCAGGCTCGCG
GCCGCGGAAACTCGGGCCATTTCCCCATCCCGCGCTTCGACTCCATCCGT
GGCCGCTTCGATTCGGGAATATTTGCGTCCAACACAGGAGGGGCAACTCA
GGCAGGATCGTTTGCGTTGGGTGGCGGTGAATTGGACAAGATTGCGTTAG
GAGACGTCTCGAGTGTCATGACTGCACAGTCGACGCCGTCGGTCCTCGGA
GCCAAGGCCTCCCCCAGTGCCCCGCGCTCGACCGTGCTCGACGAGCGTAT
TGTAAAGCAGGGGCTGAACACGAGCGATGTAGGACACCATTCCGGTTCGC
TTTCCTTCGGGGGAGGAGGAGGCGGTGGCGGAGTCCGCCGTATAAACAAG
AAGAGGGACGCCGAAATGGACCTCGAGCTCGAGACCAACGTCGCCAGCGC
TTTCCCAGAGTCCCCTACGGCAGGTGGCGGAGGAGGTACTATCCGTGGCA
CGGTAAACCCCAACCAGGCTCGCGGCCGCGGAAACTCGGGCCATTTCCCC
ATCCCGCGCTTCGACTCCATCCGTGGCCGCTTCGATTCGGGAATATTTGC
GTCCAACACAGGAGGGGCAACTCAGGCAGGATCGTTTGCGTTGGGTGGCG
GTGAATTGGACAAGATTGCGTTAGGAGACGTCTCGAGTGTCATGACTGCA
CAGTCGACGCCGTCGGTCCTCGGAGCCAAGGCCTCCCCCAGTGCCCCGCG
CTCGACCGTGCTCGACGAGCGTATTGTAAAGCAGGGGCTGAACACGAGCG
ATGTAGGACACCATTCCGGTTCGCTTTCCTTCGGGGGAGGAGGAGGCGGT
GGCGGA
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